RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
RNF43-205ENST00000581868 ZNF521Q96K83 1311 aa17.91■□□□□ 0.46
RNF43-205ENST00000581868 CENPQQ7L2Z9 268 aaPredicted RBP17.91■□□□□ 0.46
RNF43-205ENST00000581868 SCAF11Q99590 1463 aaKnown RBP17.91■□□□□ 0.46
RNF43-205ENST00000581868 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.9■□□□□ 0.46
RNF43-205ENST00000581868 SLFN5Q08AF3 891 aa17.89■□□□□ 0.46
RNF43-205ENST00000581868 APAF1O14727 1248 aa17.89■□□□□ 0.45
RNF43-205ENST00000581868 SLC4A3P48751 1232 aa17.89■□□□□ 0.45
RNF43-205ENST00000581868 DDRGK1Q96HY6 314 aa17.89■□□□□ 0.45
RNF43-205ENST00000581868 ASXL1Q8IXJ9 1541 aa17.88■□□□□ 0.45
RNF43-205ENST00000581868 SPINK5Q9NQ38 1064 aaPredicted RBP17.88■□□□□ 0.45
RNF43-205ENST00000581868 IQGAP1P46940 1657 aa17.88■□□□□ 0.45
RNF43-205ENST00000581868 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
RNF43-205ENST00000581868 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
RNF43-205ENST00000581868 ABCC1P33527 1531 aa17.87■□□□□ 0.45
RNF43-205ENST00000581868 RGS3P49796 1198 aa17.86■□□□□ 0.45
RNF43-205ENST00000581868 CFAP70Q5T0N1 1121 aa17.86■□□□□ 0.45
RNF43-205ENST00000581868 SYNMO15061 1565 aa17.86■□□□□ 0.45
RNF43-205ENST00000581868 TRPM2O94759 1503 aa17.85■□□□□ 0.45
RNF43-205ENST00000581868 USP35Q9P2H5 1018 aa17.85■□□□□ 0.45
RNF43-205ENST00000581868 PIK3C2GO75747 1445 aa17.85■□□□□ 0.45
RNF43-205ENST00000581868 SCAPERQ9BY12 1400 aa17.85■□□□□ 0.45
RNF43-205ENST00000581868 KIF3BO15066 747 aa17.85■□□□□ 0.45
RNF43-205ENST00000581868 BCAR3O75815 825 aa17.85■□□□□ 0.45
RNF43-205ENST00000581868 EIF3AQ14152 1382 aaKnown RBP17.84■□□□□ 0.45
RNF43-205ENST00000581868 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
RNF43-205ENST00000581868 DAXXQ9UER7 740 aaPredicted RBP17.84■□□□□ 0.45
RNF43-205ENST00000581868 CLTCL1P53675 1640 aa17.83■□□□□ 0.45
RNF43-205ENST00000581868 ZCCHC11Q5TAX3 1644 aaKnown RBP17.83■□□□□ 0.45
RNF43-205ENST00000581868 PTPRTO14522 1441 aa17.83■□□□□ 0.45
RNF43-205ENST00000581868 FAM161AQ3B820 660 aa17.83■□□□□ 0.44
RNF43-205ENST00000581868 SPHKAPQ2M3C7 1700 aa17.82■□□□□ 0.44
RNF43-205ENST00000581868 C8orf34Q49A92 452 aa17.82■□□□□ 0.44
RNF43-205ENST00000581868 TRMT2AQ8IZ69 625 aaKnown RBP17.82■□□□□ 0.44
RNF43-205ENST00000581868 KANK1Q14678 1352 aa17.81■□□□□ 0.44
RNF43-205ENST00000581868 CARD14Q9BXL6 1004 aa17.81■□□□□ 0.44
RNF43-205ENST00000581868 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
RNF43-205ENST00000581868 ADGRF5Q8IZF2 1346 aa17.81■□□□□ 0.44
RNF43-205ENST00000581868 NPC1L1Q9UHC9 1359 aa17.8■□□□□ 0.44
RNF43-205ENST00000581868 CEP152O94986 1710 aa17.8■□□□□ 0.44
RNF43-205ENST00000581868 RTEL1-TNFRSF6BF6WH68 1400 aa17.79■□□□□ 0.44
RNF43-205ENST00000581868 E9PSI1 815 aa17.79■□□□□ 0.44
RNF43-205ENST00000581868 NKTRP30414 1462 aaKnown RBP17.79■□□□□ 0.44
RNF43-205ENST00000581868 MYOM1P52179 1685 aa17.78■□□□□ 0.44
RNF43-205ENST00000581868 ZFYVE16Q7Z3T8 1539 aa17.78■□□□□ 0.44
RNF43-205ENST00000581868 CLASP1Q7Z460 1538 aa17.77■□□□□ 0.43
RNF43-205ENST00000581868 TNNT2P45379 298 aaPredicted RBP17.76■□□□□ 0.43
RNF43-205ENST00000581868 IL27Q8NEV9 243 aa17.76■□□□□ 0.43
RNF43-205ENST00000581868 NFKBIBQ15653 356 aa17.76■□□□□ 0.43
RNF43-205ENST00000581868 NEUROD2Q15784 382 aa17.76■□□□□ 0.43
RNF43-205ENST00000581868 UGGT1Q9NYU2 1555 aa17.76■□□□□ 0.43
RNF43-205ENST00000581868 KDM5AP29375 1690 aaKnown RBP17.75■□□□□ 0.43
RNF43-205ENST00000581868 CHGAP10645 457 aaKnown RBP17.75■□□□□ 0.43
RNF43-205ENST00000581868 ERVK-7P63135 1459 aa17.75■□□□□ 0.43
RNF43-205ENST00000581868 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
RNF43-205ENST00000581868 IGHDP01880 384 aa17.74■□□□□ 0.43
RNF43-205ENST00000581868 TET3O43151 1660 aa17.74■□□□□ 0.43
RNF43-205ENST00000581868 SLC24A1O60721 1099 aa17.73■□□□□ 0.43
RNF43-205ENST00000581868 UHRF1BP1LA0JNW5 1464 aa17.73■□□□□ 0.43
RNF43-205ENST00000581868 PANK1Q8TE04 598 aa17.72■□□□□ 0.43
RNF43-205ENST00000581868 COG6Q9Y2V7 657 aa17.72■□□□□ 0.43
RNF43-205ENST00000581868 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
RNF43-205ENST00000581868 CENPJQ9HC77 1338 aaPredicted RBP17.72■□□□□ 0.43
RNF43-205ENST00000581868 WWC1Q8IX03 1113 aa17.71■□□□□ 0.43
RNF43-205ENST00000581868 FRAT1Q92837 279 aaPredicted RBP17.71■□□□□ 0.43
RNF43-205ENST00000581868 RTN4Q9NQC3 1192 aaKnown RBP17.71■□□□□ 0.43
RNF43-205ENST00000581868 ATP7AQ04656 1500 aa17.71■□□□□ 0.43
RNF43-205ENST00000581868 DEPDC5O75140 1603 aa17.71■□□□□ 0.42
RNF43-205ENST00000581868 MORC1Q86VD1 984 aa17.7■□□□□ 0.42
RNF43-205ENST00000581868 TRAK1Q9UPV9 953 aa17.7■□□□□ 0.42
RNF43-205ENST00000581868 FANCAO15360 1455 aa17.7■□□□□ 0.42
RNF43-205ENST00000581868 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
RNF43-205ENST00000581868 SLC12A5Q9H2X9 1139 aa17.68■□□□□ 0.42
RNF43-205ENST00000581868 MAP3K4Q9Y6R4 1608 aa17.68■□□□□ 0.42
RNF43-205ENST00000581868 CGNL1Q0VF96 1302 aa17.68■□□□□ 0.42
RNF43-205ENST00000581868 GSE1Q14687 1217 aa17.68■□□□□ 0.42
RNF43-205ENST00000581868 PDE3AQ14432 1141 aa17.68■□□□□ 0.42
RNF43-205ENST00000581868 CLUAP1Q96AJ1 413 aa17.68■□□□□ 0.42
RNF43-205ENST00000581868 KIAA1210Q9ULL0 1709 aa17.67■□□□□ 0.42
RNF43-205ENST00000581868 NGEFQ8N5V2 710 aa17.67■□□□□ 0.42
RNF43-205ENST00000581868 VWDEQ8N2E2 1590 aa17.67■□□□□ 0.42
RNF43-205ENST00000581868 MYOM2P54296 1465 aa17.66■□□□□ 0.42
RNF43-205ENST00000581868 NSD3Q9BZ95 1437 aa17.66■□□□□ 0.42
RNF43-205ENST00000581868 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
RNF43-205ENST00000581868 ADGRL1O94910 1474 aa17.65■□□□□ 0.42
RNF43-205ENST00000581868 ARAP3Q8WWN8 1544 aa17.65■□□□□ 0.42
RNF43-205ENST00000581868 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
RNF43-205ENST00000581868 NOS1P29475 1434 aa17.65■□□□□ 0.42
RNF43-205ENST00000581868 TCP11L2Q8N4U5 519 aa17.65■□□□□ 0.42
RNF43-205ENST00000581868 INO80Q9ULG1 1556 aaPredicted RBP17.64■□□□□ 0.41
RNF43-205ENST00000581868 FRAT2O75474 233 aaPredicted RBP17.64■□□□□ 0.41
RNF43-205ENST00000581868 RUNDC1Q96C34 613 aa17.64■□□□□ 0.41
RNF43-205ENST00000581868 BCL2L13Q9BXK5 485 aa17.64■□□□□ 0.41
RNF43-205ENST00000581868 SEC24BO95487 1268 aa17.63■□□□□ 0.41
RNF43-205ENST00000581868 TNNQ9UQP3 1299 aa17.63■□□□□ 0.41
RNF43-205ENST00000581868 RARSP54136 660 aaKnown RBP17.62■□□□□ 0.41
RNF43-205ENST00000581868 KIF1BO60333 1816 aa17.61■□□□□ 0.41
RNF43-205ENST00000581868 MTHFSP49914 203 aa17.61■□□□□ 0.41
RNF43-205ENST00000581868 MROH1Q8NDA8 1641 aa17.61■□□□□ 0.41
RNF43-205ENST00000581868 BRPF3Q9ULD4 1205 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms