RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 JPH4Q96JJ6 628 aa10.65□□□□□ -0.7
TPM4-203ENST00000586193 MOXD2PA6NHM9 499 aa10.64□□□□□ -0.71
TPM4-203ENST00000586193 BRD1O95696 1058 aa10.64□□□□□ -0.71
TPM4-203ENST00000586193 KCNA1Q09470 495 aa10.64□□□□□ -0.71
TPM4-203ENST00000586193 NUTM1Q86Y26 1132 aa10.64□□□□□ -0.71
TPM4-203ENST00000586193 ZNF710Q8N1W2 664 aa10.64□□□□□ -0.71
TPM4-203ENST00000586193 SEC24BO95487 1268 aa10.63□□□□□ -0.71
TPM4-203ENST00000586193 CD46P15529 392 aa10.63□□□□□ -0.71
TPM4-203ENST00000586193 RTL5Q5HYW3 569 aaPredicted RBP10.63□□□□□ -0.71
TPM4-203ENST00000586193 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
TPM4-203ENST00000586193 PCDHGA4Q9Y5G9 962 aa10.63□□□□□ -0.71
TPM4-203ENST00000586193 LOC105371045A0A1W2PR82 267 aa10.62□□□□□ -0.71
TPM4-203ENST00000586193 LILRB3O75022 631 aa10.62□□□□□ -0.71
TPM4-203ENST00000586193 CSB-PGBD3P0DP91 1061 aa10.62□□□□□ -0.71
TPM4-203ENST00000586193 NDUFV2P19404 249 aa10.62□□□□□ -0.71
TPM4-203ENST00000586193 ADAMTS19Q8TE59 1207 aa10.62□□□□□ -0.71
TPM4-203ENST00000586193 COLQQ9Y215 455 aaPredicted RBP10.62□□□□□ -0.71
TPM4-203ENST00000586193 PCDHB15Q9Y5E8 787 aa10.62□□□□□ -0.71
TPM4-203ENST00000586193 CARNS1A5YM72 827 aa10.61□□□□□ -0.71
TPM4-203ENST00000586193 USP17L8P0C7I0 530 aa10.61□□□□□ -0.71
TPM4-203ENST00000586193 USTQ9Y2C2 406 aa10.61□□□□□ -0.71
TPM4-203ENST00000586193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.6□□□□□ -0.71
TPM4-203ENST00000586193 NUTM2BA6NNL0 878 aaPredicted RBP10.6□□□□□ -0.71
TPM4-203ENST00000586193 NUTM2EB1AL46 878 aaPredicted RBP10.6□□□□□ -0.71
TPM4-203ENST00000586193 FOSBP53539 338 aa10.6□□□□□ -0.71
TPM4-203ENST00000586193 PRSS12P56730 875 aa10.6□□□□□ -0.71
TPM4-203ENST00000586193 CFAP70Q5T0N1 1121 aa10.6□□□□□ -0.71
TPM4-203ENST00000586193 NUTM2DQ5VT03 806 aaPredicted RBP10.6□□□□□ -0.71
TPM4-203ENST00000586193 NUTM2AQ8IVF1 878 aaPredicted RBP10.6□□□□□ -0.71
TPM4-203ENST00000586193 RCCD1A6NED2 376 aa10.59□□□□□ -0.71
TPM4-203ENST00000586193 CLCN6P51797 869 aa10.59□□□□□ -0.71
TPM4-203ENST00000586193 E9PSI1 815 aa10.58□□□□□ -0.72
TPM4-203ENST00000586193 IGSF3O75054 1194 aa10.58□□□□□ -0.72
TPM4-203ENST00000586193 SRPK2P78362 688 aaKnown RBP10.58□□□□□ -0.72
TPM4-203ENST00000586193 C3orf67Q6ZVT6 689 aa10.58□□□□□ -0.72
TPM4-203ENST00000586193 CABLES1Q8TDN4 633 aa10.58□□□□□ -0.72
TPM4-203ENST00000586193 CDCA7LQ96GN5 454 aa10.58□□□□□ -0.72
TPM4-203ENST00000586193 NDUFB9Q9Y6M9 179 aa10.58□□□□□ -0.72
TPM4-203ENST00000586193 DDX11L8A8MPP1 907 aa10.57□□□□□ -0.72
TPM4-203ENST00000586193 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
TPM4-203ENST00000586193 GJD4Q96KN9 370 aaPredicted RBP10.57□□□□□ -0.72
TPM4-203ENST00000586193 KDM4FA0A1W2PPD8 638 aa10.56□□□□□ -0.72
TPM4-203ENST00000586193 SULF1Q8IWU6 871 aa10.56□□□□□ -0.72
TPM4-203ENST00000586193 ZNF454Q8N9F8 522 aa10.56□□□□□ -0.72
TPM4-203ENST00000586193 GJA5P36382 358 aa10.55□□□□□ -0.72
TPM4-203ENST00000586193 WASHC4Q2M389 1173 aa10.55□□□□□ -0.72
TPM4-203ENST00000586193 PPP1R12CQ9BZL4 782 aa10.55□□□□□ -0.72
TPM4-203ENST00000586193 EYA1Q99502 592 aa10.54□□□□□ -0.72
TPM4-203ENST00000586193 ADAM33Q9BZ11 813 aa10.54□□□□□ -0.72
TPM4-203ENST00000586193 FAM198AQ9UFP1 575 aa10.54□□□□□ -0.72
TPM4-203ENST00000586193 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
TPM4-203ENST00000586193 VAC14Q08AM6 782 aa10.53□□□□□ -0.72
TPM4-203ENST00000586193 POTEHQ6S545 545 aa10.53□□□□□ -0.72
TPM4-203ENST00000586193 CCDC27Q2M243 656 aa10.52□□□□□ -0.73
TPM4-203ENST00000586193 PELP1Q8IZL8 1130 aaKnown RBP10.52□□□□□ -0.73
TPM4-203ENST00000586193 PALM3A6NDB9 673 aaPredicted RBP10.51□□□□□ -0.73
TPM4-203ENST00000586193 LMOD1P29536 600 aaPredicted RBP10.51□□□□□ -0.73
TPM4-203ENST00000586193 EVX2Q03828 476 aa10.51□□□□□ -0.73
TPM4-203ENST00000586193 PRPF38BQ5VTL8 546 aaKnown RBP10.51□□□□□ -0.73
TPM4-203ENST00000586193 HMX1Q9NP08 348 aaPredicted RBP10.51□□□□□ -0.73
TPM4-203ENST00000586193 ZBTB3Q9H5J0 574 aa10.5□□□□□ -0.73
TPM4-203ENST00000586193 POTEFA5A3E0 1075 aa10.49□□□□□ -0.73
TPM4-203ENST00000586193 GPR37L1O60883 481 aa10.49□□□□□ -0.73
TPM4-203ENST00000586193 CTDSPL2Q05D32 466 aa10.49□□□□□ -0.73
TPM4-203ENST00000586193 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
TPM4-203ENST00000586193 VRTNQ9H8Y1 702 aa10.49□□□□□ -0.73
TPM4-203ENST00000586193 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
TPM4-203ENST00000586193 NUDT18Q6ZVK8 323 aa10.48□□□□□ -0.73
TPM4-203ENST00000586193 TRIM34Q9BYJ4 488 aa10.48□□□□□ -0.73
TPM4-203ENST00000586193 ALG2Q9H553 416 aa10.48□□□□□ -0.73
TPM4-203ENST00000586193 C3orf80F5H4A9 247 aa10.47□□□□□ -0.73
TPM4-203ENST00000586193 HAX1O00165 279 aa10.47□□□□□ -0.73
TPM4-203ENST00000586193 DNAJB2P25686 324 aa10.47□□□□□ -0.73
TPM4-203ENST00000586193 SND1Q7KZF4 910 aaKnown RBP eCLIP10.47□□□□□ -0.73
TPM4-203ENST00000586193 RDH13Q8NBN7 331 aa10.47□□□□□ -0.73
TPM4-203ENST00000586193 TFIP11Q9UBB9 837 aaKnown RBP10.47□□□□□ -0.73
TPM4-203ENST00000586193 AMOTL2Q9Y2J4 779 aa10.47□□□□□ -0.73
TPM4-203ENST00000586193 KDM4AO75164 1064 aa10.46□□□□□ -0.73
TPM4-203ENST00000586193 TMEM88BA6NKF7 163 aa10.45□□□□□ -0.74
TPM4-203ENST00000586193 COL9A1P20849 921 aa10.45□□□□□ -0.74
TPM4-203ENST00000586193 UCN2Q96RP3 112 aa10.45□□□□□ -0.74
TPM4-203ENST00000586193 TSKSQ9UJT2 592 aa10.45□□□□□ -0.74
TPM4-203ENST00000586193 FDX1P10109 184 aa10.44□□□□□ -0.74
TPM4-203ENST00000586193 TMEM134Q9H6X4 195 aa10.44□□□□□ -0.74
TPM4-203ENST00000586193 ATG7O95352 703 aa10.43□□□□□ -0.74
TPM4-203ENST00000586193 NUDT7P0C024 238 aa10.43□□□□□ -0.74
TPM4-203ENST00000586193 PRR7Q8TB68 274 aa10.43□□□□□ -0.74
TPM4-203ENST00000586193 LRRN4Q8WUT4 740 aa10.43□□□□□ -0.74
TPM4-203ENST00000586193 TSC1Q92574 1164 aa10.43□□□□□ -0.74
TPM4-203ENST00000586193 HOXA2O43364 376 aa10.42□□□□□ -0.74
TPM4-203ENST00000586193 SLC39A7Q92504 469 aa10.42□□□□□ -0.74
TPM4-203ENST00000586193 KHSRPQ92945 711 aaKnown RBP eCLIP10.42□□□□□ -0.74
TPM4-203ENST00000586193 PNMA3Q9UL41 463 aa10.42□□□□□ -0.74
TPM4-203ENST00000586193 MYT1LQ9UL68 1186 aa10.42□□□□□ -0.74
TPM4-203ENST00000586193 PCDHGC3Q9UN70 934 aa10.42□□□□□ -0.74
TPM4-203ENST00000586193 GUCA2AQ02747 115 aa10.41□□□□□ -0.74
TPM4-203ENST00000586193 EPS8L1Q8TE68 723 aa10.41□□□□□ -0.74
TPM4-203ENST00000586193 TATDN2Q93075 761 aa10.41□□□□□ -0.74
TPM4-203ENST00000586193 USP46P62068 366 aa10.4□□□□□ -0.74
TPM4-203ENST00000586193 HLA-CQ95604 372 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms