RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
ITGB4-212ENST00000584558 KIF3BO15066 747 aa17.01■□□□□ 0.31
ITGB4-212ENST00000584558 COL17A1Q9UMD9 1497 aaPredicted RBP17.01■□□□□ 0.31
ITGB4-212ENST00000584558 KANK1Q14678 1352 aa17■□□□□ 0.31
ITGB4-212ENST00000584558 USP35Q9P2H5 1018 aa17■□□□□ 0.31
ITGB4-212ENST00000584558 KDM2AQ9Y2K7 1162 aa17■□□□□ 0.31
ITGB4-212ENST00000584558 PPRC1Q5VV67 1664 aaKnown RBP17■□□□□ 0.31
ITGB4-212ENST00000584558 NEURL4Q96JN8 1562 aa17■□□□□ 0.31
ITGB4-212ENST00000584558 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
ITGB4-212ENST00000584558 GPRASP1Q5JY77 1395 aa16.99■□□□□ 0.31
ITGB4-212ENST00000584558 DIP2CQ9Y2E4 1556 aa16.97■□□□□ 0.31
ITGB4-212ENST00000584558 CARD11Q9BXL7 1154 aa16.97■□□□□ 0.31
ITGB4-212ENST00000584558 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
ITGB4-212ENST00000584558 MADDQ8WXG6 1647 aa16.96■□□□□ 0.31
ITGB4-212ENST00000584558 ARID4BQ4LE39 1312 aaPredicted RBP16.95■□□□□ 0.3
ITGB4-212ENST00000584558 ROCK2O75116 1388 aaKnown RBP16.95■□□□□ 0.3
ITGB4-212ENST00000584558 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
ITGB4-212ENST00000584558 PPM1GO15355 546 aaPredicted RBP16.93■□□□□ 0.3
ITGB4-212ENST00000584558 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
ITGB4-212ENST00000584558 GSE1Q14687 1217 aa16.91■□□□□ 0.3
ITGB4-212ENST00000584558 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
ITGB4-212ENST00000584558 ZMYM4Q5VZL5 1548 aa16.91■□□□□ 0.3
ITGB4-212ENST00000584558 NBPF1Q3BBV0 1214 aa16.91■□□□□ 0.3
ITGB4-212ENST00000584558 PKNOX2Q96KN3 472 aa16.9■□□□□ 0.3
ITGB4-212ENST00000584558 IFT172Q9UG01 1749 aa16.9■□□□□ 0.3
ITGB4-212ENST00000584558 ABCC3O15438 1527 aa16.9■□□□□ 0.3
ITGB4-212ENST00000584558 ST20-MTHFSA0A0A6YYL1 179 aa16.89■□□□□ 0.29
ITGB4-212ENST00000584558 MROH2AA6NES4 1674 aa16.89■□□□□ 0.29
ITGB4-212ENST00000584558 KIF1BO60333 1816 aa16.89■□□□□ 0.29
ITGB4-212ENST00000584558 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
ITGB4-212ENST00000584558 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
ITGB4-212ENST00000584558 NPATQ14207 1427 aa16.88■□□□□ 0.29
ITGB4-212ENST00000584558 IQGAP1P46940 1657 aa16.88■□□□□ 0.29
ITGB4-212ENST00000584558 NUDCQ9Y266 331 aa16.87■□□□□ 0.29
ITGB4-212ENST00000584558 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
ITGB4-212ENST00000584558 KIAA1210Q9ULL0 1709 aa16.87■□□□□ 0.29
ITGB4-212ENST00000584558 YEATS2Q9ULM3 1422 aa16.87■□□□□ 0.29
ITGB4-212ENST00000584558 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
ITGB4-212ENST00000584558 PDE4AP27815 886 aa16.85■□□□□ 0.29
ITGB4-212ENST00000584558 MYOM2P54296 1465 aa16.85■□□□□ 0.29
ITGB4-212ENST00000584558 ADGRB3O60242 1522 aa16.85■□□□□ 0.29
ITGB4-212ENST00000584558 ZC3H13Q5T200 1668 aaKnown RBP16.85■□□□□ 0.29
ITGB4-212ENST00000584558 SIGLEC1Q9BZZ2 1709 aa16.85■□□□□ 0.29
ITGB4-212ENST00000584558 MLECQ14165 292 aa16.84■□□□□ 0.29
ITGB4-212ENST00000584558 FRAT1Q92837 279 aaPredicted RBP16.83■□□□□ 0.29
ITGB4-212ENST00000584558 RNF123Q5XPI4 1314 aa16.82■□□□□ 0.28
ITGB4-212ENST00000584558 NRXN1Q9ULB1 1477 aa16.82■□□□□ 0.28
ITGB4-212ENST00000584558 PIK3C2BO00750 1634 aa16.82■□□□□ 0.28
ITGB4-212ENST00000584558 TESK2Q96S53 571 aa16.82■□□□□ 0.28
ITGB4-212ENST00000584558 RSPH6AQ9H0K4 717 aa16.82■□□□□ 0.28
ITGB4-212ENST00000584558 NOS1P29475 1434 aa16.81■□□□□ 0.28
ITGB4-212ENST00000584558 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
ITGB4-212ENST00000584558 GGT6Q6P531 493 aa16.81■□□□□ 0.28
ITGB4-212ENST00000584558 REREQ9P2R6 1566 aa16.81■□□□□ 0.28
ITGB4-212ENST00000584558 NFKBIBQ15653 356 aa16.8■□□□□ 0.28
ITGB4-212ENST00000584558 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
ITGB4-212ENST00000584558 SYNMO15061 1565 aa16.79■□□□□ 0.28
ITGB4-212ENST00000584558 BACH2Q9BYV9 841 aa16.79■□□□□ 0.28
ITGB4-212ENST00000584558 PPLO60437 1756 aa16.78■□□□□ 0.28
ITGB4-212ENST00000584558 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
ITGB4-212ENST00000584558 DISP3Q9P2K9 1392 aa16.77■□□□□ 0.28
ITGB4-212ENST00000584558 SCAF11Q99590 1463 aaKnown RBP16.76■□□□□ 0.27
ITGB4-212ENST00000584558 CFAP65Q6ZU64 1925 aaKnown RBP16.76■□□□□ 0.27
ITGB4-212ENST00000584558 SLC4A3P48751 1232 aa16.75■□□□□ 0.27
ITGB4-212ENST00000584558 EXOC6Q8TAG9 804 aa16.75■□□□□ 0.27
ITGB4-212ENST00000584558 POLR3GLQ9BT43 218 aa16.75■□□□□ 0.27
ITGB4-212ENST00000584558 AGLP35573 1532 aa16.74■□□□□ 0.27
ITGB4-212ENST00000584558 ADGRF5Q8IZF2 1346 aa16.74■□□□□ 0.27
ITGB4-212ENST00000584558 DDRGK1Q96HY6 314 aa16.73■□□□□ 0.27
ITGB4-212ENST00000584558 FAM43AQ8N2R8 423 aa16.72■□□□□ 0.27
ITGB4-212ENST00000584558 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
ITGB4-212ENST00000584558 SETBP1Q9Y6X0 1596 aa16.72■□□□□ 0.27
ITGB4-212ENST00000584558 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.27
ITGB4-212ENST00000584558 MYO3AQ8NEV4 1616 aa16.7■□□□□ 0.26
ITGB4-212ENST00000584558 PIK3C2GO75747 1445 aa16.7■□□□□ 0.26
ITGB4-212ENST00000584558 GLIPR1L2Q4G1C9 344 aa16.7■□□□□ 0.26
ITGB4-212ENST00000584558 MS4A1P11836 297 aa16.69■□□□□ 0.26
ITGB4-212ENST00000584558 NEXMIFQ5QGS0 1516 aa16.69■□□□□ 0.26
ITGB4-212ENST00000584558 ARHGEF40Q8TER5 1519 aa16.69■□□□□ 0.26
ITGB4-212ENST00000584558 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
ITGB4-212ENST00000584558 TMF1P82094 1093 aa16.68■□□□□ 0.26
ITGB4-212ENST00000584558 CFAP70Q5T0N1 1121 aa16.68■□□□□ 0.26
ITGB4-212ENST00000584558 PER1O15534 1290 aaPredicted RBP16.67■□□□□ 0.26
ITGB4-212ENST00000584558 RRP1P56182 461 aaKnown RBP16.67■□□□□ 0.26
ITGB4-212ENST00000584558 SKAP1Q86WV1 359 aa16.67■□□□□ 0.26
ITGB4-212ENST00000584558 RPGRIP1LQ68CZ1 1315 aa16.67■□□□□ 0.26
ITGB4-212ENST00000584558 ADGRB1O14514 1584 aa16.67■□□□□ 0.26
ITGB4-212ENST00000584558 MYOM1P52179 1685 aa16.66■□□□□ 0.26
ITGB4-212ENST00000584558 VSIG10Q8N0Z9 540 aa16.66■□□□□ 0.26
ITGB4-212ENST00000584558 TMEM131LA2VDJ0 1609 aa16.65■□□□□ 0.26
ITGB4-212ENST00000584558 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
ITGB4-212ENST00000584558 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
ITGB4-212ENST00000584558 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.25
ITGB4-212ENST00000584558 FRAT2O75474 233 aaPredicted RBP16.63■□□□□ 0.25
ITGB4-212ENST00000584558 CLTCQ00610 1675 aaKnown RBP16.63■□□□□ 0.25
ITGB4-212ENST00000584558 ZMYND15Q9H091 742 aa16.63■□□□□ 0.25
ITGB4-212ENST00000584558 ERVK-7P63135 1459 aa16.63■□□□□ 0.25
ITGB4-212ENST00000584558 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
ITGB4-212ENST00000584558 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
ITGB4-212ENST00000584558 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms