RNA–Protein interactions for RNA: ENST00000583634.1

TSEN54-210, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-210ENST00000583634 RGS17Q9UGC6 210 aaPredicted RBP17.97■□□□□ 0.47
TSEN54-210ENST00000583634 TMEM94Q12767 1356 aa17.94■□□□□ 0.46
TSEN54-210ENST00000583634 EFCAB6Q5THR3 1501 aa17.94■□□□□ 0.46
TSEN54-210ENST00000583634 KCNA6P17658 529 aa17.94■□□□□ 0.46
TSEN54-210ENST00000583634 LMTK2Q8IWU2 1503 aa17.93■□□□□ 0.46
TSEN54-210ENST00000583634 PROSER2Q86WR7 435 aaPredicted RBP17.92■□□□□ 0.46
TSEN54-210ENST00000583634 FAM135BQ49AJ0 1406 aa17.91■□□□□ 0.46
TSEN54-210ENST00000583634 TET3O43151 1660 aa17.91■□□□□ 0.46
TSEN54-210ENST00000583634 NOS1P29475 1434 aa17.9■□□□□ 0.46
TSEN54-210ENST00000583634 TRIM52Q96A61 297 aa17.9■□□□□ 0.46
TSEN54-210ENST00000583634 BCANQ96GW7 911 aa17.9■□□□□ 0.46
TSEN54-210ENST00000583634 KDM5AP29375 1690 aaKnown RBP17.9■□□□□ 0.46
TSEN54-210ENST00000583634 SLC52A1Q9NWF4 448 aa17.87■□□□□ 0.45
TSEN54-210ENST00000583634 CCER1Q8TC90 406 aaPredicted RBP17.86■□□□□ 0.45
TSEN54-210ENST00000583634 ADGRB3O60242 1522 aa17.86■□□□□ 0.45
TSEN54-210ENST00000583634 ROBO1Q9Y6N7 1651 aa17.86■□□□□ 0.45
TSEN54-210ENST00000583634 POTEAQ6S8J7 498 aa17.85■□□□□ 0.45
TSEN54-210ENST00000583634 UNC13BO14795 1591 aa17.84■□□□□ 0.45
TSEN54-210ENST00000583634 DHX57Q6P158 1386 aaKnown RBP17.84■□□□□ 0.45
TSEN54-210ENST00000583634 NUP155O75694 1391 aa17.82■□□□□ 0.44
TSEN54-210ENST00000583634 NWD1Q149M9 1564 aa17.82■□□□□ 0.44
TSEN54-210ENST00000583634 MYO5BQ9ULV0 1848 aa17.82■□□□□ 0.44
TSEN54-210ENST00000583634 SLAIN2Q9P270 581 aa17.81■□□□□ 0.44
TSEN54-210ENST00000583634 NKTRP30414 1462 aaKnown RBP17.81■□□□□ 0.44
TSEN54-210ENST00000583634 MSH6P52701 1360 aa17.8■□□□□ 0.44
TSEN54-210ENST00000583634 CLSPNQ9HAW4 1339 aa17.8■□□□□ 0.44
TSEN54-210ENST00000583634 PPP1R15AO75807 674 aaPredicted RBP17.8■□□□□ 0.44
TSEN54-210ENST00000583634 MPHOSPH9Q99550 1183 aa17.8■□□□□ 0.44
TSEN54-210ENST00000583634 ZFYVE9O95405 1425 aa17.8■□□□□ 0.44
TSEN54-210ENST00000583634 RIMS2Q9UQ26 1411 aa17.8■□□□□ 0.44
TSEN54-210ENST00000583634 CHGAP10645 457 aaKnown RBP17.79■□□□□ 0.44
TSEN54-210ENST00000583634 NUTM2DQ5VT03 806 aaPredicted RBP17.79■□□□□ 0.44
TSEN54-210ENST00000583634 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
TSEN54-210ENST00000583634 RPRD2Q5VT52 1461 aaKnown RBP17.79■□□□□ 0.44
TSEN54-210ENST00000583634 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
TSEN54-210ENST00000583634 IQGAP3Q86VI3 1631 aa17.78■□□□□ 0.44
TSEN54-210ENST00000583634 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.44
TSEN54-210ENST00000583634 TMEM131LA2VDJ0 1609 aa17.76■□□□□ 0.43
TSEN54-210ENST00000583634 HDGFP51858 240 aaKnown RBP17.76■□□□□ 0.43
TSEN54-210ENST00000583634 TBX22Q9Y458 520 aa17.75■□□□□ 0.43
TSEN54-210ENST00000583634 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
TSEN54-210ENST00000583634 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
TSEN54-210ENST00000583634 JCADQ9P266 1359 aa17.72■□□□□ 0.43
TSEN54-210ENST00000583634 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.72■□□□□ 0.43
TSEN54-210ENST00000583634 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
TSEN54-210ENST00000583634 E9PCH4 1651 aa17.71■□□□□ 0.42
TSEN54-210ENST00000583634 ZEB1P37275 1124 aaPredicted RBP17.69■□□□□ 0.42
TSEN54-210ENST00000583634 COL16A1Q07092 1604 aaPredicted RBP17.68■□□□□ 0.42
TSEN54-210ENST00000583634 NCOA3Q9Y6Q9 1424 aa17.67■□□□□ 0.42
TSEN54-210ENST00000583634 C19orf44Q9H6X5 657 aa17.67■□□□□ 0.42
TSEN54-210ENST00000583634 SETD1AO15047 1707 aaKnown RBP17.67■□□□□ 0.42
TSEN54-210ENST00000583634 ATF3P18847 181 aa17.66■□□□□ 0.42
TSEN54-210ENST00000583634 CADPS2Q86UW7 1296 aa17.66■□□□□ 0.42
TSEN54-210ENST00000583634 AMOTL2Q9Y2J4 779 aa17.66■□□□□ 0.42
TSEN54-210ENST00000583634 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.66■□□□□ 0.42
TSEN54-210ENST00000583634 LRP6O75581 1613 aa17.65■□□□□ 0.42
TSEN54-210ENST00000583634 ANKRD30BQ9BXX2 1392 aa17.65■□□□□ 0.42
TSEN54-210ENST00000583634 PTPRUQ92729 1446 aa17.64■□□□□ 0.42
TSEN54-210ENST00000583634 FOXD1Q16676 465 aa17.64■□□□□ 0.41
TSEN54-210ENST00000583634 PIK3R4Q99570 1358 aa17.64■□□□□ 0.41
TSEN54-210ENST00000583634 MEX3CQ5U5Q3 659 aaKnown RBP17.63■□□□□ 0.41
TSEN54-210ENST00000583634 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
TSEN54-210ENST00000583634 DIP2AQ14689 1571 aa17.62■□□□□ 0.41
TSEN54-210ENST00000583634 BRINP3Q76B58 766 aa17.61■□□□□ 0.41
TSEN54-210ENST00000583634 TRPM2O94759 1503 aa17.6■□□□□ 0.41
TSEN54-210ENST00000583634 AHDC1Q5TGY3 1603 aaPredicted RBP17.6■□□□□ 0.41
TSEN54-210ENST00000583634 SPHKAPQ2M3C7 1700 aa17.58■□□□□ 0.41
TSEN54-210ENST00000583634 NUTM2BA6NNL0 878 aaPredicted RBP17.58■□□□□ 0.4
TSEN54-210ENST00000583634 NUTM2EB1AL46 878 aaPredicted RBP17.58■□□□□ 0.4
TSEN54-210ENST00000583634 ZNF772Q68DY9 489 aaPredicted RBP17.58■□□□□ 0.4
TSEN54-210ENST00000583634 NUTM2AQ8IVF1 878 aaPredicted RBP17.58■□□□□ 0.4
TSEN54-210ENST00000583634 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.4
TSEN54-210ENST00000583634 NEUROD1Q13562 356 aa17.57■□□□□ 0.4
TSEN54-210ENST00000583634 ZNF326Q5BKZ1 582 aaKnown RBP17.57■□□□□ 0.4
TSEN54-210ENST00000583634 TIMELESSQ9UNS1 1208 aa17.57■□□□□ 0.4
TSEN54-210ENST00000583634 SHPRHQ149N8 1683 aa17.56■□□□□ 0.4
TSEN54-210ENST00000583634 NRXN3Q9Y4C0 1643 aa17.56■□□□□ 0.4
TSEN54-210ENST00000583634 METP08581 1390 aa17.55■□□□□ 0.4
TSEN54-210ENST00000583634 UPF1Q92900 1129 aaKnown RBP eCLIP17.54■□□□□ 0.4
TSEN54-210ENST00000583634 CCDC144AA2RUR9 1427 aa17.54■□□□□ 0.4
TSEN54-210ENST00000583634 XRN1Q8IZH2 1706 aaKnown RBP17.53■□□□□ 0.4
TSEN54-210ENST00000583634 DDX17Q92841 729 aaKnown RBP17.53■□□□□ 0.4
TSEN54-210ENST00000583634 MST1RQ04912 1400 aa17.53■□□□□ 0.4
TSEN54-210ENST00000583634 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
TSEN54-210ENST00000583634 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.4
TSEN54-210ENST00000583634 RXRBP28702 533 aa17.52■□□□□ 0.4
TSEN54-210ENST00000583634 DCCP43146 1447 aa17.52■□□□□ 0.4
TSEN54-210ENST00000583634 TONSLQ96HA7 1378 aa17.5■□□□□ 0.39
TSEN54-210ENST00000583634 AFF2P51816 1311 aa17.49■□□□□ 0.39
TSEN54-210ENST00000583634 LRRC59Q96AG4 307 aaKnown RBP17.48■□□□□ 0.39
TSEN54-210ENST00000583634 KIF1BO60333 1816 aa17.48■□□□□ 0.39
TSEN54-210ENST00000583634 NHSL1Q5SYE7 1610 aa17.47■□□□□ 0.39
TSEN54-210ENST00000583634 CLTCL1P53675 1640 aa17.47■□□□□ 0.39
TSEN54-210ENST00000583634 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
TSEN54-210ENST00000583634 NEXMIFQ5QGS0 1516 aa17.46■□□□□ 0.39
TSEN54-210ENST00000583634 ADGRL3Q9HAR2 1447 aa17.46■□□□□ 0.39
TSEN54-210ENST00000583634 PNPLA6Q8IY17 1366 aa17.44■□□□□ 0.38
TSEN54-210ENST00000583634 NALCNQ8IZF0 1738 aa17.44■□□□□ 0.38
TSEN54-210ENST00000583634 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
TSEN54-210ENST00000583634 ADAMTS2O95450 1211 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms