RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 E9PCH4 1651 aa34.52■■■■□ 3.12
LSM7-202ENST00000585395 IDI1Q13907 227 aa34.52■■■■□ 3.12
LSM7-202ENST00000585395 SLC52A1Q9NWF4 448 aa34.51■■■■□ 3.12
LSM7-202ENST00000585395 POTEAQ6S8J7 498 aa34.49■■■■□ 3.11
LSM7-202ENST00000585395 ACIN1Q9UKV3 1341 aaKnown RBP34.48■■■■□ 3.11
LSM7-202ENST00000585395 KDM5AP29375 1690 aaKnown RBP34.47■■■■□ 3.11
LSM7-202ENST00000585395 TMEM2Q9UHN6 1383 aa34.46■■■■□ 3.11
LSM7-202ENST00000585395 ADGRB3O60242 1522 aa34.45■■■■□ 3.11
LSM7-202ENST00000585395 TRIM52Q96A61 297 aa34.45■■■■□ 3.11
LSM7-202ENST00000585395 TMEM94Q12767 1356 aa34.44■■■■□ 3.1
LSM7-202ENST00000585395 CHGAP10645 457 aaKnown RBP34.41■■■■□ 3.1
LSM7-202ENST00000585395 ROBO1Q9Y6N7 1651 aa34.41■■■■□ 3.1
LSM7-202ENST00000585395 KCNA6P17658 529 aa34.4■■■■□ 3.1
LSM7-202ENST00000585395 SETD5Q9C0A6 1442 aa34.37■■■■□ 3.09
LSM7-202ENST00000585395 MYO5BQ9ULV0 1848 aa34.35■■■■□ 3.09
LSM7-202ENST00000585395 PROSER2Q86WR7 435 aaPredicted RBP34.34■■■■□ 3.09
LSM7-202ENST00000585395 SPHKAPQ2M3C7 1700 aa34.33■■■■□ 3.09
LSM7-202ENST00000585395 BCANQ96GW7 911 aa34.32■■■■□ 3.08
LSM7-202ENST00000585395 TRIM26Q12899 539 aaPredicted RBP34.31■■■■□ 3.08
LSM7-202ENST00000585395 PPP1R15AO75807 674 aaPredicted RBP34.3■■■■□ 3.08
LSM7-202ENST00000585395 NKTRP30414 1462 aaKnown RBP34.29■■■■□ 3.08
LSM7-202ENST00000585395 HDGFP51858 240 aaKnown RBP34.29■■■■□ 3.08
LSM7-202ENST00000585395 TMEM131LA2VDJ0 1609 aa34.29■■■■□ 3.08
LSM7-202ENST00000585395 SLC26A8Q96RN1 970 aa34.28■■■■□ 3.08
LSM7-202ENST00000585395 SLC4A1APQ9BWU0 796 aaKnown RBP34.26■■■■□ 3.08
LSM7-202ENST00000585395 NWD1Q149M9 1564 aa34.25■■■■□ 3.07
LSM7-202ENST00000585395 MSH6P52701 1360 aa34.24■■■■□ 3.07
LSM7-202ENST00000585395 RIMS2Q9UQ26 1411 aa34.24■■■■□ 3.07
LSM7-202ENST00000585395 RBM33Q96EV2 1170 aaKnown RBP34.24■■■■□ 3.07
LSM7-202ENST00000585395 JCADQ9P266 1359 aa34.23■■■■□ 3.07
LSM7-202ENST00000585395 SLAIN2Q9P270 581 aa34.22■■■■□ 3.07
LSM7-202ENST00000585395 SETD1AO15047 1707 aaKnown RBP34.21■■■■□ 3.07
LSM7-202ENST00000585395 PHLPP1O60346 1717 aa34.21■■■■□ 3.07
LSM7-202ENST00000585395 RAB3GAP2Q9H2M9 1393 aa34.21■■■■□ 3.07
LSM7-202ENST00000585395 HRCP23327 699 aa34.2■■■■□ 3.07
LSM7-202ENST00000585395 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.2■■■■□ 3.07
LSM7-202ENST00000585395 TRPM2O94759 1503 aa34.16■■■■□ 3.06
LSM7-202ENST00000585395 ZFYVE9O95405 1425 aa34.16■■■■□ 3.06
LSM7-202ENST00000585395 ZNF326Q5BKZ1 582 aaKnown RBP34.16■■■■□ 3.06
LSM7-202ENST00000585395 NUTM2DQ5VT03 806 aaPredicted RBP34.13■■■■□ 3.05
LSM7-202ENST00000585395 CLTCL1P53675 1640 aa34.12■■■■□ 3.05
LSM7-202ENST00000585395 KIF1BO60333 1816 aa34.12■■■■□ 3.05
LSM7-202ENST00000585395 PLEKHG1Q9ULL1 1385 aa34.11■■■■□ 3.05
LSM7-202ENST00000585395 COL16A1Q07092 1604 aaPredicted RBP34.08■■■■□ 3.05
LSM7-202ENST00000585395 SPATA31A6Q5VVP1 1343 aa34.07■■■■□ 3.05
LSM7-202ENST00000585395 CHD2O14647 1828 aaKnown RBP34.06■■■■□ 3.04
LSM7-202ENST00000585395 ZNF772Q68DY9 489 aaPredicted RBP34.05■■■■□ 3.04
LSM7-202ENST00000585395 NCOA3Q9Y6Q9 1424 aa34.04■■■■□ 3.04
LSM7-202ENST00000585395 MPHOSPH9Q99550 1183 aa34.04■■■■□ 3.04
LSM7-202ENST00000585395 FOXD1Q16676 465 aa34.03■■■■□ 3.04
LSM7-202ENST00000585395 UPF1Q92900 1129 aaKnown RBP eCLIP34.02■■■■□ 3.04
LSM7-202ENST00000585395 LRP6O75581 1613 aa34.01■■■■□ 3.03
LSM7-202ENST00000585395 MEX3CQ5U5Q3 659 aaKnown RBP34■■■■□ 3.03
LSM7-202ENST00000585395 TBX22Q9Y458 520 aa33.96■■■■□ 3.03
LSM7-202ENST00000585395 DIP2AQ14689 1571 aa33.96■■■■□ 3.03
LSM7-202ENST00000585395 CCDC144AA2RUR9 1427 aa33.95■■■■□ 3.02
LSM7-202ENST00000585395 AHDC1Q5TGY3 1603 aaPredicted RBP33.93■■■■□ 3.02
LSM7-202ENST00000585395 SHPRHQ149N8 1683 aa33.93■■■■□ 3.02
LSM7-202ENST00000585395 C14orf37Q86TY3 774 aa33.93■■■■□ 3.02
LSM7-202ENST00000585395 CADPS2Q86UW7 1296 aa33.93■■■■□ 3.02
LSM7-202ENST00000585395 NEXMIFQ5QGS0 1516 aa33.9■■■■□ 3.02
LSM7-202ENST00000585395 C19orf44Q9H6X5 657 aa33.9■■■■□ 3.02
LSM7-202ENST00000585395 ADAMTS13Q76LX8 1427 aa33.89■■■■□ 3.02
LSM7-202ENST00000585395 RXRBP28702 533 aa33.88■■■■□ 3.01
LSM7-202ENST00000585395 ATF3P18847 181 aa33.87■■■■□ 3.01
LSM7-202ENST00000585395 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.87■■■■□ 3.01
LSM7-202ENST00000585395 CDK12Q9NYV4 1490 aaPredicted RBP33.85■■■■□ 3.01
LSM7-202ENST00000585395 PIK3R4Q99570 1358 aa33.85■■■■□ 3.01
LSM7-202ENST00000585395 SETBP1Q9Y6X0 1596 aa33.84■■■■□ 3.01
LSM7-202ENST00000585395 VGFO15240 615 aaPredicted RBP33.83■■■■□ 3.01
LSM7-202ENST00000585395 RPGRIP1LQ68CZ1 1315 aa33.82■■■■□ 3.01
LSM7-202ENST00000585395 NRXN3Q9Y4C0 1643 aa33.81■■■■□ 3
LSM7-202ENST00000585395 RGL3Q3MIN7 710 aa33.79■■■■□ 3
LSM7-202ENST00000585395 PPLO60437 1756 aa33.78■■■■□ 3
LSM7-202ENST00000585395 PCGF6Q9BYE7 350 aa33.77■■■■□ 3
LSM7-202ENST00000585395 BRINP3Q76B58 766 aa33.76■■■□□ 2.99
LSM7-202ENST00000585395 AMOTL2Q9Y2J4 779 aa33.75■■■□□ 2.99
LSM7-202ENST00000585395 DCCP43146 1447 aa33.72■■■□□ 2.99
LSM7-202ENST00000585395 NUTM2BA6NNL0 878 aaPredicted RBP33.72■■■□□ 2.99
LSM7-202ENST00000585395 NUTM2EB1AL46 878 aaPredicted RBP33.72■■■□□ 2.99
LSM7-202ENST00000585395 NUTM2AQ8IVF1 878 aaPredicted RBP33.72■■■□□ 2.99
LSM7-202ENST00000585395 AFF2P51816 1311 aa33.7■■■□□ 2.99
LSM7-202ENST00000585395 PTPRUQ92729 1446 aa33.69■■■□□ 2.98
LSM7-202ENST00000585395 METP08581 1390 aa33.68■■■□□ 2.98
LSM7-202ENST00000585395 SPATA31E1Q6ZUB1 1445 aa33.68■■■□□ 2.98
LSM7-202ENST00000585395 ASXL1Q8IXJ9 1541 aa33.67■■■□□ 2.98
LSM7-202ENST00000585395 ANKRD30BQ9BXX2 1392 aa33.66■■■□□ 2.98
LSM7-202ENST00000585395 XRN1Q8IZH2 1706 aaKnown RBP33.65■■■□□ 2.98
LSM7-202ENST00000585395 IFT172Q9UG01 1749 aa33.63■■■□□ 2.97
LSM7-202ENST00000585395 LRRC59Q96AG4 307 aaKnown RBP33.62■■■□□ 2.97
LSM7-202ENST00000585395 SRCAPQ6ZRS2 3230 aa33.61■■■□□ 2.97
LSM7-202ENST00000585395 NHSL1Q5SYE7 1610 aa33.61■■■□□ 2.97
LSM7-202ENST00000585395 RBM6P78332 1123 aaKnown RBP33.6■■■□□ 2.97
LSM7-202ENST00000585395 RGS12O14924 1447 aa33.59■■■□□ 2.97
LSM7-202ENST00000585395 ADGRF5Q8IZF2 1346 aa33.58■■■□□ 2.97
LSM7-202ENST00000585395 MST1RQ04912 1400 aa33.58■■■□□ 2.97
LSM7-202ENST00000585395 QTRT2Q9H974 415 aaKnown RBP33.57■■■□□ 2.96
LSM7-202ENST00000585395 DHX57Q6P158 1386 aaKnown RBP33.56■■■□□ 2.96
LSM7-202ENST00000585395 C8orf37Q96NL8 207 aa33.55■■■□□ 2.96
LSM7-202ENST00000585395 PNPLA6Q8IY17 1366 aa33.51■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms