RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 SPATA31E1Q6ZUB1 1445 aa21.17■□□□□ 0.98
SCAMP4-209ENST00000585335 SCAF11Q99590 1463 aaKnown RBP21.17■□□□□ 0.98
SCAMP4-209ENST00000585335 RGL3Q3MIN7 710 aa21.16■□□□□ 0.98
SCAMP4-209ENST00000585335 TXNDC2Q86VQ3 553 aa21.16■□□□□ 0.98
SCAMP4-209ENST00000585335 POLR1AO95602 1720 aaPredicted RBP21.15■□□□□ 0.98
SCAMP4-209ENST00000585335 ZFYVE9O95405 1425 aa21.14■□□□□ 0.98
SCAMP4-209ENST00000585335 DMRT2Q9Y5R5 561 aa21.13■□□□□ 0.97
SCAMP4-209ENST00000585335 NCKAP5LQ9HCH0 1330 aa21.12■□□□□ 0.97
SCAMP4-209ENST00000585335 NEUROD1Q13562 356 aa21.12■□□□□ 0.97
SCAMP4-209ENST00000585335 NEXMIFQ5QGS0 1516 aa21.11■□□□□ 0.97
SCAMP4-209ENST00000585335 VGFO15240 615 aaPredicted RBP21.11■□□□□ 0.97
SCAMP4-209ENST00000585335 SIN3AQ96ST3 1273 aa21.11■□□□□ 0.97
SCAMP4-209ENST00000585335 NPHP4O75161 1426 aaPredicted RBP21.1■□□□□ 0.97
SCAMP4-209ENST00000585335 STRCQ7RTU9 1775 aa21.1■□□□□ 0.97
SCAMP4-209ENST00000585335 LTKP29376 864 aa21.09■□□□□ 0.97
SCAMP4-209ENST00000585335 BCANQ96GW7 911 aa21.09■□□□□ 0.97
SCAMP4-209ENST00000585335 MED14O60244 1454 aa21.08■□□□□ 0.97
SCAMP4-209ENST00000585335 STAC3Q96MF2 364 aa21.08■□□□□ 0.97
SCAMP4-209ENST00000585335 PLEKHG1Q9ULL1 1385 aa21.08■□□□□ 0.96
SCAMP4-209ENST00000585335 PPLO60437 1756 aa21.08■□□□□ 0.96
SCAMP4-209ENST00000585335 NUTM2DQ5VT03 806 aaPredicted RBP21.07■□□□□ 0.96
SCAMP4-209ENST00000585335 IQGAP1P46940 1657 aa21.06■□□□□ 0.96
SCAMP4-209ENST00000585335 TONSLQ96HA7 1378 aa21.06■□□□□ 0.96
SCAMP4-209ENST00000585335 IFT172Q9UG01 1749 aa21.05■□□□□ 0.96
SCAMP4-209ENST00000585335 DCAF11Q8TEB1 546 aa21.04■□□□□ 0.96
SCAMP4-209ENST00000585335 MYOM2P54296 1465 aa21.04■□□□□ 0.96
SCAMP4-209ENST00000585335 KDM2AQ9Y2K7 1162 aa21■□□□□ 0.95
SCAMP4-209ENST00000585335 DIP2AQ14689 1571 aa21■□□□□ 0.95
SCAMP4-209ENST00000585335 SETBP1Q9Y6X0 1596 aa21■□□□□ 0.95
SCAMP4-209ENST00000585335 L3MBTL2Q969R5 705 aa20.98■□□□□ 0.95
SCAMP4-209ENST00000585335 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
SCAMP4-209ENST00000585335 ADGRF5Q8IZF2 1346 aa20.98■□□□□ 0.95
SCAMP4-209ENST00000585335 TIMELESSQ9UNS1 1208 aa20.97■□□□□ 0.95
SCAMP4-209ENST00000585335 SLC26A8Q96RN1 970 aa20.96■□□□□ 0.95
SCAMP4-209ENST00000585335 TBX22Q9Y458 520 aa20.96■□□□□ 0.95
SCAMP4-209ENST00000585335 PIK3C2GO75747 1445 aa20.95■□□□□ 0.95
SCAMP4-209ENST00000585335 NRXN1Q9ULB1 1477 aa20.95■□□□□ 0.94
SCAMP4-209ENST00000585335 ILDR1Q86SU0 546 aaPredicted RBP20.95■□□□□ 0.94
SCAMP4-209ENST00000585335 ADAMTS13Q76LX8 1427 aa20.93■□□□□ 0.94
SCAMP4-209ENST00000585335 LAMC1P11047 1609 aa20.93■□□□□ 0.94
SCAMP4-209ENST00000585335 NRXN3Q9Y4C0 1643 aa20.93■□□□□ 0.94
SCAMP4-209ENST00000585335 PIK3R4Q99570 1358 aa20.91■□□□□ 0.94
SCAMP4-209ENST00000585335 ALKQ9UM73 1620 aa20.91■□□□□ 0.94
SCAMP4-209ENST00000585335 PRAG1Q86YV5 1406 aa20.89■□□□□ 0.94
SCAMP4-209ENST00000585335 C14orf93Q9H972 538 aaKnown RBP20.88■□□□□ 0.93
SCAMP4-209ENST00000585335 KCNA6P17658 529 aa20.85■□□□□ 0.93
SCAMP4-209ENST00000585335 CFAP70Q5T0N1 1121 aa20.85■□□□□ 0.93
SCAMP4-209ENST00000585335 METP08581 1390 aa20.85■□□□□ 0.93
SCAMP4-209ENST00000585335 SETD1AO15047 1707 aaKnown RBP20.84■□□□□ 0.93
SCAMP4-209ENST00000585335 KIAA1210Q9ULL0 1709 aa20.84■□□□□ 0.93
SCAMP4-209ENST00000585335 ZNF335Q9H4Z2 1342 aaPredicted RBP20.84■□□□□ 0.93
SCAMP4-209ENST00000585335 NWD1Q149M9 1564 aa20.82■□□□□ 0.92
SCAMP4-209ENST00000585335 CHD2O14647 1828 aaKnown RBP20.82■□□□□ 0.92
SCAMP4-209ENST00000585335 CPS1P31327 1500 aa20.82■□□□□ 0.92
SCAMP4-209ENST00000585335 NKTRP30414 1462 aaKnown RBP20.81■□□□□ 0.92
SCAMP4-209ENST00000585335 AMOTL2Q9Y2J4 779 aa20.81■□□□□ 0.92
SCAMP4-209ENST00000585335 TMEM132EQ6IEE7 984 aa20.79■□□□□ 0.92
SCAMP4-209ENST00000585335 LRPPRCP42704 1394 aaKnown RBP20.79■□□□□ 0.92
SCAMP4-209ENST00000585335 ROCK2O75116 1388 aaKnown RBP20.78■□□□□ 0.92
SCAMP4-209ENST00000585335 XRN1Q8IZH2 1706 aaKnown RBP20.78■□□□□ 0.92
SCAMP4-209ENST00000585335 TRPM1Q7Z4N2 1603 aa20.78■□□□□ 0.92
SCAMP4-209ENST00000585335 PTPRUQ92729 1446 aa20.78■□□□□ 0.92
SCAMP4-209ENST00000585335 YTHDC2Q9H6S0 1430 aaKnown RBP20.78■□□□□ 0.92
SCAMP4-209ENST00000585335 NBPF8Q3BBV2 869 aa20.77■□□□□ 0.92
SCAMP4-209ENST00000585335 STK26Q9P289 416 aa20.77■□□□□ 0.92
SCAMP4-209ENST00000585335 ASXL1Q8IXJ9 1541 aa20.77■□□□□ 0.92
SCAMP4-209ENST00000585335 ADGRB1O14514 1584 aa20.76■□□□□ 0.91
SCAMP4-209ENST00000585335 PROSER2Q86WR7 435 aaPredicted RBP20.76■□□□□ 0.91
SCAMP4-209ENST00000585335 RALGAPBQ86X10 1494 aa20.75■□□□□ 0.91
SCAMP4-209ENST00000585335 LTBP4Q8N2S1 1624 aa20.75■□□□□ 0.91
SCAMP4-209ENST00000585335 ABCC11Q96J66 1382 aa20.75■□□□□ 0.91
SCAMP4-209ENST00000585335 STRCP1A6NGW2 1772 aa20.74■□□□□ 0.91
SCAMP4-209ENST00000585335 PTCH1Q13635 1447 aa20.74■□□□□ 0.91
SCAMP4-209ENST00000585335 KNDC1Q76NI1 1749 aa20.73■□□□□ 0.91
SCAMP4-209ENST00000585335 TECPR2O15040 1411 aa20.73■□□□□ 0.91
SCAMP4-209ENST00000585335 NBPF1Q3BBV0 1214 aa20.72■□□□□ 0.91
SCAMP4-209ENST00000585335 LRRC7Q96NW7 1537 aa20.7■□□□□ 0.9
SCAMP4-209ENST00000585335 DLC1Q96QB1 1528 aa20.7■□□□□ 0.9
SCAMP4-209ENST00000585335 C14orf37Q86TY3 774 aa20.7■□□□□ 0.9
SCAMP4-209ENST00000585335 CARD11Q9BXL7 1154 aa20.7■□□□□ 0.9
SCAMP4-209ENST00000585335 TRAK1Q9UPV9 953 aa20.7■□□□□ 0.9
SCAMP4-209ENST00000585335 GPRASP1Q5JY77 1395 aa20.7■□□□□ 0.9
SCAMP4-209ENST00000585335 NCOA3Q9Y6Q9 1424 aa20.7■□□□□ 0.9
SCAMP4-209ENST00000585335 SIRT1Q96EB6 747 aa20.69■□□□□ 0.9
SCAMP4-209ENST00000585335 TMEM94Q12767 1356 aa20.69■□□□□ 0.9
SCAMP4-209ENST00000585335 EIF3AQ14152 1382 aaKnown RBP20.69■□□□□ 0.9
SCAMP4-209ENST00000585335 ROBO2Q9HCK4 1378 aa20.69■□□□□ 0.9
SCAMP4-209ENST00000585335 FAM135BQ49AJ0 1406 aa20.69■□□□□ 0.9
SCAMP4-209ENST00000585335 POGKQ9P215 609 aa20.68■□□□□ 0.9
SCAMP4-209ENST00000585335 IQSEC2Q5JU85 1478 aa20.67■□□□□ 0.9
SCAMP4-209ENST00000585335 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
SCAMP4-209ENST00000585335 CERKQ8TCT0 537 aa20.66■□□□□ 0.9
SCAMP4-209ENST00000585335 PRAM1Q96QH2 718 aa20.65■□□□□ 0.9
SCAMP4-209ENST00000585335 MSH6P52701 1360 aa20.64■□□□□ 0.89
SCAMP4-209ENST00000585335 ARHGEF28Q8N1W1 1705 aaKnown RBP20.63■□□□□ 0.89
SCAMP4-209ENST00000585335 WAPLQ7Z5K2 1190 aa20.62■□□□□ 0.89
SCAMP4-209ENST00000585335 RBM33Q96EV2 1170 aaKnown RBP20.62■□□□□ 0.89
SCAMP4-209ENST00000585335 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
SCAMP4-209ENST00000585335 CENPJQ9HC77 1338 aaPredicted RBP20.6■□□□□ 0.89
SCAMP4-209ENST00000585335 C19orf44Q9H6X5 657 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms