RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 RPRD2Q5VT52 1461 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-220ENST00000581737 TMEM94Q12767 1356 aa19.98■□□□□ 0.79
CSNK1D-220ENST00000581737 TMEM2Q9UHN6 1383 aa19.98■□□□□ 0.79
CSNK1D-220ENST00000581737 TRIM52Q96A61 297 aa19.98■□□□□ 0.79
CSNK1D-220ENST00000581737 FAM135BQ49AJ0 1406 aa19.98■□□□□ 0.79
CSNK1D-220ENST00000581737 CFAP65Q6ZU64 1925 aaKnown RBP19.98■□□□□ 0.79
CSNK1D-220ENST00000581737 HRCP23327 699 aa19.97■□□□□ 0.79
CSNK1D-220ENST00000581737 PIK3C2BO00750 1634 aa19.97■□□□□ 0.79
CSNK1D-220ENST00000581737 EID1Q9Y6B2 187 aa19.95■□□□□ 0.78
CSNK1D-220ENST00000581737 IDI1Q13907 227 aa19.94■□□□□ 0.78
CSNK1D-220ENST00000581737 SLC26A8Q96RN1 970 aa19.94■□□□□ 0.78
CSNK1D-220ENST00000581737 E9PCH4 1651 aa19.94■□□□□ 0.78
CSNK1D-220ENST00000581737 KCNA6P17658 529 aa19.91■□□□□ 0.78
CSNK1D-220ENST00000581737 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
CSNK1D-220ENST00000581737 ROBO1Q9Y6N7 1651 aa19.9■□□□□ 0.78
CSNK1D-220ENST00000581737 ZEB1P37275 1124 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-220ENST00000581737 PROSER2Q86WR7 435 aaPredicted RBP19.89■□□□□ 0.77
CSNK1D-220ENST00000581737 STAG3Q9UJ98 1225 aa19.89■□□□□ 0.77
CSNK1D-220ENST00000581737 NOS1P29475 1434 aa19.87■□□□□ 0.77
CSNK1D-220ENST00000581737 SPHKAPQ2M3C7 1700 aa19.87■□□□□ 0.77
CSNK1D-220ENST00000581737 MPHOSPH9Q99550 1183 aa19.84■□□□□ 0.77
CSNK1D-220ENST00000581737 SETD1AO15047 1707 aaKnown RBP19.82■□□□□ 0.76
CSNK1D-220ENST00000581737 NWD1Q149M9 1564 aa19.82■□□□□ 0.76
CSNK1D-220ENST00000581737 TRPM2O94759 1503 aa19.81■□□□□ 0.76
CSNK1D-220ENST00000581737 SLC52A1Q9NWF4 448 aa19.81■□□□□ 0.76
CSNK1D-220ENST00000581737 SLAIN2Q9P270 581 aa19.81■□□□□ 0.76
CSNK1D-220ENST00000581737 KDM5AP29375 1690 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-220ENST00000581737 ADGRB3O60242 1522 aa19.8■□□□□ 0.76
CSNK1D-220ENST00000581737 NKTRP30414 1462 aaKnown RBP19.79■□□□□ 0.76
CSNK1D-220ENST00000581737 BCANQ96GW7 911 aa19.77■□□□□ 0.76
CSNK1D-220ENST00000581737 MSH6P52701 1360 aa19.77■□□□□ 0.76
CSNK1D-220ENST00000581737 ZFYVE9O95405 1425 aa19.76■□□□□ 0.75
CSNK1D-220ENST00000581737 LRP6O75581 1613 aa19.76■□□□□ 0.75
CSNK1D-220ENST00000581737 JCADQ9P266 1359 aa19.76■□□□□ 0.75
CSNK1D-220ENST00000581737 PHLPP1O60346 1717 aa19.74■□□□□ 0.75
CSNK1D-220ENST00000581737 CLTCL1P53675 1640 aa19.73■□□□□ 0.75
CSNK1D-220ENST00000581737 COL16A1Q07092 1604 aaPredicted RBP19.73■□□□□ 0.75
CSNK1D-220ENST00000581737 KIF1BO60333 1816 aa19.72■□□□□ 0.75
CSNK1D-220ENST00000581737 PLEKHG1Q9ULL1 1385 aa19.71■□□□□ 0.75
CSNK1D-220ENST00000581737 CCDC144AA2RUR9 1427 aa19.71■□□□□ 0.75
CSNK1D-220ENST00000581737 FOXD1Q16676 465 aa19.71■□□□□ 0.75
CSNK1D-220ENST00000581737 RIMS2Q9UQ26 1411 aa19.7■□□□□ 0.74
CSNK1D-220ENST00000581737 NUTM2DQ5VT03 806 aaPredicted RBP19.7■□□□□ 0.74
CSNK1D-220ENST00000581737 TMEM131LA2VDJ0 1609 aa19.69■□□□□ 0.74
CSNK1D-220ENST00000581737 UPF1Q92900 1129 aaKnown RBP eCLIP19.69■□□□□ 0.749e-10■■■■■ 41.2
CSNK1D-220ENST00000581737 MYO5BQ9ULV0 1848 aa19.67■□□□□ 0.74
CSNK1D-220ENST00000581737 CHD2O14647 1828 aaKnown RBP19.67■□□□□ 0.74
CSNK1D-220ENST00000581737 ADAMTS13Q76LX8 1427 aa19.67■□□□□ 0.74
CSNK1D-220ENST00000581737 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
CSNK1D-220ENST00000581737 TBX22Q9Y458 520 aa19.66■□□□□ 0.74
CSNK1D-220ENST00000581737 ANKRD30BQ9BXX2 1392 aa19.66■□□□□ 0.74
CSNK1D-220ENST00000581737 CHGAP10645 457 aaKnown RBP19.65■□□□□ 0.74
CSNK1D-220ENST00000581737 CCER1Q8TC90 406 aaPredicted RBP19.65■□□□□ 0.74
CSNK1D-220ENST00000581737 DHX57Q6P158 1386 aaKnown RBP19.64■□□□□ 0.73
CSNK1D-220ENST00000581737 SRCAPQ6ZRS2 3230 aa19.64■□□□□ 0.73
CSNK1D-220ENST00000581737 SPATA31A6Q5VVP1 1343 aa19.63■□□□□ 0.73
CSNK1D-220ENST00000581737 C14orf37Q86TY3 774 aa19.63■□□□□ 0.73
CSNK1D-220ENST00000581737 MEX3CQ5U5Q3 659 aaKnown RBP19.62■□□□□ 0.73
CSNK1D-220ENST00000581737 NCOA3Q9Y6Q9 1424 aa19.61■□□□□ 0.73
CSNK1D-220ENST00000581737 AHDC1Q5TGY3 1603 aaPredicted RBP19.61■□□□□ 0.73
CSNK1D-220ENST00000581737 PTPRUQ92729 1446 aa19.6■□□□□ 0.73
CSNK1D-220ENST00000581737 HDGFP51858 240 aaKnown RBP19.6■□□□□ 0.73
CSNK1D-220ENST00000581737 ZNF772Q68DY9 489 aaPredicted RBP19.6■□□□□ 0.73
CSNK1D-220ENST00000581737 C19orf44Q9H6X5 657 aa19.6■□□□□ 0.73
CSNK1D-220ENST00000581737 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.59■□□□□ 0.73
CSNK1D-220ENST00000581737 BRINP3Q76B58 766 aa19.59■□□□□ 0.73
CSNK1D-220ENST00000581737 CADPS2Q86UW7 1296 aa19.59■□□□□ 0.73
CSNK1D-220ENST00000581737 DIP2AQ14689 1571 aa19.58■□□□□ 0.73
CSNK1D-220ENST00000581737 NUTM2BA6NNL0 878 aaPredicted RBP19.58■□□□□ 0.72
CSNK1D-220ENST00000581737 NUTM2EB1AL46 878 aaPredicted RBP19.58■□□□□ 0.72
CSNK1D-220ENST00000581737 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
CSNK1D-220ENST00000581737 NUTM2AQ8IVF1 878 aaPredicted RBP19.58■□□□□ 0.72
CSNK1D-220ENST00000581737 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.58■□□□□ 0.72
CSNK1D-220ENST00000581737 ATF3P18847 181 aa19.57■□□□□ 0.72
CSNK1D-220ENST00000581737 SPATA31E1Q6ZUB1 1445 aa19.57■□□□□ 0.72
CSNK1D-220ENST00000581737 AMOTL2Q9Y2J4 779 aa19.56■□□□□ 0.72
CSNK1D-220ENST00000581737 SHPRHQ149N8 1683 aa19.56■□□□□ 0.72
CSNK1D-220ENST00000581737 RPGRIP1LQ68CZ1 1315 aa19.55■□□□□ 0.72
CSNK1D-220ENST00000581737 RXRBP28702 533 aa19.55■□□□□ 0.72
CSNK1D-220ENST00000581737 NEXMIFQ5QGS0 1516 aa19.55■□□□□ 0.72
CSNK1D-220ENST00000581737 PPLO60437 1756 aa19.53■□□□□ 0.72
CSNK1D-220ENST00000581737 PIK3R4Q99570 1358 aa19.53■□□□□ 0.72
CSNK1D-220ENST00000581737 AFF2P51816 1311 aa19.52■□□□□ 0.72
CSNK1D-220ENST00000581737 IFT172Q9UG01 1749 aa19.52■□□□□ 0.72
CSNK1D-220ENST00000581737 DDX17Q92841 729 aaKnown RBP19.52■□□□□ 0.72
CSNK1D-220ENST00000581737 ASXL1Q8IXJ9 1541 aa19.51■□□□□ 0.71
CSNK1D-220ENST00000581737 MST1RQ04912 1400 aa19.5■□□□□ 0.71
CSNK1D-220ENST00000581737 CLSPNQ9HAW4 1339 aa19.5■□□□□ 0.71
CSNK1D-220ENST00000581737 RGL3Q3MIN7 710 aa19.49■□□□□ 0.71
CSNK1D-220ENST00000581737 VGFO15240 615 aaPredicted RBP19.48■□□□□ 0.71
CSNK1D-220ENST00000581737 CDK12Q9NYV4 1490 aaPredicted RBP19.48■□□□□ 0.71
CSNK1D-220ENST00000581737 NRXN3Q9Y4C0 1643 aa19.47■□□□□ 0.71
CSNK1D-220ENST00000581737 METP08581 1390 aa19.46■□□□□ 0.71
CSNK1D-220ENST00000581737 RGS12O14924 1447 aa19.46■□□□□ 0.71
CSNK1D-220ENST00000581737 SETBP1Q9Y6X0 1596 aa19.45■□□□□ 0.7
CSNK1D-220ENST00000581737 STAC3Q96MF2 364 aa19.45■□□□□ 0.7
CSNK1D-220ENST00000581737 C8orf37Q96NL8 207 aa19.45■□□□□ 0.7
CSNK1D-220ENST00000581737 MYOM2P54296 1465 aa19.45■□□□□ 0.7
CSNK1D-220ENST00000581737 XRN1Q8IZH2 1706 aaKnown RBP19.45■□□□□ 0.7
CSNK1D-220ENST00000581737 DCCP43146 1447 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms