RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 PKDCCQ504Y2 493 aa11.24□□□□□ -0.61
TVP23B-209ENST00000581733 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
TVP23B-209ENST00000581733 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
TVP23B-209ENST00000581733 PAXIP1Q6ZW49 1069 aaPredicted RBP11.23□□□□□ -0.61
TVP23B-209ENST00000581733 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
TVP23B-209ENST00000581733 MYT1Q01538 1121 aa11.22□□□□□ -0.61
TVP23B-209ENST00000581733 RSF1Q96T23 1441 aaPredicted RBP11.22□□□□□ -0.61
TVP23B-209ENST00000581733 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
TVP23B-209ENST00000581733 CECR2Q9BXF3 1484 aa11.21□□□□□ -0.61
TVP23B-209ENST00000581733 POTECB2RU33 542 aa11.21□□□□□ -0.61
TVP23B-209ENST00000581733 RNF223E7ERA6 249 aa11.21□□□□□ -0.61
TVP23B-209ENST00000581733 OSBPP22059 807 aa11.21□□□□□ -0.61
TVP23B-209ENST00000581733 PADI6Q6TGC4 694 aa11.21□□□□□ -0.61
TVP23B-209ENST00000581733 EMID1Q96A84 441 aaPredicted RBP11.2□□□□□ -0.62
TVP23B-209ENST00000581733 PCDHB3Q9Y5E6 796 aa11.2□□□□□ -0.62
TVP23B-209ENST00000581733 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
TVP23B-209ENST00000581733 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
TVP23B-209ENST00000581733 E2F4Q16254 413 aa11.18□□□□□ -0.62
TVP23B-209ENST00000581733 BLOC1S3Q6QNY0 202 aa11.18□□□□□ -0.62
TVP23B-209ENST00000581733 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
TVP23B-209ENST00000581733 WIZO95785 1651 aa11.17□□□□□ -0.62
TVP23B-209ENST00000581733 DGAT1O75907 488 aa11.17□□□□□ -0.62
TVP23B-209ENST00000581733 SPRYD7Q5W111 196 aa11.17□□□□□ -0.62
TVP23B-209ENST00000581733 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
TVP23B-209ENST00000581733 TLL1O43897 1013 aa11.16□□□□□ -0.62
TVP23B-209ENST00000581733 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
TVP23B-209ENST00000581733 ZNF598Q86UK7 904 aaKnown RBP11.15□□□□□ -0.62
TVP23B-209ENST00000581733 FAM187AA6NFU0 413 aa11.14□□□□□ -0.63
TVP23B-209ENST00000581733 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
TVP23B-209ENST00000581733 PRR14Q9BWN1 585 aa11.14□□□□□ -0.63
TVP23B-209ENST00000581733 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
TVP23B-209ENST00000581733 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
TVP23B-209ENST00000581733 ZNF697Q5TEC3 545 aa11.12□□□□□ -0.63
TVP23B-209ENST00000581733 S1PR4O95977 384 aa11.11□□□□□ -0.63
TVP23B-209ENST00000581733 PRR20EP86478 221 aa11.11□□□□□ -0.63
TVP23B-209ENST00000581733 PRR20CP86479 221 aa11.11□□□□□ -0.63
TVP23B-209ENST00000581733 PRR20DP86480 221 aa11.11□□□□□ -0.63
TVP23B-209ENST00000581733 PRR20BP86481 221 aa11.11□□□□□ -0.63
TVP23B-209ENST00000581733 PRR20AP86496 221 aa11.11□□□□□ -0.63
TVP23B-209ENST00000581733 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
TVP23B-209ENST00000581733 EYA1Q99502 592 aa11.11□□□□□ -0.63
TVP23B-209ENST00000581733 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
TVP23B-209ENST00000581733 ANKLE1Q8NAG6 615 aa11.1□□□□□ -0.63
TVP23B-209ENST00000581733 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
TVP23B-209ENST00000581733 ST8SIA5O15466 376 aa11.09□□□□□ -0.63
TVP23B-209ENST00000581733 WDR70Q9NW82 654 aa11.09□□□□□ -0.63
TVP23B-209ENST00000581733 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
TVP23B-209ENST00000581733 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
TVP23B-209ENST00000581733 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
TVP23B-209ENST00000581733 GDF9O60383 454 aa11.05□□□□□ -0.64
TVP23B-209ENST00000581733 TSHZ2Q9NRE2 1034 aa11.05□□□□□ -0.64
TVP23B-209ENST00000581733 EIF4G1Q04637 1599 aaKnown RBP11.03□□□□□ -0.64
TVP23B-209ENST00000581733 AAASQ9NRG9 546 aa11.03□□□□□ -0.64
TVP23B-209ENST00000581733 KDM2AQ9Y2K7 1162 aa11.03□□□□□ -0.64
TVP23B-209ENST00000581733 DNAJB2P25686 324 aa11.02□□□□□ -0.65
TVP23B-209ENST00000581733 KMT5BQ4FZB7 885 aa11.01□□□□□ -0.65
TVP23B-209ENST00000581733 ACTN4O43707 911 aaKnown RBP11□□□□□ -0.65
TVP23B-209ENST00000581733 CFHP08603 1231 aa11□□□□□ -0.65
TVP23B-209ENST00000581733 FOXC1Q12948 553 aa11□□□□□ -0.65
TVP23B-209ENST00000581733 PLA2G2CQ5R387 149 aa11□□□□□ -0.65
TVP23B-209ENST00000581733 ADH1BP00325 375 aa10.99□□□□□ -0.65
TVP23B-209ENST00000581733 LCE2AQ5TA79 106 aaPredicted RBP10.99□□□□□ -0.65
TVP23B-209ENST00000581733 SLC6A16Q9GZN6 736 aa10.98□□□□□ -0.65
TVP23B-209ENST00000581733 TMEM134Q9H6X4 195 aa10.97□□□□□ -0.65
TVP23B-209ENST00000581733 HMGXB3Q12766 1538 aa10.97□□□□□ -0.65
TVP23B-209ENST00000581733 ATAD2BQ9ULI0 1458 aa10.96□□□□□ -0.65
TVP23B-209ENST00000581733 RBM46Q8TBY0 533 aaKnown RBP10.96□□□□□ -0.65
TVP23B-209ENST00000581733 BAZ1BQ9UIG0 1483 aaKnown RBP10.95□□□□□ -0.66
TVP23B-209ENST00000581733 NR1I2O75469 434 aa10.95□□□□□ -0.66
TVP23B-209ENST00000581733 DACH1Q9UI36 760 aa10.95□□□□□ -0.66
TVP23B-209ENST00000581733 FAM161AQ3B820 660 aa10.94□□□□□ -0.66
TVP23B-209ENST00000581733 PKD2L1Q9P0L9 805 aa10.94□□□□□ -0.66
TVP23B-209ENST00000581733 RCCD1A6NED2 376 aa10.93□□□□□ -0.66
TVP23B-209ENST00000581733 ADGRG1Q9Y653 693 aa10.92□□□□□ -0.66
TVP23B-209ENST00000581733 WFS1O76024 890 aa10.91□□□□□ -0.66
TVP23B-209ENST00000581733 SLC10A3P09131 477 aa10.91□□□□□ -0.66
TVP23B-209ENST00000581733 MLLT3P42568 568 aaPredicted RBP10.91□□□□□ -0.66
TVP23B-209ENST00000581733 PTGDRQ13258 359 aa10.91□□□□□ -0.66
TVP23B-209ENST00000581733 GMPR2Q9P2T1 348 aaKnown RBP10.91□□□□□ -0.66
TVP23B-209ENST00000581733 PUS10Q3MIT2 529 aaKnown RBP10.89□□□□□ -0.67
TVP23B-209ENST00000581733 SCUBE3Q8IX30 993 aa10.89□□□□□ -0.67
TVP23B-209ENST00000581733 BCANQ96GW7 911 aa10.89□□□□□ -0.67
TVP23B-209ENST00000581733 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
TVP23B-209ENST00000581733 PRDM2Q13029 1718 aa10.88□□□□□ -0.67
TVP23B-209ENST00000581733 CC2D2AQ9P2K1 1620 aa10.87□□□□□ -0.67
TVP23B-209ENST00000581733 CCDC88BA6NC98 1476 aa10.87□□□□□ -0.67
TVP23B-209ENST00000581733 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
TVP23B-209ENST00000581733 AXIN1O15169 862 aa10.87□□□□□ -0.67
TVP23B-209ENST00000581733 LMOD2Q6P5Q4 547 aa10.87□□□□□ -0.67
TVP23B-209ENST00000581733 CRIPAKQ8N1N5 446 aa10.87□□□□□ -0.67
TVP23B-209ENST00000581733 SPSB2Q99619 263 aa10.87□□□□□ -0.67
TVP23B-209ENST00000581733 CYP4X1Q8N118 509 aa10.85□□□□□ -0.67
TVP23B-209ENST00000581733 TOR4AQ9NXH8 423 aa10.84□□□□□ -0.67
TVP23B-209ENST00000581733 NUTM2FA1L443 756 aa10.83□□□□□ -0.68
TVP23B-209ENST00000581733 AVPP01185 164 aa10.83□□□□□ -0.68
TVP23B-209ENST00000581733 STK17AQ9UEE5 414 aa10.83□□□□□ -0.68
TVP23B-209ENST00000581733 RPIAP49247 311 aa10.82□□□□□ -0.68
TVP23B-209ENST00000581733 NFX1Q12986 1120 aaKnown RBP10.82□□□□□ -0.68
TVP23B-209ENST00000581733 FCF1Q9Y324 198 aaKnown RBP10.82□□□□□ -0.68
TVP23B-209ENST00000581733 CD2BP2O95400 341 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms