RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 PXYLP1Q8TE99 480 aa9.36□□□□□ -0.91
PPP4R1-227ENST00000583988 NECTIN2Q92692 538 aa9.36□□□□□ -0.91
PPP4R1-227ENST00000583988 METTL3Q86U44 580 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-227ENST00000583988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-227ENST00000583988 MTRQ99707 1265 aa9.34□□□□□ -0.91
PPP4R1-227ENST00000583988 A0A0G2JS52 829 aa9.33□□□□□ -0.92
PPP4R1-227ENST00000583988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.33□□□□□ -0.92
PPP4R1-227ENST00000583988 TJAP1Q5JTD0 557 aa9.32□□□□□ -0.92
PPP4R1-227ENST00000583988 COPS2P61201 443 aa9.31□□□□□ -0.92
PPP4R1-227ENST00000583988 NLRP7Q8WX94 980 aa9.31□□□□□ -0.92
PPP4R1-227ENST00000583988 IL21Q9HBE4 155 aa9.3□□□□□ -0.92
PPP4R1-227ENST00000583988 ZNF516Q92618 1163 aa9.29□□□□□ -0.92
PPP4R1-227ENST00000583988 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
PPP4R1-227ENST00000583988 CFHP08603 1231 aa9.28□□□□□ -0.92
PPP4R1-227ENST00000583988 SLC10A3P09131 477 aa9.27□□□□□ -0.93
PPP4R1-227ENST00000583988 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
PPP4R1-227ENST00000583988 PCDHB3Q9Y5E6 796 aa9.27□□□□□ -0.93
PPP4R1-227ENST00000583988 KMT5BQ4FZB7 885 aa9.26□□□□□ -0.93
PPP4R1-227ENST00000583988 LMOD2Q6P5Q4 547 aa9.26□□□□□ -0.93
PPP4R1-227ENST00000583988 MAP2K5Q13163 448 aa9.25□□□□□ -0.93
PPP4R1-227ENST00000583988 RSPH4AQ5TD94 716 aa9.25□□□□□ -0.93
PPP4R1-227ENST00000583988 RDH13Q8NBN7 331 aa9.25□□□□□ -0.93
PPP4R1-227ENST00000583988 DAXXQ9UER7 740 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-227ENST00000583988 DDX11L8A8MPP1 907 aa9.24□□□□□ -0.93
PPP4R1-227ENST00000583988 BLOC1S3Q6QNY0 202 aa9.24□□□□□ -0.93
PPP4R1-227ENST00000583988 NKX2-3Q8TAU0 364 aa9.24□□□□□ -0.93
PPP4R1-227ENST00000583988 IRF6O14896 467 aa9.23□□□□□ -0.93
PPP4R1-227ENST00000583988 ACTN4O43707 911 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-227ENST00000583988 ZPR1O75312 459 aa9.21□□□□□ -0.94
PPP4R1-227ENST00000583988 RGS20O76081 388 aa9.21□□□□□ -0.94
PPP4R1-227ENST00000583988 MINK1Q8N4C8 1332 aaPredicted RBP9.21□□□□□ -0.94
PPP4R1-227ENST00000583988 PPP1R18Q6NYC8 613 aa9.2□□□□□ -0.94
PPP4R1-227ENST00000583988 CCDC102AQ96A19 550 aa9.2□□□□□ -0.94
PPP4R1-227ENST00000583988 SULF1Q8IWU6 871 aa9.19□□□□□ -0.94
PPP4R1-227ENST00000583988 KRI1Q8N9T8 703 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-227ENST00000583988 TLL1O43897 1013 aa9.18□□□□□ -0.94
PPP4R1-227ENST00000583988 PUS10Q3MIT2 529 aaKnown RBP9.18□□□□□ -0.94
PPP4R1-227ENST00000583988 MDM2Q00987 491 aaPredicted RBP9.17□□□□□ -0.94
PPP4R1-227ENST00000583988 ZC3H15Q8WU90 426 aaKnown RBP9.17□□□□□ -0.94
PPP4R1-227ENST00000583988 NR1I2O75469 434 aa9.15□□□□□ -0.94
PPP4R1-227ENST00000583988 GGCXP38435 758 aa9.15□□□□□ -0.94
PPP4R1-227ENST00000583988 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.15□□□□□ -0.94
PPP4R1-227ENST00000583988 GCGRP47871 477 aa9.14□□□□□ -0.95
PPP4R1-227ENST00000583988 FUT2Q10981 343 aa9.14□□□□□ -0.95
PPP4R1-227ENST00000583988 SCUBE3Q8IX30 993 aa9.14□□□□□ -0.95
PPP4R1-227ENST00000583988 ZMYND10O75800 440 aa9.13□□□□□ -0.95
PPP4R1-227ENST00000583988 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
PPP4R1-227ENST00000583988 BARGINQ6ZT62 677 aa9.12□□□□□ -0.95
PPP4R1-227ENST00000583988 IRX2Q9BZI1 471 aaPredicted RBP9.12□□□□□ -0.95
PPP4R1-227ENST00000583988 ATP6V1AP38606 617 aa9.11□□□□□ -0.95
PPP4R1-227ENST00000583988 PRKD2Q9BZL6 878 aa9.11□□□□□ -0.95
PPP4R1-227ENST00000583988 S1PR4O95977 384 aa9.1□□□□□ -0.95
PPP4R1-227ENST00000583988 CLCN1P35523 988 aa9.1□□□□□ -0.95
PPP4R1-227ENST00000583988 MORN1Q5T089 497 aa9.1□□□□□ -0.95
PPP4R1-227ENST00000583988 GPCPD1Q9NPB8 672 aa9.1□□□□□ -0.95
PPP4R1-227ENST00000583988 ADH1BP00325 375 aa9.09□□□□□ -0.95
PPP4R1-227ENST00000583988 CD46P15529 392 aa9.09□□□□□ -0.95
PPP4R1-227ENST00000583988 RNF223E7ERA6 249 aa9.08□□□□□ -0.96
PPP4R1-227ENST00000583988 PPEF1O14829 653 aaPredicted RBP9.08□□□□□ -0.96
PPP4R1-227ENST00000583988 SPSB2Q99619 263 aa9.08□□□□□ -0.96
PPP4R1-227ENST00000583988 TMUB1Q9BVT8 246 aa9.08□□□□□ -0.96
PPP4R1-227ENST00000583988 SLC27A5Q9Y2P5 690 aa9.08□□□□□ -0.96
PPP4R1-227ENST00000583988 PRKCSHP14314 528 aaPredicted RBP9.07□□□□□ -0.96
PPP4R1-227ENST00000583988 TTLL12Q14166 644 aaPredicted RBP9.07□□□□□ -0.96
PPP4R1-227ENST00000583988 SLC6A16Q9GZN6 736 aa9.07□□□□□ -0.96
PPP4R1-227ENST00000583988 KDM4AO75164 1064 aa9.06□□□□□ -0.96
PPP4R1-227ENST00000583988 GRIPAP1Q4V328 841 aa9.06□□□□□ -0.96
PPP4R1-227ENST00000583988 FAM217BQ9NTX9 383 aaPredicted RBP9.06□□□□□ -0.96
PPP4R1-227ENST00000583988 REPIN1Q9BWE0 567 aaKnown RBP9.05□□□□□ -0.96
PPP4R1-227ENST00000583988 FMNL1O95466 1100 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-227ENST00000583988 V9GY48 417 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1-227ENST00000583988 THAP11Q96EK4 314 aa9.03□□□□□ -0.96
PPP4R1-227ENST00000583988 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.97
PPP4R1-227ENST00000583988 RNF19BQ6ZMZ0 732 aa9.02□□□□□ -0.97
PPP4R1-227ENST00000583988 ANKLE1Q8NAG6 615 aa9.02□□□□□ -0.97
PPP4R1-227ENST00000583988 HLA-CQ95604 372 aa9.02□□□□□ -0.97
PPP4R1-227ENST00000583988 SLC19A1P41440 591 aa9.01□□□□□ -0.97
PPP4R1-227ENST00000583988 NUTM1Q86Y26 1132 aa9.01□□□□□ -0.97
PPP4R1-227ENST00000583988 AMHR2Q16671 573 aa9□□□□□ -0.97
PPP4R1-227ENST00000583988 BRICD5Q6PL45 260 aa9□□□□□ -0.97
PPP4R1-227ENST00000583988 FAM160A2Q8N612 972 aaPredicted RBP9□□□□□ -0.97
PPP4R1-227ENST00000583988 TRIM66O15016 1216 aa8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 HOXA2O43364 376 aa8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 GFRA3O60609 400 aa8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 USP46P62068 366 aa8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 GUCA2AQ02747 115 aa8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 Q3C1V9 767 aa8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 GIGYF2Q6Y7W6 1299 aaKnown RBP8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 EMID1Q96A84 441 aaPredicted RBP8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 AK7Q96M32 723 aa8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 SLC24A3Q9HC58 644 aa8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 PRDM9Q9NQV7 894 aa8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 SALL2Q9Y467 1007 aaPredicted RBP8.99□□□□□ -0.97
PPP4R1-227ENST00000583988 PLA2G2CQ5R387 149 aa8.97□□□□□ -0.97
PPP4R1-227ENST00000583988 Q6ZNB5 142 aa8.97□□□□□ -0.97
PPP4R1-227ENST00000583988 LIAT1Q6ZQX7 453 aa8.97□□□□□ -0.97
PPP4R1-227ENST00000583988 PARP9Q8IXQ6 854 aa8.96□□□□□ -0.98
PPP4R1-227ENST00000583988 PDZRN3Q9UPQ7 1066 aa8.96□□□□□ -0.98
PPP4R1-227ENST00000583988 FCF1Q9Y324 198 aaKnown RBP8.96□□□□□ -0.98
PPP4R1-227ENST00000583988 LAPTM4AQ15012 233 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms