RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 MYO3AQ8NEV4 1616 aa20.78■□□□□ 0.92
SENP3-208ENST00000583277 UBR1Q8IWV7 1749 aa20.78■□□□□ 0.92
SENP3-208ENST00000583277 STAG3Q9UJ98 1225 aa20.78■□□□□ 0.92
SENP3-208ENST00000583277 CEBPAP49715 358 aaPredicted RBP20.77■□□□□ 0.92
SENP3-208ENST00000583277 ZNF316A6NFI3 1004 aaPredicted RBP20.76■□□□□ 0.91
SENP3-208ENST00000583277 ZFYVE9O95405 1425 aa20.76■□□□□ 0.91
SENP3-208ENST00000583277 ROCK2O75116 1388 aaKnown RBP20.75■□□□□ 0.91
SENP3-208ENST00000583277 SETD1BQ9UPS6 1966 aaKnown RBP20.74■□□□□ 0.91
SENP3-208ENST00000583277 GPRASP1Q5JY77 1395 aa20.73■□□□□ 0.91
SENP3-208ENST00000583277 PIK3C2GO75747 1445 aa20.73■□□□□ 0.91
SENP3-208ENST00000583277 VGFO15240 615 aaPredicted RBP20.72■□□□□ 0.91
SENP3-208ENST00000583277 PTPRMP28827 1452 aa20.72■□□□□ 0.91
SENP3-208ENST00000583277 ZNF142P52746 1687 aaPredicted RBP20.72■□□□□ 0.91
SENP3-208ENST00000583277 EIF4G2P78344 907 aaKnown RBP eCLIP20.71■□□□□ 0.91
SENP3-208ENST00000583277 ADGRF5Q8IZF2 1346 aa20.71■□□□□ 0.91
SENP3-208ENST00000583277 CEP170BQ9Y4F5 1589 aaPredicted RBP20.7■□□□□ 0.9
SENP3-208ENST00000583277 RIMS2Q9UQ26 1411 aa20.69■□□□□ 0.9
SENP3-208ENST00000583277 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
SENP3-208ENST00000583277 CARD11Q9BXL7 1154 aa20.68■□□□□ 0.9
SENP3-208ENST00000583277 SETBP1Q9Y6X0 1596 aa20.68■□□□□ 0.9
SENP3-208ENST00000583277 USP47Q96K76 1375 aa20.68■□□□□ 0.9
SENP3-208ENST00000583277 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.66■□□□□ 0.9
SENP3-208ENST00000583277 TMEM2Q9UHN6 1383 aa20.66■□□□□ 0.9
SENP3-208ENST00000583277 IQGAP1P46940 1657 aa20.66■□□□□ 0.9
SENP3-208ENST00000583277 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
SENP3-208ENST00000583277 SLIT1O75093 1534 aa20.65■□□□□ 0.9
SENP3-208ENST00000583277 HSPA5P11021 654 aaKnown RBP20.64■□□□□ 0.9
SENP3-208ENST00000583277 NBPF1Q3BBV0 1214 aa20.63■□□□□ 0.89
SENP3-208ENST00000583277 ARHGAP23Q9P227 1491 aa20.62■□□□□ 0.89
SENP3-208ENST00000583277 C14orf93Q9H972 538 aaKnown RBP20.61■□□□□ 0.89
SENP3-208ENST00000583277 SCAF11Q99590 1463 aaKnown RBP20.61■□□□□ 0.89
SENP3-208ENST00000583277 CFAP70Q5T0N1 1121 aa20.6■□□□□ 0.89
SENP3-208ENST00000583277 NUTM2DQ5VT03 806 aaPredicted RBP20.6■□□□□ 0.89
SENP3-208ENST00000583277 THEMISQ8N1K5 641 aaPredicted RBP20.6■□□□□ 0.89
SENP3-208ENST00000583277 POLR1AO95602 1720 aaPredicted RBP20.6■□□□□ 0.89
SENP3-208ENST00000583277 ADGRB1O14514 1584 aa20.6■□□□□ 0.89
SENP3-208ENST00000583277 EIF3AQ14152 1382 aaKnown RBP20.58■□□□□ 0.89
SENP3-208ENST00000583277 ALKQ9UM73 1620 aa20.57■□□□□ 0.88
SENP3-208ENST00000583277 NRXN3Q9Y4C0 1643 aa20.57■□□□□ 0.88
SENP3-208ENST00000583277 SETD1AO15047 1707 aaKnown RBP20.57■□□□□ 0.88
SENP3-208ENST00000583277 HIRIP3Q9BW71 556 aaPredicted RBP20.56■□□□□ 0.88
SENP3-208ENST00000583277 EID1Q9Y6B2 187 aa20.55■□□□□ 0.88
SENP3-208ENST00000583277 PLEKHG1Q9ULL1 1385 aa20.55■□□□□ 0.88
SENP3-208ENST00000583277 ASXL1Q8IXJ9 1541 aa20.53■□□□□ 0.88
SENP3-208ENST00000583277 ST20-MTHFSA0A0A6YYL1 179 aa20.51■□□□□ 0.87
SENP3-208ENST00000583277 KDM4FA0A1W2PPD8 638 aa20.51■□□□□ 0.87
SENP3-208ENST00000583277 DIP2AQ14689 1571 aa20.51■□□□□ 0.87
SENP3-208ENST00000583277 TXNDC2Q86VQ3 553 aa20.51■□□□□ 0.87
SENP3-208ENST00000583277 ARHGEF28Q8N1W1 1705 aaKnown RBP20.5■□□□□ 0.87
SENP3-208ENST00000583277 LTKP29376 864 aa20.48■□□□□ 0.87
SENP3-208ENST00000583277 YTHDC2Q9H6S0 1430 aaKnown RBP20.46■□□□□ 0.87
SENP3-208ENST00000583277 KNDC1Q76NI1 1749 aa20.46■□□□□ 0.87
SENP3-208ENST00000583277 TMEM132EQ6IEE7 984 aa20.46■□□□□ 0.87
SENP3-208ENST00000583277 CCDC7Q96M83 1385 aa20.46■□□□□ 0.87
SENP3-208ENST00000583277 ADAMTS13Q76LX8 1427 aa20.45■□□□□ 0.86
SENP3-208ENST00000583277 QRICH2Q9H0J4 1663 aa20.45■□□□□ 0.86
SENP3-208ENST00000583277 SLC24A1O60721 1099 aa20.45■□□□□ 0.86
SENP3-208ENST00000583277 DIEXFQ68CQ4 756 aaKnown RBP20.44■□□□□ 0.86
SENP3-208ENST00000583277 ANKLE2Q86XL3 938 aa20.44■□□□□ 0.86
SENP3-208ENST00000583277 BCANQ96GW7 911 aa20.44■□□□□ 0.86
SENP3-208ENST00000583277 SBNO2Q9Y2G9 1366 aa20.44■□□□□ 0.86
SENP3-208ENST00000583277 MED14O60244 1454 aa20.44■□□□□ 0.86
SENP3-208ENST00000583277 DLC1Q96QB1 1528 aa20.44■□□□□ 0.86
SENP3-208ENST00000583277 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
SENP3-208ENST00000583277 LRPPRCP42704 1394 aaKnown RBP20.43■□□□□ 0.86
SENP3-208ENST00000583277 TESK2Q96S53 571 aa20.42■□□□□ 0.86
SENP3-208ENST00000583277 CENPJQ9HC77 1338 aaPredicted RBP20.42■□□□□ 0.86
SENP3-208ENST00000583277 SENP3Q9H4L4 574 aaPredicted RBP20.42■□□□□ 0.86
SENP3-208ENST00000583277 TRAK1Q9UPV9 953 aa20.42■□□□□ 0.86
SENP3-208ENST00000583277 KIF7Q2M1P5 1343 aa20.41■□□□□ 0.86
SENP3-208ENST00000583277 AEBP2Q6ZN18 517 aaPredicted RBP20.41■□□□□ 0.86
SENP3-208ENST00000583277 TMF1P82094 1093 aa20.4■□□□□ 0.86
SENP3-208ENST00000583277 METP08581 1390 aa20.4■□□□□ 0.86
SENP3-208ENST00000583277 TECPR2O15040 1411 aa20.39■□□□□ 0.85
SENP3-208ENST00000583277 ABCC11Q96J66 1382 aa20.39■□□□□ 0.85
SENP3-208ENST00000583277 CPS1P31327 1500 aa20.39■□□□□ 0.85
SENP3-208ENST00000583277 C11orf95C9JLR9 678 aaPredicted RBP20.38■□□□□ 0.85
SENP3-208ENST00000583277 TBX22Q9Y458 520 aa20.38■□□□□ 0.85
SENP3-208ENST00000583277 STK26Q9P289 416 aa20.37■□□□□ 0.85
SENP3-208ENST00000583277 CDCA8Q53HL2 280 aa20.36■□□□□ 0.85
SENP3-208ENST00000583277 PIK3R4Q99570 1358 aa20.36■□□□□ 0.85
SENP3-208ENST00000583277 DISP3Q9P2K9 1392 aa20.36■□□□□ 0.85
SENP3-208ENST00000583277 LMTK3Q96Q04 1460 aa20.36■□□□□ 0.85
SENP3-208ENST00000583277 NPHP4O75161 1426 aaPredicted RBP20.35■□□□□ 0.85
SENP3-208ENST00000583277 DDX10Q13206 875 aaKnown RBP20.34■□□□□ 0.85
SENP3-208ENST00000583277 FAM135BQ49AJ0 1406 aa20.34■□□□□ 0.85
SENP3-208ENST00000583277 SLC26A8Q96RN1 970 aa20.34■□□□□ 0.85
SENP3-208ENST00000583277 XRN1Q8IZH2 1706 aaKnown RBP20.33■□□□□ 0.85
SENP3-208ENST00000583277 SIRT1Q96EB6 747 aa20.32■□□□□ 0.84
SENP3-208ENST00000583277 POGKQ9P215 609 aa20.31■□□□□ 0.84
SENP3-208ENST00000583277 PRAM1Q96QH2 718 aa20.3■□□□□ 0.84
SENP3-208ENST00000583277 PTCH1Q13635 1447 aa20.3■□□□□ 0.84
SENP3-208ENST00000583277 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
SENP3-208ENST00000583277 PTPRUQ92729 1446 aa20.29■□□□□ 0.84
SENP3-208ENST00000583277 POLR3GLQ9BT43 218 aa20.29■□□□□ 0.84
SENP3-208ENST00000583277 TULP4Q9NRJ4 1543 aa20.28■□□□□ 0.84
SENP3-208ENST00000583277 EVC2Q86UK5 1308 aa20.27■□□□□ 0.84
SENP3-208ENST00000583277 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.84
SENP3-208ENST00000583277 MYOM1P52179 1685 aa20.25■□□□□ 0.83
SENP3-208ENST00000583277 PUS7Q96PZ0 661 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms