RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ZNF428Q96B54 188 aa7.47□□□□□ -1.21
RTTN-209ENST00000583043 ATAD2Q6PL18 1390 aa7.47□□□□□ -1.21
RTTN-209ENST00000583043 CEP170Q5SW79 1584 aa7.46□□□□□ -1.21
RTTN-209ENST00000583043 GOLGA6L22H0YM25 854 aa7.46□□□□□ -1.21
RTTN-209ENST00000583043 RUNDC1Q96C34 613 aa7.46□□□□□ -1.21
RTTN-209ENST00000583043 MAGI3Q5TCQ9 1506 aa7.46□□□□□ -1.22
RTTN-209ENST00000583043 MAST1Q9Y2H9 1570 aa7.46□□□□□ -1.22
RTTN-209ENST00000583043 PDE3AQ14432 1141 aa7.46□□□□□ -1.22
RTTN-209ENST00000583043 DCAF8L1A6NGE4 600 aa7.45□□□□□ -1.22
RTTN-209ENST00000583043 ATP10AO60312 1499 aa7.45□□□□□ -1.22
RTTN-209ENST00000583043 ZNF518AQ6AHZ1 1483 aa7.45□□□□□ -1.22
RTTN-209ENST00000583043 FANCAO15360 1455 aa7.45□□□□□ -1.22
RTTN-209ENST00000583043 HSP90AA1P07900 732 aaKnown RBP7.45□□□□□ -1.22
RTTN-209ENST00000583043 PPP2R1AP30153 589 aa7.44□□□□□ -1.22
RTTN-209ENST00000583043 WDR63Q8IWG1 891 aa7.44□□□□□ -1.22
RTTN-209ENST00000583043 PARD3Q8TEW0 1356 aa7.44□□□□□ -1.22
RTTN-209ENST00000583043 SPATA31E1Q6ZUB1 1445 aa7.44□□□□□ -1.22
RTTN-209ENST00000583043 SYCP2Q9BX26 1530 aa7.43□□□□□ -1.22
RTTN-209ENST00000583043 U2AF1L5P0DN76 240 aaPredicted RBP7.43□□□□□ -1.22
RTTN-209ENST00000583043 U2AF1Q01081 240 aaKnown RBP eCLIP7.43□□□□□ -1.22
RTTN-209ENST00000583043 FAM161AQ3B820 660 aa7.43□□□□□ -1.22
RTTN-209ENST00000583043 AFAP1Q8N556 730 aa7.43□□□□□ -1.22
RTTN-209ENST00000583043 EID1Q9Y6B2 187 aa7.43□□□□□ -1.22
RTTN-209ENST00000583043 CD109Q6YHK3 1445 aa7.43□□□□□ -1.22
RTTN-209ENST00000583043 ABCC11Q96J66 1382 aa7.43□□□□□ -1.22
RTTN-209ENST00000583043 KDM5BQ9UGL1 1544 aa7.43□□□□□ -1.22
RTTN-209ENST00000583043 MBD5Q9P267 1494 aa7.43□□□□□ -1.22
RTTN-209ENST00000583043 DENND4BO75064 1496 aaPredicted RBP7.42□□□□□ -1.22
RTTN-209ENST00000583043 KIF16BQ96L93 1317 aa7.42□□□□□ -1.22
RTTN-209ENST00000583043 PIK3C2GO75747 1445 aa7.42□□□□□ -1.22
RTTN-209ENST00000583043 CFAP74Q9C0B2 1584 aa7.42□□□□□ -1.22
RTTN-209ENST00000583043 COL17A1Q9UMD9 1497 aaPredicted RBP7.42□□□□□ -1.22
RTTN-209ENST00000583043 U2SURPO15042 1029 aaKnown RBP7.42□□□□□ -1.22
RTTN-209ENST00000583043 ZKSCAN2Q63HK3 967 aa7.42□□□□□ -1.22
RTTN-209ENST00000583043 PLXNC1O60486 1568 aa7.41□□□□□ -1.22
RTTN-209ENST00000583043 IL27Q8NEV9 243 aa7.41□□□□□ -1.22
RTTN-209ENST00000583043 DDX19BQ9UMR2 479 aa7.41□□□□□ -1.22
RTTN-209ENST00000583043 SBNO2Q9Y2G9 1366 aa7.41□□□□□ -1.22
RTTN-209ENST00000583043 L1TD1Q5T7N2 865 aaKnown RBP7.41□□□□□ -1.22
RTTN-209ENST00000583043 PREX2Q70Z35 1606 aa7.4□□□□□ -1.22
RTTN-209ENST00000583043 HMMRO75330 724 aa7.4□□□□□ -1.22
RTTN-209ENST00000583043 A2MP01023 1474 aa7.4□□□□□ -1.23
RTTN-209ENST00000583043 LRPPRCP42704 1394 aaKnown RBP7.4□□□□□ -1.23
RTTN-209ENST00000583043 NEO1Q92859 1461 aa7.39□□□□□ -1.23
RTTN-209ENST00000583043 PDE4AP27815 886 aa7.39□□□□□ -1.23
RTTN-209ENST00000583043 FRAT1Q92837 279 aaPredicted RBP7.39□□□□□ -1.23
RTTN-209ENST00000583043 DNAJC5BQ9UF47 199 aa7.39□□□□□ -1.23
RTTN-209ENST00000583043 API5Q9BZZ5 524 aaKnown RBP7.39□□□□□ -1.23
RTTN-209ENST00000583043 TRAK1Q9UPV9 953 aa7.39□□□□□ -1.23
RTTN-209ENST00000583043 DIAPH1O60610 1272 aaKnown RBP7.39□□□□□ -1.23
RTTN-209ENST00000583043 ZNF692Q9BU19 519 aaPredicted RBP7.39□□□□□ -1.23
RTTN-209ENST00000583043 ASXL1Q8IXJ9 1541 aa7.39□□□□□ -1.23
RTTN-209ENST00000583043 NBPF1Q3BBV0 1214 aa7.39□□□□□ -1.23
RTTN-209ENST00000583043 C14orf93Q9H972 538 aaKnown RBP7.39□□□□□ -1.23
RTTN-209ENST00000583043 HSCBQ8IWL3 235 aa7.39□□□□□ -1.23
RTTN-209ENST00000583043 GNAI1P63096 354 aa7.38□□□□□ -1.23
RTTN-209ENST00000583043 POGZQ7Z3K3 1410 aa7.38□□□□□ -1.23
RTTN-209ENST00000583043 RTF1Q92541 710 aaKnown RBP7.38□□□□□ -1.23
RTTN-209ENST00000583043 MCCP23508 829 aa7.38□□□□□ -1.23
RTTN-209ENST00000583043 COG3Q96JB2 828 aa7.38□□□□□ -1.23
RTTN-209ENST00000583043 POLR3AO14802 1390 aaPredicted RBP7.37□□□□□ -1.23
RTTN-209ENST00000583043 CFAP70Q5T0N1 1121 aa7.37□□□□□ -1.23
RTTN-209ENST00000583043 SMC4Q9NTJ3 1288 aa7.37□□□□□ -1.23
RTTN-209ENST00000583043 ATP7AQ04656 1500 aa7.37□□□□□ -1.23
RTTN-209ENST00000583043 IL16Q14005 1332 aa7.37□□□□□ -1.23
RTTN-209ENST00000583043 ASXL2Q76L83 1435 aa7.37□□□□□ -1.23
RTTN-209ENST00000583043 MYOM2P54296 1465 aa7.37□□□□□ -1.23
RTTN-209ENST00000583043 C11orf95C9JLR9 678 aaPredicted RBP7.37□□□□□ -1.23
RTTN-209ENST00000583043 APAF1O14727 1248 aa7.37□□□□□ -1.23
RTTN-209ENST00000583043 EXOC6Q8TAG9 804 aa7.37□□□□□ -1.23
RTTN-209ENST00000583043 ADAMTS8Q9UP79 889 aa7.37□□□□□ -1.23
RTTN-209ENST00000583043 MYO5CQ9NQX4 1742 aa7.37□□□□□ -1.23
RTTN-209ENST00000583043 ANKRD36BQ8N2N9 1353 aa7.36□□□□□ -1.23
RTTN-209ENST00000583043 NEUROD2Q15784 382 aa7.36□□□□□ -1.23
RTTN-209ENST00000583043 NCLP19338 710 aaKnown RBP7.36□□□□□ -1.23
RTTN-209ENST00000583043 CCDC27Q2M243 656 aa7.36□□□□□ -1.23
RTTN-209ENST00000583043 RGS3P49796 1198 aa7.36□□□□□ -1.23
RTTN-209ENST00000583043 RNF123Q5XPI4 1314 aa7.36□□□□□ -1.23
RTTN-209ENST00000583043 CLUAP1Q96AJ1 413 aa7.36□□□□□ -1.23
RTTN-209ENST00000583043 PTPRTO14522 1441 aa7.36□□□□□ -1.23
RTTN-209ENST00000583043 UNC13BO14795 1591 aa7.35□□□□□ -1.23
RTTN-209ENST00000583043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.35□□□□□ -1.23
RTTN-209ENST00000583043 SLFN5Q08AF3 891 aa7.35□□□□□ -1.23
RTTN-209ENST00000583043 DZIP1LQ8IYY4 767 aaKnown RBP7.35□□□□□ -1.23
RTTN-209ENST00000583043 CRBNQ96SW2 442 aa7.35□□□□□ -1.23
RTTN-209ENST00000583043 TRPM2O94759 1503 aa7.35□□□□□ -1.23
RTTN-209ENST00000583043 PRDM15P57071 1507 aaPredicted RBP7.35□□□□□ -1.23
RTTN-209ENST00000583043 NKTRP30414 1462 aaKnown RBP7.35□□□□□ -1.23
RTTN-209ENST00000583043 CROCC2H7BZ55 1655 aa7.35□□□□□ -1.23
RTTN-209ENST00000583043 GBP4Q96PP9 640 aa7.35□□□□□ -1.23
RTTN-209ENST00000583043 ABCC1P33527 1531 aa7.35□□□□□ -1.23
RTTN-209ENST00000583043 TRAPPC8Q9Y2L5 1435 aa7.35□□□□□ -1.23
RTTN-209ENST00000583043 LAMC1P11047 1609 aa7.35□□□□□ -1.23
RTTN-209ENST00000583043 TESK2Q96S53 571 aa7.34□□□□□ -1.23
RTTN-209ENST00000583043 FCHSD2O94868 740 aa7.34□□□□□ -1.23
RTTN-209ENST00000583043 STK31Q9BXU1 1019 aa7.34□□□□□ -1.23
RTTN-209ENST00000583043 IQGAP3Q86VI3 1631 aa7.34□□□□□ -1.23
RTTN-209ENST00000583043 SAMD9LQ8IVG5 1584 aa7.34□□□□□ -1.23
RTTN-209ENST00000583043 STK26Q9P289 416 aa7.34□□□□□ -1.23
RTTN-209ENST00000583043 KDM5CP41229 1560 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms