RNA–Protein interactions for RNA: ENST00000582277.5

NDEL1-212, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-212ENST00000582277 THSD4Q6ZMP0 1018 aa7.96□□□□□ -1.14
NDEL1-212ENST00000582277 SAMD7Q7Z3H4 446 aa7.96□□□□□ -1.14
NDEL1-212ENST00000582277 NLRP7Q8WX94 980 aa7.96□□□□□ -1.14
NDEL1-212ENST00000582277 CDK11AQ9UQ88 783 aaPredicted RBP7.96□□□□□ -1.14
NDEL1-212ENST00000582277 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.95□□□□□ -1.14
NDEL1-212ENST00000582277 GPR37O15354 613 aa7.94□□□□□ -1.14
NDEL1-212ENST00000582277 LAPTM4BQ86VI4 370 aa7.94□□□□□ -1.14
NDEL1-212ENST00000582277 TTC13Q8NBP0 860 aa7.94□□□□□ -1.14
NDEL1-212ENST00000582277 HCSTQ9UBK5 93 aa7.94□□□□□ -1.14
NDEL1-212ENST00000582277 GNPATO15228 680 aa7.93□□□□□ -1.14
NDEL1-212ENST00000582277 LRCH3Q96II8 777 aa7.93□□□□□ -1.14
NDEL1-212ENST00000582277 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.93□□□□□ -1.14
NDEL1-212ENST00000582277 ADGRG1Q9Y653 693 aa7.93□□□□□ -1.14
NDEL1-212ENST00000582277 HSP90B1P14625 803 aaKnown RBP7.92□□□□□ -1.14
NDEL1-212ENST00000582277 HIC1Q14526 733 aa7.92□□□□□ -1.14
NDEL1-212ENST00000582277 SWT1Q5T5J6 900 aaKnown RBP7.92□□□□□ -1.14
NDEL1-212ENST00000582277 WBP1LQ9NX94 342 aa7.92□□□□□ -1.14
NDEL1-212ENST00000582277 HPS5Q9UPZ3 1129 aa7.92□□□□□ -1.14
NDEL1-212ENST00000582277 SOWAHBA6NEL2 793 aa7.91□□□□□ -1.14
NDEL1-212ENST00000582277 IGSF3O75054 1194 aa7.91□□□□□ -1.14
NDEL1-212ENST00000582277 NECTIN2Q92692 538 aa7.91□□□□□ -1.14
NDEL1-212ENST00000582277 EYA1Q99502 592 aa7.91□□□□□ -1.14
NDEL1-212ENST00000582277 RBM27Q9P2N5 1060 aaKnown RBP7.91□□□□□ -1.14
NDEL1-212ENST00000582277 HDGFP51858 240 aaKnown RBP7.9□□□□□ -1.14
NDEL1-212ENST00000582277 C1orf115Q9H7X2 142 aa7.9□□□□□ -1.14
NDEL1-212ENST00000582277 RCCD1A6NED2 376 aa7.89□□□□□ -1.15
NDEL1-212ENST00000582277 RBM46Q8TBY0 533 aaKnown RBP7.89□□□□□ -1.15
NDEL1-212ENST00000582277 PPP4CP60510 307 aa7.88□□□□□ -1.15
NDEL1-212ENST00000582277 KRI1Q8N9T8 703 aaKnown RBP7.87□□□□□ -1.15
NDEL1-212ENST00000582277 PHOX2BQ99453 314 aa7.87□□□□□ -1.15
NDEL1-212ENST00000582277 TSR3Q9UJK0 312 aaKnown RBP7.87□□□□□ -1.15
NDEL1-212ENST00000582277 PXYLP1Q8TE99 480 aa7.86□□□□□ -1.15
NDEL1-212ENST00000582277 DNAJB2P25686 324 aa7.85□□□□□ -1.15
NDEL1-212ENST00000582277 METTL3Q86U44 580 aaKnown RBP7.85□□□□□ -1.15
NDEL1-212ENST00000582277 ZC3H15Q8WU90 426 aaKnown RBP7.85□□□□□ -1.15
NDEL1-212ENST00000582277 OATP04181 439 aa7.84□□□□□ -1.15
NDEL1-212ENST00000582277 PLA2G2EQ9NZK7 142 aa7.84□□□□□ -1.15
NDEL1-212ENST00000582277 KCTD17Q8N5Z5 321 aa7.83□□□□□ -1.16
NDEL1-212ENST00000582277 PUS7Q96PZ0 661 aaKnown RBP7.83□□□□□ -1.16
NDEL1-212ENST00000582277 APLP1P51693 650 aa7.82□□□□□ -1.16
NDEL1-212ENST00000582277 CCDC102AQ96A19 550 aa7.82□□□□□ -1.16
NDEL1-212ENST00000582277 TMEM134Q9H6X4 195 aa7.82□□□□□ -1.16
NDEL1-212ENST00000582277 IRF6O14896 467 aa7.81□□□□□ -1.16
NDEL1-212ENST00000582277 MAP2K5Q13163 448 aa7.81□□□□□ -1.16
NDEL1-212ENST00000582277 SLF2Q8IX21 1173 aa7.81□□□□□ -1.16
NDEL1-212ENST00000582277 SLC24A3Q9HC58 644 aa7.81□□□□□ -1.16
NDEL1-212ENST00000582277 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.8□□□□□ -1.16
NDEL1-212ENST00000582277 DDX11L8A8MPP1 907 aa7.8□□□□□ -1.16
NDEL1-212ENST00000582277 RAD21O60216 631 aa7.8□□□□□ -1.16
NDEL1-212ENST00000582277 MDM2Q00987 491 aaPredicted RBP7.8□□□□□ -1.16
NDEL1-212ENST00000582277 APBB1O00213 710 aa7.79□□□□□ -1.16
NDEL1-212ENST00000582277 SLC4A3P48751 1232 aa7.79□□□□□ -1.16
NDEL1-212ENST00000582277 COPS2P61201 443 aa7.79□□□□□ -1.16
NDEL1-212ENST00000582277 RDH13Q8NBN7 331 aa7.79□□□□□ -1.16
NDEL1-212ENST00000582277 ARID3CA6NKF2 412 aa7.78□□□□□ -1.16
NDEL1-212ENST00000582277 ZMYND10O75800 440 aa7.78□□□□□ -1.16
NDEL1-212ENST00000582277 SLC10A3P09131 477 aa7.78□□□□□ -1.16
NDEL1-212ENST00000582277 MINK1Q8N4C8 1332 aaPredicted RBP7.78□□□□□ -1.16
NDEL1-212ENST00000582277 CFHP08603 1231 aa7.77□□□□□ -1.17
NDEL1-212ENST00000582277 RGS22Q8NE09 1264 aa7.77□□□□□ -1.17
NDEL1-212ENST00000582277 CHMP4AQ9BY43 222 aa7.77□□□□□ -1.17
NDEL1-212ENST00000582277 BARGINQ6ZT62 677 aa7.76□□□□□ -1.17
NDEL1-212ENST00000582277 ZNF516Q92618 1163 aa7.76□□□□□ -1.17
NDEL1-212ENST00000582277 MTRQ99707 1265 aa7.75□□□□□ -1.17
NDEL1-212ENST00000582277 PUS10Q3MIT2 529 aaKnown RBP7.74□□□□□ -1.17
NDEL1-212ENST00000582277 BLOC1S3Q6QNY0 202 aa7.73□□□□□ -1.17
NDEL1-212ENST00000582277 NKX2-3Q8TAU0 364 aa7.73□□□□□ -1.17
NDEL1-212ENST00000582277 TRAIPQ9BWF2 469 aa7.73□□□□□ -1.17
NDEL1-212ENST00000582277 KCNC4Q03721 635 aa7.72□□□□□ -1.17
NDEL1-212ENST00000582277 TTLL12Q14166 644 aaPredicted RBP7.72□□□□□ -1.17
NDEL1-212ENST00000582277 NYAP1Q6ZVC0 841 aa7.72□□□□□ -1.17
NDEL1-212ENST00000582277 REPIN1Q9BWE0 567 aaKnown RBP7.72□□□□□ -1.17
NDEL1-212ENST00000582277 PCDHB3Q9Y5E6 796 aa7.72□□□□□ -1.17
NDEL1-212ENST00000582277 KMT5BQ4FZB7 885 aa7.71□□□□□ -1.18
NDEL1-212ENST00000582277 TJAP1Q5JTD0 557 aa7.71□□□□□ -1.18
NDEL1-212ENST00000582277 MTMR7Q9Y216 660 aa7.71□□□□□ -1.18
NDEL1-212ENST00000582277 RSPH4AQ5TD94 716 aa7.7□□□□□ -1.18
NDEL1-212ENST00000582277 TMCO4Q5TGY1 634 aa7.7□□□□□ -1.18
NDEL1-212ENST00000582277 TLL1O43897 1013 aa7.69□□□□□ -1.18
NDEL1-212ENST00000582277 RBM25P49756 843 aaKnown RBP7.68□□□□□ -1.18
NDEL1-212ENST00000582277 FUT2Q10981 343 aa7.68□□□□□ -1.18
NDEL1-212ENST00000582277 SULF1Q8IWU6 871 aa7.68□□□□□ -1.18
NDEL1-212ENST00000582277 IL21Q9HBE4 155 aa7.68□□□□□ -1.18
NDEL1-212ENST00000582277 GPCPD1Q9NPB8 672 aa7.68□□□□□ -1.18
NDEL1-212ENST00000582277 TRIM66O15016 1216 aa7.67□□□□□ -1.18
NDEL1-212ENST00000582277 ACTN4O43707 911 aaKnown RBP7.67□□□□□ -1.18
NDEL1-212ENST00000582277 ITGBL1O95965 494 aaPredicted RBP7.67□□□□□ -1.18
NDEL1-212ENST00000582277 CCDC82Q8N4S0 544 aa7.67□□□□□ -1.18
NDEL1-212ENST00000582277 HLA-CQ95604 372 aa7.67□□□□□ -1.18
NDEL1-212ENST00000582277 AK7Q96M32 723 aa7.67□□□□□ -1.18
NDEL1-212ENST00000582277 CLCN1P35523 988 aa7.66□□□□□ -1.18
NDEL1-212ENST00000582277 GCGRP47871 477 aa7.66□□□□□ -1.18
NDEL1-212ENST00000582277 PRR14Q9BWN1 585 aa7.66□□□□□ -1.18
NDEL1-212ENST00000582277 CD46P15529 392 aa7.65□□□□□ -1.18
NDEL1-212ENST00000582277 SSTR3P32745 418 aaPredicted RBP7.65□□□□□ -1.18
NDEL1-212ENST00000582277 MFAP1P55081 439 aaKnown RBP7.65□□□□□ -1.18
NDEL1-212ENST00000582277 FAM217BQ9NTX9 383 aaPredicted RBP7.65□□□□□ -1.18
NDEL1-212ENST00000582277 ZPR1O75312 459 aa7.64□□□□□ -1.19
NDEL1-212ENST00000582277 GUCA2AQ02747 115 aa7.64□□□□□ -1.19
NDEL1-212ENST00000582277 GIGYF2Q6Y7W6 1299 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms