RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ERBINQ96RT1 1412 aa17.63■□□□□ 0.41
CASC3-208ENST00000583649 SLC52A1Q9NWF4 448 aa17.62■□□□□ 0.41
CASC3-208ENST00000583649 MYOM3Q5VTT5 1437 aa17.62■□□□□ 0.41
CASC3-208ENST00000583649 NWD1Q149M9 1564 aa17.62■□□□□ 0.41
CASC3-208ENST00000583649 KIF15Q9NS87 1388 aa17.61■□□□□ 0.41
CASC3-208ENST00000583649 TET3O43151 1660 aa17.61■□□□□ 0.41
CASC3-208ENST00000583649 COL16A1Q07092 1604 aaPredicted RBP17.58■□□□□ 0.41
CASC3-208ENST00000583649 C19orf44Q9H6X5 657 aa17.58■□□□□ 0.4
CASC3-208ENST00000583649 RRP7BPQ9NSQ0 103 aa17.58■□□□□ 0.4
CASC3-208ENST00000583649 LRP6O75581 1613 aa17.58■□□□□ 0.4
CASC3-208ENST00000583649 NUTM2BA6NNL0 878 aaPredicted RBP17.57■□□□□ 0.4
CASC3-208ENST00000583649 NUTM2EB1AL46 878 aaPredicted RBP17.57■□□□□ 0.4
CASC3-208ENST00000583649 NUTM2AQ8IVF1 878 aaPredicted RBP17.57■□□□□ 0.4
CASC3-208ENST00000583649 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.55■□□□□ 0.4
CASC3-208ENST00000583649 PLEKHG1Q9ULL1 1385 aa17.54■□□□□ 0.4
CASC3-208ENST00000583649 AFF2P51816 1311 aa17.54■□□□□ 0.4
CASC3-208ENST00000583649 ADGRB3O60242 1522 aa17.54■□□□□ 0.4
CASC3-208ENST00000583649 RBM6P78332 1123 aaKnown RBP17.54■□□□□ 0.4
CASC3-208ENST00000583649 NUTM2DQ5VT03 806 aaPredicted RBP17.54■□□□□ 0.4
CASC3-208ENST00000583649 NGLY1Q96IV0 654 aa17.54■□□□□ 0.4
CASC3-208ENST00000583649 TBX22Q9Y458 520 aa17.54■□□□□ 0.4
CASC3-208ENST00000583649 SHPRHQ149N8 1683 aa17.54■□□□□ 0.4
CASC3-208ENST00000583649 ZRANB1Q9UGI0 708 aa17.53■□□□□ 0.4
CASC3-208ENST00000583649 AHDC1Q5TGY3 1603 aaPredicted RBP17.53■□□□□ 0.4
CASC3-208ENST00000583649 QTRT2Q9H974 415 aaKnown RBP17.51■□□□□ 0.39
CASC3-208ENST00000583649 LMTK2Q8IWU2 1503 aa17.51■□□□□ 0.39
CASC3-208ENST00000583649 LRRC59Q96AG4 307 aaKnown RBP17.5■□□□□ 0.39
CASC3-208ENST00000583649 ATAD2Q6PL18 1390 aa17.5■□□□□ 0.39
CASC3-208ENST00000583649 PIK3R4Q99570 1358 aa17.49■□□□□ 0.39
CASC3-208ENST00000583649 NOS1P29475 1434 aa17.48■□□□□ 0.39
CASC3-208ENST00000583649 C8orf37Q96NL8 207 aa17.48■□□□□ 0.39
CASC3-208ENST00000583649 ANKRD30AQ9BXX3 1397 aa17.48■□□□□ 0.39
CASC3-208ENST00000583649 CHD2O14647 1828 aaKnown RBP17.47■□□□□ 0.39
CASC3-208ENST00000583649 BRINP3Q76B58 766 aa17.47■□□□□ 0.39
CASC3-208ENST00000583649 RIMS2Q9UQ26 1411 aa17.47■□□□□ 0.39
CASC3-208ENST00000583649 RPRD2Q5VT52 1461 aaKnown RBP17.45■□□□□ 0.38
CASC3-208ENST00000583649 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
CASC3-208ENST00000583649 RGS12O14924 1447 aa17.44■□□□□ 0.38
CASC3-208ENST00000583649 ABCC5O15440 1437 aa17.44■□□□□ 0.38
CASC3-208ENST00000583649 ZFYVE9O95405 1425 aa17.44■□□□□ 0.38
CASC3-208ENST00000583649 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
CASC3-208ENST00000583649 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
CASC3-208ENST00000583649 DCCP43146 1447 aa17.43■□□□□ 0.38
CASC3-208ENST00000583649 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.43■□□□□ 0.38
CASC3-208ENST00000583649 DIP2AQ14689 1571 aa17.42■□□□□ 0.38
CASC3-208ENST00000583649 DAPK1P53355 1430 aa17.4■□□□□ 0.38
CASC3-208ENST00000583649 APLP2Q06481 763 aa17.4■□□□□ 0.38
CASC3-208ENST00000583649 AMOTL2Q9Y2J4 779 aa17.4■□□□□ 0.38
CASC3-208ENST00000583649 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.38
CASC3-208ENST00000583649 CROCC2H7BZ55 1655 aa17.39■□□□□ 0.37
CASC3-208ENST00000583649 ASXL1Q8IXJ9 1541 aa17.38■□□□□ 0.37
CASC3-208ENST00000583649 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
CASC3-208ENST00000583649 TRPC5Q9UL62 973 aaPredicted RBP17.38■□□□□ 0.37
CASC3-208ENST00000583649 TRPM2O94759 1503 aa17.37■□□□□ 0.37
CASC3-208ENST00000583649 SRCAPQ6ZRS2 3230 aa17.37■□□□□ 0.37
CASC3-208ENST00000583649 KANK4Q5T7N3 995 aaPredicted RBP17.37■□□□□ 0.37
CASC3-208ENST00000583649 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
CASC3-208ENST00000583649 USP21Q9UK80 565 aa17.36■□□□□ 0.37
CASC3-208ENST00000583649 PTPN23Q9H3S7 1636 aa17.35■□□□□ 0.37
CASC3-208ENST00000583649 ADAMTS13Q76LX8 1427 aa17.34■□□□□ 0.37
CASC3-208ENST00000583649 TMEM131LA2VDJ0 1609 aa17.33■□□□□ 0.37
CASC3-208ENST00000583649 PNPLA6Q8IY17 1366 aa17.33■□□□□ 0.36
CASC3-208ENST00000583649 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
CASC3-208ENST00000583649 MST1RQ04912 1400 aa17.3■□□□□ 0.36
CASC3-208ENST00000583649 NHSL1Q5SYE7 1610 aa17.29■□□□□ 0.36
CASC3-208ENST00000583649 ANKRD50Q9ULJ7 1429 aa17.29■□□□□ 0.36
CASC3-208ENST00000583649 PTCH1Q13635 1447 aa17.28■□□□□ 0.36
CASC3-208ENST00000583649 MYO5BQ9ULV0 1848 aa17.27■□□□□ 0.36
CASC3-208ENST00000583649 SF3B2Q13435 895 aaKnown RBP17.27■□□□□ 0.36
CASC3-208ENST00000583649 FNBP4Q8N3X1 1017 aaPredicted RBP17.27■□□□□ 0.36
CASC3-208ENST00000583649 SETBP1Q9Y6X0 1596 aa17.24■□□□□ 0.35
CASC3-208ENST00000583649 PTPRUQ92729 1446 aa17.24■□□□□ 0.35
CASC3-208ENST00000583649 DDX17Q92841 729 aaKnown RBP17.24■□□□□ 0.35
CASC3-208ENST00000583649 ADGRL2O95490 1459 aa17.24■□□□□ 0.35
CASC3-208ENST00000583649 ADGRL3Q9HAR2 1447 aa17.23■□□□□ 0.35
CASC3-208ENST00000583649 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
CASC3-208ENST00000583649 ATRNO75882 1429 aa17.21■□□□□ 0.35
CASC3-208ENST00000583649 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.34
CASC3-208ENST00000583649 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
CASC3-208ENST00000583649 BLMP54132 1417 aaPredicted RBP17.2■□□□□ 0.34
CASC3-208ENST00000583649 UNC13BO14795 1591 aa17.19■□□□□ 0.34
CASC3-208ENST00000583649 GJD4Q96KN9 370 aaPredicted RBP17.19■□□□□ 0.34
CASC3-208ENST00000583649 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
CASC3-208ENST00000583649 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
CASC3-208ENST00000583649 NPHP3Q7Z494 1330 aa17.15■□□□□ 0.34
CASC3-208ENST00000583649 METP08581 1390 aa17.15■□□□□ 0.34
CASC3-208ENST00000583649 ORAI2Q96SN7 254 aa17.13■□□□□ 0.33
CASC3-208ENST00000583649 LRPPRCP42704 1394 aaKnown RBP17.13■□□□□ 0.33
CASC3-208ENST00000583649 LAMC1P11047 1609 aa17.12■□□□□ 0.33
CASC3-208ENST00000583649 E9PCH4 1651 aa17.12■□□□□ 0.33
CASC3-208ENST00000583649 IQGAP3Q86VI3 1631 aa17.11■□□□□ 0.33
CASC3-208ENST00000583649 UNC5CLQ8IV45 518 aa17.11■□□□□ 0.33
CASC3-208ENST00000583649 NUP155O75694 1391 aa17.11■□□□□ 0.33
CASC3-208ENST00000583649 BCL9LQ86UU0 1499 aa17.11■□□□□ 0.33
CASC3-208ENST00000583649 EP400Q96L91 3159 aa17.09■□□□□ 0.33
CASC3-208ENST00000583649 ESCO1Q5FWF5 840 aa17.09■□□□□ 0.33
CASC3-208ENST00000583649 LRP5O75197 1615 aa17.09■□□□□ 0.33
CASC3-208ENST00000583649 COL22A1Q8NFW1 1626 aaPredicted RBP17.09■□□□□ 0.33
CASC3-208ENST00000583649 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
CASC3-208ENST00000583649 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms