RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 APLP1P51693 650 aa11.38□□□□□ -0.59
NLK-206ENST00000584878 MAP2K5Q13163 448 aa11.38□□□□□ -0.59
NLK-206ENST00000584878 NYAP1Q6ZVC0 841 aa11.38□□□□□ -0.59
NLK-206ENST00000584878 ZC3H15Q8WU90 426 aaKnown RBP11.35□□□□□ -0.59
NLK-206ENST00000584878 SLC4A3P48751 1232 aa11.34□□□□□ -0.59
NLK-206ENST00000584878 CCDC102AQ96A19 550 aa11.34□□□□□ -0.59
NLK-206ENST00000584878 IRF6O14896 467 aa11.33□□□□□ -0.6
NLK-206ENST00000584878 SLC10A3P09131 477 aa11.33□□□□□ -0.6
NLK-206ENST00000584878 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
NLK-206ENST00000584878 MINK1Q8N4C8 1332 aaPredicted RBP11.31□□□□□ -0.6
NLK-206ENST00000584878 CFHP08603 1231 aa11.3□□□□□ -0.6
NLK-206ENST00000584878 MTRQ99707 1265 aa11.3□□□□□ -0.6
NLK-206ENST00000584878 ZMYND10O75800 440 aa11.29□□□□□ -0.6
NLK-206ENST00000584878 TJAP1Q5JTD0 557 aa11.29□□□□□ -0.6
NLK-206ENST00000584878 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
NLK-206ENST00000584878 COPS2P61201 443 aa11.28□□□□□ -0.6
NLK-206ENST00000584878 KCNC4Q03721 635 aa11.28□□□□□ -0.6
NLK-206ENST00000584878 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
NLK-206ENST00000584878 KRI1Q8N9T8 703 aaKnown RBP11.28□□□□□ -0.6
NLK-206ENST00000584878 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
NLK-206ENST00000584878 DAXXQ9UER7 740 aaPredicted RBP11.28□□□□□ -0.6
NLK-206ENST00000584878 BCANQ96GW7 911 aa11.27□□□□□ -0.61
NLK-206ENST00000584878 MDM2Q00987 491 aaPredicted RBP11.26□□□□□ -0.61
NLK-206ENST00000584878 RDH13Q8NBN7 331 aa11.26□□□□□ -0.61
NLK-206ENST00000584878 ZNF516Q92618 1163 aa11.26□□□□□ -0.61
NLK-206ENST00000584878 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
NLK-206ENST00000584878 PCDHB3Q9Y5E6 796 aa11.24□□□□□ -0.61
NLK-206ENST00000584878 KMT5BQ4FZB7 885 aa11.23□□□□□ -0.61
NLK-206ENST00000584878 BLOC1S3Q6QNY0 202 aa11.23□□□□□ -0.61
NLK-206ENST00000584878 IL21Q9HBE4 155 aa11.23□□□□□ -0.61
NLK-206ENST00000584878 A0A0G2JS52 829 aa11.22□□□□□ -0.61
NLK-206ENST00000584878 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
NLK-206ENST00000584878 PRR14Q9BWN1 585 aa11.21□□□□□ -0.61
NLK-206ENST00000584878 PUS10Q3MIT2 529 aaKnown RBP11.2□□□□□ -0.62
NLK-206ENST00000584878 NKX2-3Q8TAU0 364 aa11.2□□□□□ -0.62
NLK-206ENST00000584878 SULF1Q8IWU6 871 aa11.19□□□□□ -0.62
NLK-206ENST00000584878 RSPH4AQ5TD94 716 aa11.18□□□□□ -0.62
NLK-206ENST00000584878 REPIN1Q9BWE0 567 aaKnown RBP11.18□□□□□ -0.62
NLK-206ENST00000584878 TLL1O43897 1013 aa11.17□□□□□ -0.62
NLK-206ENST00000584878 FUT2Q10981 343 aa11.16□□□□□ -0.62
NLK-206ENST00000584878 GPCPD1Q9NPB8 672 aa11.16□□□□□ -0.62
NLK-206ENST00000584878 ZPR1O75312 459 aa11.15□□□□□ -0.62
NLK-206ENST00000584878 CD46P15529 392 aa11.15□□□□□ -0.62
NLK-206ENST00000584878 GCGRP47871 477 aa11.15□□□□□ -0.62
NLK-206ENST00000584878 CLCN1P35523 988 aa11.14□□□□□ -0.63
NLK-206ENST00000584878 TTLL12Q14166 644 aaPredicted RBP11.14□□□□□ -0.63
NLK-206ENST00000584878 TMUB1Q9BVT8 246 aa11.14□□□□□ -0.63
NLK-206ENST00000584878 SLC24A3Q9HC58 644 aa11.14□□□□□ -0.63
NLK-206ENST00000584878 FAM217BQ9NTX9 383 aaPredicted RBP11.13□□□□□ -0.63
NLK-206ENST00000584878 TRIM66O15016 1216 aa11.11□□□□□ -0.63
NLK-206ENST00000584878 AMHR2Q16671 573 aa11.11□□□□□ -0.63
NLK-206ENST00000584878 PPP1R18Q6NYC8 613 aa11.1□□□□□ -0.63
NLK-206ENST00000584878 AK7Q96M32 723 aa11.1□□□□□ -0.63
NLK-206ENST00000584878 NR1I2O75469 434 aa11.09□□□□□ -0.63
NLK-206ENST00000584878 MORN1Q5T089 497 aa11.09□□□□□ -0.63
NLK-206ENST00000584878 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
NLK-206ENST00000584878 ATP6V1AP38606 617 aa11.08□□□□□ -0.64
NLK-206ENST00000584878 GIGYF2Q6Y7W6 1299 aaKnown RBP11.08□□□□□ -0.64
NLK-206ENST00000584878 PARP9Q8IXQ6 854 aa11.08□□□□□ -0.64
NLK-206ENST00000584878 HLA-CQ95604 372 aa11.08□□□□□ -0.64
NLK-206ENST00000584878 SLC27A5Q9Y2P5 690 aa11.07□□□□□ -0.64
NLK-206ENST00000584878 KDM4AO75164 1064 aa11.06□□□□□ -0.64
NLK-206ENST00000584878 SSTR3P32745 418 aaPredicted RBP11.06□□□□□ -0.64
NLK-206ENST00000584878 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.05□□□□□ -0.64
NLK-206ENST00000584878 S1PR4O95977 384 aa11.04□□□□□ -0.64
NLK-206ENST00000584878 ADH1BP00325 375 aa11.03□□□□□ -0.64
NLK-206ENST00000584878 GUCA2AQ02747 115 aa11.03□□□□□ -0.64
NLK-206ENST00000584878 PDE4DQ08499 809 aa11.03□□□□□ -0.64
NLK-206ENST00000584878 PPEF1O14829 653 aaPredicted RBP11.02□□□□□ -0.65
NLK-206ENST00000584878 RNF19BQ6ZMZ0 732 aa11.02□□□□□ -0.65
NLK-206ENST00000584878 HOXA2O43364 376 aa11.01□□□□□ -0.65
NLK-206ENST00000584878 MS4A1P11836 297 aa11.01□□□□□ -0.65
NLK-206ENST00000584878 THAP11Q96EK4 314 aa11.01□□□□□ -0.65
NLK-206ENST00000584878 SPSB2Q99619 263 aa11.01□□□□□ -0.65
NLK-206ENST00000584878 RNF223E7ERA6 249 aa11□□□□□ -0.65
NLK-206ENST00000584878 RGS20O76081 388 aa10.99□□□□□ -0.65
NLK-206ENST00000584878 GGCXP38435 758 aa10.99□□□□□ -0.65
NLK-206ENST00000584878 GRIPAP1Q4V328 841 aa10.99□□□□□ -0.65
NLK-206ENST00000584878 NUTM1Q86Y26 1132 aa10.99□□□□□ -0.65
NLK-206ENST00000584878 BEGAINQ9BUH8 593 aa10.99□□□□□ -0.65
NLK-206ENST00000584878 SLC6A16Q9GZN6 736 aa10.99□□□□□ -0.65
NLK-206ENST00000584878 PRDM9Q9NQV7 894 aa10.99□□□□□ -0.65
NLK-206ENST00000584878 FMNL1O95466 1100 aaPredicted RBP10.97□□□□□ -0.65
NLK-206ENST00000584878 USP46P62068 366 aa10.97□□□□□ -0.65
NLK-206ENST00000584878 BRICD5Q6PL45 260 aa10.97□□□□□ -0.65
NLK-206ENST00000584878 SPIRE2Q8WWL2 714 aa10.97□□□□□ -0.65
NLK-206ENST00000584878 PRKD2Q9BZL6 878 aa10.97□□□□□ -0.65
NLK-206ENST00000584878 FAM160A2Q8N612 972 aaPredicted RBP10.96□□□□□ -0.65
NLK-206ENST00000584878 MOXD2PA6NHM9 499 aa10.94□□□□□ -0.66
NLK-206ENST00000584878 NDUFV2P19404 249 aa10.94□□□□□ -0.66
NLK-206ENST00000584878 SYMPKQ92797 1274 aaKnown RBP10.94□□□□□ -0.66
NLK-206ENST00000584878 EMID1Q96A84 441 aaPredicted RBP10.93□□□□□ -0.66
NLK-206ENST00000584878 PLA2G2CQ5R387 149 aa10.92□□□□□ -0.66
NLK-206ENST00000584878 GPBP1L1Q9HC44 474 aaPredicted RBP10.92□□□□□ -0.66
NLK-206ENST00000584878 PCDHGC3Q9UN70 934 aa10.92□□□□□ -0.66
NLK-206ENST00000584878 SALL2Q9Y467 1007 aaPredicted RBP10.92□□□□□ -0.66
NLK-206ENST00000584878 FDX1P10109 184 aa10.91□□□□□ -0.66
NLK-206ENST00000584878 Q3C1V9 767 aa10.91□□□□□ -0.66
NLK-206ENST00000584878 ANKLE1Q8NAG6 615 aa10.91□□□□□ -0.66
NLK-206ENST00000584878 TBC1D2Q9BYX2 928 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms