RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
SUPT4H1-207ENST00000581540 G3V3G9 751 aa11.87□□□□□ -0.51
SUPT4H1-207ENST00000581540 PHF12Q96QT6 1004 aa11.87□□□□□ -0.51
SUPT4H1-207ENST00000581540 CDHR5Q9HBB8 845 aa11.87□□□□□ -0.51
SUPT4H1-207ENST00000581540 NPDC1Q9NQX5 325 aaPredicted RBP11.87□□□□□ -0.51
SUPT4H1-207ENST00000581540 MAP3K7O43318 606 aa11.86□□□□□ -0.51
SUPT4H1-207ENST00000581540 CFAP70Q5T0N1 1121 aa11.86□□□□□ -0.51
SUPT4H1-207ENST00000581540 HDGFL1Q5TGJ6 251 aa11.86□□□□□ -0.51
SUPT4H1-207ENST00000581540 B4GALNT3Q6L9W6 998 aa11.86□□□□□ -0.51
SUPT4H1-207ENST00000581540 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
SUPT4H1-207ENST00000581540 TIE1P35590 1138 aa11.85□□□□□ -0.51
SUPT4H1-207ENST00000581540 WASHC4Q2M389 1173 aa11.85□□□□□ -0.51
SUPT4H1-207ENST00000581540 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
SUPT4H1-207ENST00000581540 EPAS1Q99814 870 aa11.85□□□□□ -0.51
SUPT4H1-207ENST00000581540 VRTNQ9H8Y1 702 aa11.85□□□□□ -0.51
SUPT4H1-207ENST00000581540 LIMD1Q9UGP4 676 aa11.85□□□□□ -0.51
SUPT4H1-207ENST00000581540 CFTRP13569 1480 aa11.83□□□□□ -0.52
SUPT4H1-207ENST00000581540 DPY19L2Q6NUT2 758 aa11.83□□□□□ -0.52
SUPT4H1-207ENST00000581540 NDUFB9Q9Y6M9 179 aa11.83□□□□□ -0.52
SUPT4H1-207ENST00000581540 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
SUPT4H1-207ENST00000581540 TMEM121BQ9BXQ6 578 aaPredicted RBP11.82□□□□□ -0.52
SUPT4H1-207ENST00000581540 PPP1R12CQ9BZL4 782 aa11.82□□□□□ -0.52
SUPT4H1-207ENST00000581540 URB2Q14146 1524 aaKnown RBP11.81□□□□□ -0.52
SUPT4H1-207ENST00000581540 RBM47A0AV96 593 aaKnown RBP11.8□□□□□ -0.52
SUPT4H1-207ENST00000581540 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
SUPT4H1-207ENST00000581540 PHF14O94880 888 aa11.8□□□□□ -0.52
SUPT4H1-207ENST00000581540 FBXO31Q5XUX0 539 aaPredicted RBP11.8□□□□□ -0.52
SUPT4H1-207ENST00000581540 TRPC6Q9Y210 931 aa11.8□□□□□ -0.52
SUPT4H1-207ENST00000581540 BOLA1Q9Y3E2 137 aa11.8□□□□□ -0.52
SUPT4H1-207ENST00000581540 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
SUPT4H1-207ENST00000581540 PXYLP1Q8TE99 480 aa11.79□□□□□ -0.52
SUPT4H1-207ENST00000581540 GNEQ9Y223 722 aaKnown RBP11.79□□□□□ -0.52
SUPT4H1-207ENST00000581540 AP1G2O75843 785 aa11.78□□□□□ -0.52
SUPT4H1-207ENST00000581540 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
SUPT4H1-207ENST00000581540 WIZO95785 1651 aa11.78□□□□□ -0.52
SUPT4H1-207ENST00000581540 SPTLC1O15269 473 aa11.77□□□□□ -0.53
SUPT4H1-207ENST00000581540 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
SUPT4H1-207ENST00000581540 ERCC3P19447 782 aa11.77□□□□□ -0.53
SUPT4H1-207ENST00000581540 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
SUPT4H1-207ENST00000581540 ATG7O95352 703 aa11.76□□□□□ -0.53
SUPT4H1-207ENST00000581540 USP17L8P0C7I0 530 aa11.76□□□□□ -0.53
SUPT4H1-207ENST00000581540 CYB5RLQ6IPT4 315 aa11.76□□□□□ -0.53
SUPT4H1-207ENST00000581540 CERKQ8TCT0 537 aa11.76□□□□□ -0.53
SUPT4H1-207ENST00000581540 ADAMTS19Q8TE59 1207 aa11.76□□□□□ -0.53
SUPT4H1-207ENST00000581540 SPIRE2Q8WWL2 714 aa11.76□□□□□ -0.53
SUPT4H1-207ENST00000581540 NLRP7Q8WX94 980 aa11.76□□□□□ -0.53
SUPT4H1-207ENST00000581540 IFT140Q96RY7 1462 aa11.76□□□□□ -0.53
SUPT4H1-207ENST00000581540 UNCXA6NJT0 531 aa11.75□□□□□ -0.53
SUPT4H1-207ENST00000581540 GJA5P36382 358 aa11.75□□□□□ -0.53
SUPT4H1-207ENST00000581540 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
SUPT4H1-207ENST00000581540 CARNS1A5YM72 827 aa11.74□□□□□ -0.53
SUPT4H1-207ENST00000581540 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
SUPT4H1-207ENST00000581540 RSBN1LQ6PCB5 846 aaPredicted RBP11.74□□□□□ -0.53
SUPT4H1-207ENST00000581540 PDCD7Q8N8D1 485 aaKnown RBP11.74□□□□□ -0.53
SUPT4H1-207ENST00000581540 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
SUPT4H1-207ENST00000581540 IGSF5Q9NSI5 407 aa11.74□□□□□ -0.53
SUPT4H1-207ENST00000581540 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
SUPT4H1-207ENST00000581540 TMEM88BA6NKF7 163 aa11.73□□□□□ -0.53
SUPT4H1-207ENST00000581540 LMOD1P29536 600 aaPredicted RBP11.73□□□□□ -0.53
SUPT4H1-207ENST00000581540 FAM161AQ3B820 660 aa11.73□□□□□ -0.53
SUPT4H1-207ENST00000581540 RBM33Q96EV2 1170 aaKnown RBP11.73□□□□□ -0.53
SUPT4H1-207ENST00000581540 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
SUPT4H1-207ENST00000581540 NUTM1Q86Y26 1132 aa11.72□□□□□ -0.53
SUPT4H1-207ENST00000581540 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
SUPT4H1-207ENST00000581540 LILRB3O75022 631 aa11.71□□□□□ -0.53
SUPT4H1-207ENST00000581540 CSPP1Q1MSJ5 1256 aa11.71□□□□□ -0.53
SUPT4H1-207ENST00000581540 SLAIN1Q8ND83 568 aa11.71□□□□□ -0.53
SUPT4H1-207ENST00000581540 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
SUPT4H1-207ENST00000581540 RSF1Q96T23 1441 aaPredicted RBP11.7□□□□□ -0.54
SUPT4H1-207ENST00000581540 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
SUPT4H1-207ENST00000581540 TYW1BQ6NUM6 668 aa11.69□□□□□ -0.54
SUPT4H1-207ENST00000581540 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
SUPT4H1-207ENST00000581540 PTCD2Q8WV60 388 aaKnown RBP11.69□□□□□ -0.54
SUPT4H1-207ENST00000581540 RBM27Q9P2N5 1060 aaKnown RBP11.69□□□□□ -0.54
SUPT4H1-207ENST00000581540 ARAP1Q96P48 1450 aa11.69□□□□□ -0.54
SUPT4H1-207ENST00000581540 TTBK1Q5TCY1 1321 aaPredicted RBP11.68□□□□□ -0.54
SUPT4H1-207ENST00000581540 NUTM2BA6NNL0 878 aaPredicted RBP11.68□□□□□ -0.54
SUPT4H1-207ENST00000581540 NUTM2EB1AL46 878 aaPredicted RBP11.68□□□□□ -0.54
SUPT4H1-207ENST00000581540 SOX11P35716 441 aa11.68□□□□□ -0.54
SUPT4H1-207ENST00000581540 NUTM2DQ5VT03 806 aaPredicted RBP11.68□□□□□ -0.54
SUPT4H1-207ENST00000581540 NUTM2AQ8IVF1 878 aaPredicted RBP11.68□□□□□ -0.54
SUPT4H1-207ENST00000581540 FAM177A1Q8N128 213 aaPredicted RBP11.68□□□□□ -0.54
SUPT4H1-207ENST00000581540 RBM46Q8TBY0 533 aaKnown RBP11.68□□□□□ -0.54
SUPT4H1-207ENST00000581540 GJD4Q96KN9 370 aaPredicted RBP11.68□□□□□ -0.54
SUPT4H1-207ENST00000581540 QPCTQ16769 361 aa11.67□□□□□ -0.54
SUPT4H1-207ENST00000581540 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
SUPT4H1-207ENST00000581540 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
SUPT4H1-207ENST00000581540 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
SUPT4H1-207ENST00000581540 MRRFQ96E11 262 aaKnown RBP11.66□□□□□ -0.54
SUPT4H1-207ENST00000581540 ALG2Q9H553 416 aa11.66□□□□□ -0.54
SUPT4H1-207ENST00000581540 EIF4G3O43432 1585 aaKnown RBP11.66□□□□□ -0.54
SUPT4H1-207ENST00000581540 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
SUPT4H1-207ENST00000581540 CHD1O14646 1710 aa11.66□□□□□ -0.54
SUPT4H1-207ENST00000581540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.65□□□□□ -0.54
SUPT4H1-207ENST00000581540 VAC14Q08AM6 782 aa11.65□□□□□ -0.54
SUPT4H1-207ENST00000581540 TFIP11Q9UBB9 837 aaKnown RBP11.65□□□□□ -0.54
SUPT4H1-207ENST00000581540 CD46P15529 392 aa11.64□□□□□ -0.55
SUPT4H1-207ENST00000581540 CANXP27824 592 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-207ENST00000581540 PCDHGA10Q9Y5H3 936 aa11.64□□□□□ -0.55
SUPT4H1-207ENST00000581540 TOP2AP11388 1531 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms