RNA–Protein interactions for RNA: ENST00000583972.1

SUPT6H-209, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 2

Gene SUPT6H, Length 1,969 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-209ENST00000583972 SLIT1O75093 1534 aa17.24■□□□□ 0.35
SUPT6H-209ENST00000583972 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
SUPT6H-209ENST00000583972 SCAF11Q99590 1463 aaKnown RBP17.23■□□□□ 0.35
SUPT6H-209ENST00000583972 MPHOSPH9Q99550 1183 aa17.23■□□□□ 0.35
SUPT6H-209ENST00000583972 STRCP1A6NGW2 1772 aa17.23■□□□□ 0.35
SUPT6H-209ENST00000583972 UNC13BO14795 1591 aa17.22■□□□□ 0.35
SUPT6H-209ENST00000583972 KDM5AP29375 1690 aaKnown RBP17.21■□□□□ 0.35
SUPT6H-209ENST00000583972 TET3O43151 1660 aa17.2■□□□□ 0.34
SUPT6H-209ENST00000583972 NOS1P29475 1434 aa17.2■□□□□ 0.34
SUPT6H-209ENST00000583972 UBAP1LF5GYI3 381 aa17.19■□□□□ 0.34
SUPT6H-209ENST00000583972 ADGRB3O60242 1522 aa17.18■□□□□ 0.34
SUPT6H-209ENST00000583972 LTKP29376 864 aa17.17■□□□□ 0.34
SUPT6H-209ENST00000583972 RPRD2Q5VT52 1461 aaKnown RBP17.17■□□□□ 0.34
SUPT6H-209ENST00000583972 TMEM2Q9UHN6 1383 aa17.16■□□□□ 0.34
SUPT6H-209ENST00000583972 ANKRD30BQ9BXX2 1392 aa17.15■□□□□ 0.34
SUPT6H-209ENST00000583972 IDI1Q13907 227 aa17.15■□□□□ 0.34
SUPT6H-209ENST00000583972 IQGAP3Q86VI3 1631 aa17.15■□□□□ 0.34
SUPT6H-209ENST00000583972 ALKQ9UM73 1620 aa17.15■□□□□ 0.34
SUPT6H-209ENST00000583972 LRRC7Q96NW7 1537 aa17.14■□□□□ 0.33
SUPT6H-209ENST00000583972 E9PCH4 1651 aa17.14■□□□□ 0.33
SUPT6H-209ENST00000583972 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
SUPT6H-209ENST00000583972 MYO5BQ9ULV0 1848 aa17.13■□□□□ 0.33
SUPT6H-209ENST00000583972 HSPA5P11021 654 aaKnown RBP17.13■□□□□ 0.33
SUPT6H-209ENST00000583972 L3MBTL2Q969R5 705 aa17.12■□□□□ 0.33
SUPT6H-209ENST00000583972 STAG3Q9UJ98 1225 aa17.12■□□□□ 0.33
SUPT6H-209ENST00000583972 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
SUPT6H-209ENST00000583972 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
SUPT6H-209ENST00000583972 WASHC2AQ641Q2 1341 aa17.1■□□□□ 0.33
SUPT6H-209ENST00000583972 FOXD1Q16676 465 aa17.09■□□□□ 0.33
SUPT6H-209ENST00000583972 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
SUPT6H-209ENST00000583972 TMEM131LA2VDJ0 1609 aa17.09■□□□□ 0.33
SUPT6H-209ENST00000583972 DISP3Q9P2K9 1392 aa17.08■□□□□ 0.33
SUPT6H-209ENST00000583972 PIP4K2BP78356 416 aa17.08■□□□□ 0.32
SUPT6H-209ENST00000583972 SLC52A1Q9NWF4 448 aa17.08■□□□□ 0.32
SUPT6H-209ENST00000583972 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
SUPT6H-209ENST00000583972 ZFYVE9O95405 1425 aa17.06■□□□□ 0.32
SUPT6H-209ENST00000583972 TOM1O60784 492 aa17.06■□□□□ 0.32
SUPT6H-209ENST00000583972 NUP155O75694 1391 aa17.04■□□□□ 0.32
SUPT6H-209ENST00000583972 NWD1Q149M9 1564 aa17.03■□□□□ 0.32
SUPT6H-209ENST00000583972 HSPA1LP34931 641 aa17.02■□□□□ 0.32
SUPT6H-209ENST00000583972 RIMS2Q9UQ26 1411 aa17.02■□□□□ 0.31
SUPT6H-209ENST00000583972 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
SUPT6H-209ENST00000583972 NBPF8Q3BBV2 869 aa17.01■□□□□ 0.31
SUPT6H-209ENST00000583972 SLC26A8Q96RN1 970 aa17■□□□□ 0.31
SUPT6H-209ENST00000583972 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
SUPT6H-209ENST00000583972 FKBP8Q14318 412 aa16.99■□□□□ 0.31
SUPT6H-209ENST00000583972 PLEKHG1Q9ULL1 1385 aa16.99■□□□□ 0.31
SUPT6H-209ENST00000583972 SPATA31E1Q6ZUB1 1445 aa16.99■□□□□ 0.31
SUPT6H-209ENST00000583972 ILDR2Q71H61 639 aa16.98■□□□□ 0.31
SUPT6H-209ENST00000583972 SENP3Q9H4L4 574 aaPredicted RBP16.98■□□□□ 0.31
SUPT6H-209ENST00000583972 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
SUPT6H-209ENST00000583972 NEFLP07196 543 aa16.97■□□□□ 0.31
SUPT6H-209ENST00000583972 TMEM94Q12767 1356 aa16.96■□□□□ 0.31
SUPT6H-209ENST00000583972 MED1Q15648 1581 aaPredicted RBP16.96■□□□□ 0.31
SUPT6H-209ENST00000583972 C11orf95C9JLR9 678 aaPredicted RBP16.96■□□□□ 0.31
SUPT6H-209ENST00000583972 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.31
SUPT6H-209ENST00000583972 KCNA6P17658 529 aa16.96■□□□□ 0.31
SUPT6H-209ENST00000583972 CHD2O14647 1828 aaKnown RBP16.95■□□□□ 0.3
SUPT6H-209ENST00000583972 BCANQ96GW7 911 aa16.94■□□□□ 0.3
SUPT6H-209ENST00000583972 CLTCL1P53675 1640 aa16.93■□□□□ 0.3
SUPT6H-209ENST00000583972 DIP2AQ14689 1571 aa16.93■□□□□ 0.3
SUPT6H-209ENST00000583972 ADAMTS13Q76LX8 1427 aa16.93■□□□□ 0.3
SUPT6H-209ENST00000583972 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
SUPT6H-209ENST00000583972 RBM33Q96EV2 1170 aaKnown RBP16.93■□□□□ 0.3
SUPT6H-209ENST00000583972 TRPM2O94759 1503 aa16.92■□□□□ 0.3
SUPT6H-209ENST00000583972 TSHZ2Q9NRE2 1034 aa16.92■□□□□ 0.3
SUPT6H-209ENST00000583972 NRXN3Q9Y4C0 1643 aa16.91■□□□□ 0.3
SUPT6H-209ENST00000583972 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
SUPT6H-209ENST00000583972 PRKRIP1Q9H875 184 aaPredicted RBP16.91■□□□□ 0.3
SUPT6H-209ENST00000583972 KIF7Q2M1P5 1343 aa16.9■□□□□ 0.3
SUPT6H-209ENST00000583972 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.9■□□□□ 0.3
SUPT6H-209ENST00000583972 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.3
SUPT6H-209ENST00000583972 ROBO1Q9Y6N7 1651 aa16.89■□□□□ 0.29
SUPT6H-209ENST00000583972 PROSER2Q86WR7 435 aaPredicted RBP16.89■□□□□ 0.29
SUPT6H-209ENST00000583972 SETBP1Q9Y6X0 1596 aa16.87■□□□□ 0.29
SUPT6H-209ENST00000583972 TBX22Q9Y458 520 aa16.86■□□□□ 0.29
SUPT6H-209ENST00000583972 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
SUPT6H-209ENST00000583972 FAM135BQ49AJ0 1406 aa16.86■□□□□ 0.29
SUPT6H-209ENST00000583972 KIF1BO60333 1816 aa16.85■□□□□ 0.29
SUPT6H-209ENST00000583972 MSH6P52701 1360 aa16.85■□□□□ 0.29
SUPT6H-209ENST00000583972 USP47Q96K76 1375 aa16.84■□□□□ 0.29
SUPT6H-209ENST00000583972 PIK3R4Q99570 1358 aa16.84■□□□□ 0.29
SUPT6H-209ENST00000583972 XRN1Q8IZH2 1706 aaKnown RBP16.84■□□□□ 0.29
SUPT6H-209ENST00000583972 PTPRUQ92729 1446 aa16.84■□□□□ 0.29
SUPT6H-209ENST00000583972 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
SUPT6H-209ENST00000583972 RALGAPBQ86X10 1494 aa16.81■□□□□ 0.28
SUPT6H-209ENST00000583972 SOCS7O14512 581 aa16.81■□□□□ 0.28
SUPT6H-209ENST00000583972 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
SUPT6H-209ENST00000583972 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.81■□□□□ 0.28
SUPT6H-209ENST00000583972 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
SUPT6H-209ENST00000583972 NCOA3Q9Y6Q9 1424 aa16.8■□□□□ 0.28
SUPT6H-209ENST00000583972 SETD1AO15047 1707 aaKnown RBP16.78■□□□□ 0.28
SUPT6H-209ENST00000583972 PHLPP1O60346 1717 aa16.78■□□□□ 0.28
SUPT6H-209ENST00000583972 METP08581 1390 aa16.77■□□□□ 0.28
SUPT6H-209ENST00000583972 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.27
SUPT6H-209ENST00000583972 ZBED9Q6R2W3 1325 aa16.76■□□□□ 0.27
SUPT6H-209ENST00000583972 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
SUPT6H-209ENST00000583972 SLAIN2Q9P270 581 aa16.76■□□□□ 0.27
SUPT6H-209ENST00000583972 PPLO60437 1756 aa16.76■□□□□ 0.27
SUPT6H-209ENST00000583972 ROCK2O75116 1388 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms