RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
CSNK1D-224ENST00000584672 MYO5BQ9ULV0 1848 aa22.39■■□□□ 1.17
CSNK1D-224ENST00000584672 CHD2O14647 1828 aaKnown RBP22.38■■□□□ 1.17
CSNK1D-224ENST00000584672 LMTK2Q8IWU2 1503 aa22.37■■□□□ 1.17
CSNK1D-224ENST00000584672 PTPN23Q9H3S7 1636 aa22.37■■□□□ 1.17
CSNK1D-224ENST00000584672 C14orf37Q86TY3 774 aa22.36■■□□□ 1.17
CSNK1D-224ENST00000584672 CHIC2Q9UKJ5 165 aa22.36■■□□□ 1.17
CSNK1D-224ENST00000584672 NOS1P29475 1434 aa22.35■■□□□ 1.17
CSNK1D-224ENST00000584672 DAPK1P53355 1430 aa22.34■■□□□ 1.17
CSNK1D-224ENST00000584672 ZNF772Q68DY9 489 aaPredicted RBP22.34■■□□□ 1.17
CSNK1D-224ENST00000584672 SPATA31A6Q5VVP1 1343 aa22.33■■□□□ 1.17
CSNK1D-224ENST00000584672 GCC2Q8IWJ2 1684 aa22.33■■□□□ 1.17
CSNK1D-224ENST00000584672 PPP1R15AO75807 674 aaPredicted RBP22.33■■□□□ 1.17
CSNK1D-224ENST00000584672 SHPRHQ149N8 1683 aa22.33■■□□□ 1.16
CSNK1D-224ENST00000584672 FGD6Q6ZV73 1430 aa22.31■■□□□ 1.16
CSNK1D-224ENST00000584672 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.31■■□□□ 1.16
CSNK1D-224ENST00000584672 ZFYVE9O95405 1425 aa22.31■■□□□ 1.16
CSNK1D-224ENST00000584672 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
CSNK1D-224ENST00000584672 PLEKHG1Q9ULL1 1385 aa22.3■■□□□ 1.16
CSNK1D-224ENST00000584672 NUTM2BA6NNL0 878 aaPredicted RBP22.3■■□□□ 1.16
CSNK1D-224ENST00000584672 NUTM2EB1AL46 878 aaPredicted RBP22.3■■□□□ 1.16
CSNK1D-224ENST00000584672 NUTM2AQ8IVF1 878 aaPredicted RBP22.3■■□□□ 1.16
CSNK1D-224ENST00000584672 AHDC1Q5TGY3 1603 aaPredicted RBP22.3■■□□□ 1.16
CSNK1D-224ENST00000584672 RXRBP28702 533 aa22.29■■□□□ 1.16
CSNK1D-224ENST00000584672 SLC52A1Q9NWF4 448 aa22.28■■□□□ 1.16
CSNK1D-224ENST00000584672 ANKRD30AQ9BXX3 1397 aa22.26■■□□□ 1.15
CSNK1D-224ENST00000584672 NUTM2DQ5VT03 806 aaPredicted RBP22.26■■□□□ 1.15
CSNK1D-224ENST00000584672 CHGAP10645 457 aaKnown RBP22.24■■□□□ 1.15
CSNK1D-224ENST00000584672 ATF3P18847 181 aa22.24■■□□□ 1.15
CSNK1D-224ENST00000584672 TMEM131LA2VDJ0 1609 aa22.24■■□□□ 1.15
CSNK1D-224ENST00000584672 CADPS2Q86UW7 1296 aa22.23■■□□□ 1.15
CSNK1D-224ENST00000584672 DIP2AQ14689 1571 aa22.23■■□□□ 1.15
CSNK1D-224ENST00000584672 AFF2P51816 1311 aa22.22■■□□□ 1.15
CSNK1D-224ENST00000584672 TBX22Q9Y458 520 aa22.21■■□□□ 1.15
CSNK1D-224ENST00000584672 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
CSNK1D-224ENST00000584672 C19orf44Q9H6X5 657 aa22.2■■□□□ 1.14
CSNK1D-224ENST00000584672 ADAMTS13Q76LX8 1427 aa22.2■■□□□ 1.14
CSNK1D-224ENST00000584672 NCOA3Q9Y6Q9 1424 aa22.2■■□□□ 1.14
CSNK1D-224ENST00000584672 BRINP3Q76B58 766 aa22.19■■□□□ 1.14
CSNK1D-224ENST00000584672 CDK12Q9NYV4 1490 aaPredicted RBP22.19■■□□□ 1.14
CSNK1D-224ENST00000584672 RPRD2Q5VT52 1461 aaKnown RBP22.18■■□□□ 1.14
CSNK1D-224ENST00000584672 HDGFP51858 240 aaKnown RBP22.18■■□□□ 1.14
CSNK1D-224ENST00000584672 RGS12O14924 1447 aa22.17■■□□□ 1.14
CSNK1D-224ENST00000584672 ASXL1Q8IXJ9 1541 aa22.15■■□□□ 1.14
CSNK1D-224ENST00000584672 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.13
CSNK1D-224ENST00000584672 C8orf37Q96NL8 207 aa22.14■■□□□ 1.13
CSNK1D-224ENST00000584672 PTPRUQ92729 1446 aa22.13■■□□□ 1.13
CSNK1D-224ENST00000584672 TRPM2O94759 1503 aa22.12■■□□□ 1.13
CSNK1D-224ENST00000584672 ADGRL2O95490 1459 aa22.12■■□□□ 1.13
CSNK1D-224ENST00000584672 AMOTL2Q9Y2J4 779 aa22.12■■□□□ 1.13
CSNK1D-224ENST00000584672 NHSL1Q5SYE7 1610 aa22.12■■□□□ 1.13
CSNK1D-224ENST00000584672 APLP2Q06481 763 aa22.11■■□□□ 1.13
CSNK1D-224ENST00000584672 ANKRD50Q9ULJ7 1429 aa22.11■■□□□ 1.13
CSNK1D-224ENST00000584672 DDX17Q92841 729 aaKnown RBP22.1■■□□□ 1.13
CSNK1D-224ENST00000584672 QTRT2Q9H974 415 aaKnown RBP22.1■■□□□ 1.13
CSNK1D-224ENST00000584672 E9PCH4 1651 aa22.1■■□□□ 1.13
CSNK1D-224ENST00000584672 PIK3R4Q99570 1358 aa22.1■■□□□ 1.13
CSNK1D-224ENST00000584672 UNC13BO14795 1591 aa22.08■■□□□ 1.13
CSNK1D-224ENST00000584672 SETD5Q9C0A6 1442 aa22.08■■□□□ 1.13
CSNK1D-224ENST00000584672 MST1RQ04912 1400 aa22.07■■□□□ 1.12
CSNK1D-224ENST00000584672 SRCAPQ6ZRS2 3230 aa22.07■■□□□ 1.12
CSNK1D-224ENST00000584672 RBM6P78332 1123 aaKnown RBP22.07■■□□□ 1.12
CSNK1D-224ENST00000584672 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
CSNK1D-224ENST00000584672 XRN1Q8IZH2 1706 aaKnown RBP22.05■■□□□ 1.12
CSNK1D-224ENST00000584672 DCCP43146 1447 aa22.05■■□□□ 1.12
CSNK1D-224ENST00000584672 PNPLA6Q8IY17 1366 aa22.04■■□□□ 1.12
CSNK1D-224ENST00000584672 ADAMTS2O95450 1211 aa22.04■■□□□ 1.12
CSNK1D-224ENST00000584672 LRRC59Q96AG4 307 aaKnown RBP22.03■■□□□ 1.12
CSNK1D-224ENST00000584672 NRXN3Q9Y4C0 1643 aa22.02■■□□□ 1.12
CSNK1D-224ENST00000584672 NGLY1Q96IV0 654 aa22.01■■□□□ 1.11
CSNK1D-224ENST00000584672 NALCNQ8IZF0 1738 aa21.99■■□□□ 1.11
CSNK1D-224ENST00000584672 ATAD2Q6PL18 1390 aa21.98■■□□□ 1.11
CSNK1D-224ENST00000584672 SETBP1Q9Y6X0 1596 aa21.96■■□□□ 1.11
CSNK1D-224ENST00000584672 IQGAP3Q86VI3 1631 aa21.96■■□□□ 1.11
CSNK1D-224ENST00000584672 METP08581 1390 aa21.95■■□□□ 1.1
CSNK1D-224ENST00000584672 ADGRL3Q9HAR2 1447 aa21.95■■□□□ 1.1
CSNK1D-224ENST00000584672 ZRANB1Q9UGI0 708 aa21.93■■□□□ 1.1
CSNK1D-224ENST00000584672 USP21Q9UK80 565 aa21.93■■□□□ 1.1
CSNK1D-224ENST00000584672 ZNF326Q5BKZ1 582 aaKnown RBP21.92■■□□□ 1.1
CSNK1D-224ENST00000584672 C1orf167Q5SNV9 1468 aa21.89■■□□□ 1.09
CSNK1D-224ENST00000584672 NUP155O75694 1391 aa21.88■■□□□ 1.09
CSNK1D-224ENST00000584672 TRPC5Q9UL62 973 aaPredicted RBP21.88■■□□□ 1.09
CSNK1D-224ENST00000584672 SPHKAPQ2M3C7 1700 aa21.87■■□□□ 1.09
CSNK1D-224ENST00000584672 ORAI2Q96SN7 254 aa21.86■■□□□ 1.09
CSNK1D-224ENST00000584672 ATRNO75882 1429 aa21.85■■□□□ 1.09
CSNK1D-224ENST00000584672 LAMC1P11047 1609 aa21.84■■□□□ 1.09
CSNK1D-224ENST00000584672 EP400Q96L91 3159 aa21.84■■□□□ 1.09
CSNK1D-224ENST00000584672 FOXD1Q16676 465 aa21.83■■□□□ 1.09
CSNK1D-224ENST00000584672 SOS2Q07890 1332 aaPredicted RBP21.82■■□□□ 1.08
CSNK1D-224ENST00000584672 PTCH1Q13635 1447 aa21.82■■□□□ 1.08
CSNK1D-224ENST00000584672 FNBP4Q8N3X1 1017 aaPredicted RBP21.81■■□□□ 1.08
CSNK1D-224ENST00000584672 NEXMIFQ5QGS0 1516 aa21.8■■□□□ 1.08
CSNK1D-224ENST00000584672 ITGAEP38570 1179 aa21.79■■□□□ 1.08
CSNK1D-224ENST00000584672 COL22A1Q8NFW1 1626 aaPredicted RBP21.79■■□□□ 1.08
CSNK1D-224ENST00000584672 CLTCL1P53675 1640 aa21.78■■□□□ 1.08
CSNK1D-224ENST00000584672 ROCK1Q13464 1354 aa21.77■■□□□ 1.08
CSNK1D-224ENST00000584672 ROBO2Q9HCK4 1378 aa21.77■■□□□ 1.08
CSNK1D-224ENST00000584672 MARF1Q9Y4F3 1742 aaKnown RBP21.77■■□□□ 1.08
CSNK1D-224ENST00000584672 MYOM2P54296 1465 aa21.75■■□□□ 1.07
CSNK1D-224ENST00000584672 BCL9LQ86UU0 1499 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms