RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 NUTM2BA6NNL0 878 aaPredicted RBP16.07■□□□□ 0.16
GGA3-219ENST00000584550 NUTM2EB1AL46 878 aaPredicted RBP16.07■□□□□ 0.16
GGA3-219ENST00000584550 RXRBP28702 533 aa16.07■□□□□ 0.16
GGA3-219ENST00000584550 NUTM2AQ8IVF1 878 aaPredicted RBP16.07■□□□□ 0.16
GGA3-219ENST00000584550 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
GGA3-219ENST00000584550 SPATA31A6Q5VVP1 1343 aa16.07■□□□□ 0.16
GGA3-219ENST00000584550 ABCC5O15440 1437 aa16.06■□□□□ 0.16
GGA3-219ENST00000584550 ADGRB3O60242 1522 aa16.05■□□□□ 0.16
GGA3-219ENST00000584550 PPP1R15AO75807 674 aaPredicted RBP16.05■□□□□ 0.16
GGA3-219ENST00000584550 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
GGA3-219ENST00000584550 CROCC2H7BZ55 1655 aa16.05■□□□□ 0.16
GGA3-219ENST00000584550 SRCAPQ6ZRS2 3230 aa16.04■□□□□ 0.16
GGA3-219ENST00000584550 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
GGA3-219ENST00000584550 MYO5BQ9ULV0 1848 aa16.03■□□□□ 0.16
GGA3-219ENST00000584550 NOS1P29475 1434 aa16.02■□□□□ 0.16
GGA3-219ENST00000584550 FGD6Q6ZV73 1430 aa16.02■□□□□ 0.16
GGA3-219ENST00000584550 ATF3P18847 181 aa16.02■□□□□ 0.16
GGA3-219ENST00000584550 SLC52A1Q9NWF4 448 aa16.02■□□□□ 0.16
GGA3-219ENST00000584550 LMTK2Q8IWU2 1503 aa16.01■□□□□ 0.15
GGA3-219ENST00000584550 DAPK1P53355 1430 aa16.01■□□□□ 0.15
GGA3-219ENST00000584550 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
GGA3-219ENST00000584550 PLEKHG1Q9ULL1 1385 aa16■□□□□ 0.15
GGA3-219ENST00000584550 SHPRHQ149N8 1683 aa16■□□□□ 0.15
GGA3-219ENST00000584550 CHGAP10645 457 aaKnown RBP16■□□□□ 0.15
GGA3-219ENST00000584550 PTPN23Q9H3S7 1636 aa16■□□□□ 0.15
GGA3-219ENST00000584550 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.99■□□□□ 0.15
GGA3-219ENST00000584550 AFF2P51816 1311 aa15.99■□□□□ 0.15
GGA3-219ENST00000584550 CADPS2Q86UW7 1296 aa15.99■□□□□ 0.15
GGA3-219ENST00000584550 ZFYVE9O95405 1425 aa15.99■□□□□ 0.15
GGA3-219ENST00000584550 RIMS2Q9UQ26 1411 aa15.99■□□□□ 0.15
GGA3-219ENST00000584550 HDGFP51858 240 aaKnown RBP15.98■□□□□ 0.15
GGA3-219ENST00000584550 C19orf44Q9H6X5 657 aa15.98■□□□□ 0.15
GGA3-219ENST00000584550 TBX22Q9Y458 520 aa15.98■□□□□ 0.15
GGA3-219ENST00000584550 AHDC1Q5TGY3 1603 aaPredicted RBP15.97■□□□□ 0.15
GGA3-219ENST00000584550 GCC2Q8IWJ2 1684 aa15.97■□□□□ 0.15
GGA3-219ENST00000584550 ANKRD30AQ9BXX3 1397 aa15.97■□□□□ 0.15
GGA3-219ENST00000584550 BRINP3Q76B58 766 aa15.96■□□□□ 0.15
GGA3-219ENST00000584550 NCOA3Q9Y6Q9 1424 aa15.95■□□□□ 0.14
GGA3-219ENST00000584550 C8orf37Q96NL8 207 aa15.95■□□□□ 0.14
GGA3-219ENST00000584550 QTRT2Q9H974 415 aaKnown RBP15.94■□□□□ 0.14
GGA3-219ENST00000584550 CDK12Q9NYV4 1490 aaPredicted RBP15.94■□□□□ 0.14
GGA3-219ENST00000584550 DIP2AQ14689 1571 aa15.94■□□□□ 0.14
GGA3-219ENST00000584550 TMEM131LA2VDJ0 1609 aa15.94■□□□□ 0.14
GGA3-219ENST00000584550 AMOTL2Q9Y2J4 779 aa15.93■□□□□ 0.14
GGA3-219ENST00000584550 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.92■□□□□ 0.14
GGA3-219ENST00000584550 RGS12O14924 1447 aa15.92■□□□□ 0.14
GGA3-219ENST00000584550 ADAMTS13Q76LX8 1427 aa15.92■□□□□ 0.14
GGA3-219ENST00000584550 DDX17Q92841 729 aaKnown RBP15.91■□□□□ 0.14
GGA3-219ENST00000584550 RBM6P78332 1123 aaKnown RBP15.9■□□□□ 0.14
GGA3-219ENST00000584550 RPRD2Q5VT52 1461 aaKnown RBP15.89■□□□□ 0.13
GGA3-219ENST00000584550 ASXL1Q8IXJ9 1541 aa15.89■□□□□ 0.13
GGA3-219ENST00000584550 PTPRUQ92729 1446 aa15.88■□□□□ 0.13
GGA3-219ENST00000584550 ADAMTS2O95450 1211 aa15.88■□□□□ 0.13
GGA3-219ENST00000584550 APLP2Q06481 763 aa15.88■□□□□ 0.13
GGA3-219ENST00000584550 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
GGA3-219ENST00000584550 NGLY1Q96IV0 654 aa15.87■□□□□ 0.13
GGA3-219ENST00000584550 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
GGA3-219ENST00000584550 PIK3R4Q99570 1358 aa15.86■□□□□ 0.13
GGA3-219ENST00000584550 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
GGA3-219ENST00000584550 ANKRD50Q9ULJ7 1429 aa15.85■□□□□ 0.13
GGA3-219ENST00000584550 TRPM2O94759 1503 aa15.84■□□□□ 0.13
GGA3-219ENST00000584550 MST1RQ04912 1400 aa15.84■□□□□ 0.13
GGA3-219ENST00000584550 NHSL1Q5SYE7 1610 aa15.83■□□□□ 0.13
GGA3-219ENST00000584550 PNPLA6Q8IY17 1366 aa15.83■□□□□ 0.12
GGA3-219ENST00000584550 ZRANB1Q9UGI0 708 aa15.82■□□□□ 0.12
GGA3-219ENST00000584550 E9PCH4 1651 aa15.81■□□□□ 0.12
GGA3-219ENST00000584550 ADGRL2O95490 1459 aa15.81■□□□□ 0.12
GGA3-219ENST00000584550 ATAD2Q6PL18 1390 aa15.81■□□□□ 0.12
GGA3-219ENST00000584550 UNC13BO14795 1591 aa15.8■□□□□ 0.12
GGA3-219ENST00000584550 DCCP43146 1447 aa15.8■□□□□ 0.12
GGA3-219ENST00000584550 USP21Q9UK80 565 aa15.8■□□□□ 0.12
GGA3-219ENST00000584550 EP400Q96L91 3159 aa15.78■□□□□ 0.12
GGA3-219ENST00000584550 SETBP1Q9Y6X0 1596 aa15.78■□□□□ 0.12
GGA3-219ENST00000584550 XRN1Q8IZH2 1706 aaKnown RBP15.77■□□□□ 0.12
GGA3-219ENST00000584550 METP08581 1390 aa15.77■□□□□ 0.12
GGA3-219ENST00000584550 NRXN3Q9Y4C0 1643 aa15.76■□□□□ 0.11
GGA3-219ENST00000584550 FOXD1Q16676 465 aa15.76■□□□□ 0.11
GGA3-219ENST00000584550 ZNF326Q5BKZ1 582 aaKnown RBP15.76■□□□□ 0.11
GGA3-219ENST00000584550 TRPC5Q9UL62 973 aaPredicted RBP15.76■□□□□ 0.11
GGA3-219ENST00000584550 ORAI2Q96SN7 254 aa15.73■□□□□ 0.11
GGA3-219ENST00000584550 ADGRL3Q9HAR2 1447 aa15.73■□□□□ 0.11
GGA3-219ENST00000584550 NALCNQ8IZF0 1738 aa15.73■□□□□ 0.11
GGA3-219ENST00000584550 C1orf167Q5SNV9 1468 aa15.71■□□□□ 0.11
GGA3-219ENST00000584550 FNBP4Q8N3X1 1017 aaPredicted RBP15.71■□□□□ 0.11
GGA3-219ENST00000584550 NUP155O75694 1391 aa15.71■□□□□ 0.11
GGA3-219ENST00000584550 SOS2Q07890 1332 aaPredicted RBP15.69■□□□□ 0.1
GGA3-219ENST00000584550 ATRNO75882 1429 aa15.69■□□□□ 0.1
GGA3-219ENST00000584550 IQGAP3Q86VI3 1631 aa15.69■□□□□ 0.1
GGA3-219ENST00000584550 CCDC125Q86Z20 511 aa15.68■□□□□ 0.1
GGA3-219ENST00000584550 PTCH1Q13635 1447 aa15.67■□□□□ 0.1
GGA3-219ENST00000584550 ITGAEP38570 1179 aa15.66■□□□□ 0.1
GGA3-219ENST00000584550 BCL9LQ86UU0 1499 aa15.65■□□□□ 0.1
GGA3-219ENST00000584550 XPCQ01831 940 aaPredicted RBP15.64■□□□□ 0.09
GGA3-219ENST00000584550 DEFB132Q7Z7B7 95 aa15.64■□□□□ 0.09
GGA3-219ENST00000584550 GJD4Q96KN9 370 aaPredicted RBP15.64■□□□□ 0.09
GGA3-219ENST00000584550 LAMC1P11047 1609 aa15.64■□□□□ 0.09
GGA3-219ENST00000584550 SPHKAPQ2M3C7 1700 aa15.63■□□□□ 0.09
GGA3-219ENST00000584550 ROBO2Q9HCK4 1378 aa15.62■□□□□ 0.09
GGA3-219ENST00000584550 ESCO1Q5FWF5 840 aa15.62■□□□□ 0.09
GGA3-219ENST00000584550 COL22A1Q8NFW1 1626 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms