RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	NPAT	Q14207	1427 aa		13.73	□□□□□ -0.21
TRIM16-222	ENST00000581224	NOS1	P29475	1434 aa		13.73	□□□□□ -0.21
TRIM16-222	ENST00000581224	EIF3A	Q14152	1382 aa	Known RBP	13.71	□□□□□ -0.21
TRIM16-222	ENST00000581224	IFT172	Q9UG01	1749 aa		13.71	□□□□□ -0.21
TRIM16-222	ENST00000581224	CDCA8	Q53HL2	280 aa		13.71	□□□□□ -0.21
TRIM16-222	ENST00000581224	PREX1	Q8TCU6	1659 aa		13.71	□□□□□ -0.21
TRIM16-222	ENST00000581224	ADGRB3	O60242	1522 aa		13.7	□□□□□ -0.22
TRIM16-222	ENST00000581224	KIF7	Q2M1P5	1343 aa		13.7	□□□□□ -0.22
TRIM16-222	ENST00000581224	PIK3C2B	O00750	1634 aa		13.7	□□□□□ -0.22
TRIM16-222	ENST00000581224	CFAP65	Q6ZU64	1925 aa	Known RBP	13.7	□□□□□ -0.22
TRIM16-222	ENST00000581224	ZMYM3	Q14202	1370 aa		13.7	□□□□□ -0.22
TRIM16-222	ENST00000581224	LMTK3	Q96Q04	1460 aa		13.68	□□□□□ -0.22
TRIM16-222	ENST00000581224	ST20-MTHFS	A0A0A6YYL1	179 aa		13.68	□□□□□ -0.22
TRIM16-222	ENST00000581224	VGF	O15240	615 aa	Predicted RBP	13.68	□□□□□ -0.22
TRIM16-222	ENST00000581224	KTN1	Q86UP2	1357 aa	Known RBP	13.68	□□□□□ -0.22
TRIM16-222	ENST00000581224	TMF1	P82094	1093 aa		13.67	□□□□□ -0.22
TRIM16-222	ENST00000581224	PPL	O60437	1756 aa		13.67	□□□□□ -0.22
TRIM16-222	ENST00000581224	SCAF11	Q99590	1463 aa	Known RBP	13.67	□□□□□ -0.22
TRIM16-222	ENST00000581224	SETD1B	Q9UPS6	1966 aa	Known RBP	13.66	□□□□□ -0.22
TRIM16-222	ENST00000581224	NRXN1	Q9ULB1	1477 aa		13.66	□□□□□ -0.22
TRIM16-222	ENST00000581224	SETBP1	Q9Y6X0	1596 aa		13.66	□□□□□ -0.22
TRIM16-222	ENST00000581224	IQGAP1	P46940	1657 aa		13.66	□□□□□ -0.22
TRIM16-222	ENST00000581224	HSPA2	P54652	639 aa		13.65	□□□□□ -0.22
TRIM16-222	ENST00000581224	ZFYVE9	O95405	1425 aa		13.64	□□□□□ -0.23
TRIM16-222	ENST00000581224	C11orf95	C9JLR9	678 aa	Predicted RBP	13.64	□□□□□ -0.23
TRIM16-222	ENST00000581224	CHGA	P10645	457 aa	Known RBP	13.64	□□□□□ -0.23
TRIM16-222	ENST00000581224	NBPF1	Q3BBV0	1214 aa		13.64	□□□□□ -0.23
TRIM16-222	ENST00000581224	MYO3A	Q8NEV4	1616 aa		13.64	□□□□□ -0.23
TRIM16-222	ENST00000581224	SYNM	O15061	1565 aa		13.62	□□□□□ -0.23
TRIM16-222	ENST00000581224	UGGT1	Q9NYU2	1555 aa		13.62	□□□□□ -0.23
TRIM16-222	ENST00000581224	HDGF	P51858	240 aa	Known RBP	13.61	□□□□□ -0.23
TRIM16-222	ENST00000581224	YTHDC1	Q96MU7	727 aa	Known RBP	13.61	□□□□□ -0.23
TRIM16-222	ENST00000581224	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.6	□□□□□ -0.23
TRIM16-222	ENST00000581224	ERVK-7	P63135	1459 aa		13.6	□□□□□ -0.23
TRIM16-222	ENST00000581224	TNR	Q92752	1358 aa		13.59	□□□□□ -0.23
TRIM16-222	ENST00000581224	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.59	□□□□□ -0.23
TRIM16-222	ENST00000581224	C14orf93	Q9H972	538 aa	Known RBP	13.59	□□□□□ -0.23
TRIM16-222	ENST00000581224	SBNO2	Q9Y2G9	1366 aa		13.58	□□□□□ -0.23
TRIM16-222	ENST00000581224	SPATA31D1	Q6ZQQ2	1576 aa		13.58	□□□□□ -0.23
TRIM16-222	ENST00000581224	PIK3C2G	O75747	1445 aa		13.58	□□□□□ -0.24
TRIM16-222	ENST00000581224	TMEM131L	A2VDJ0	1609 aa		13.58	□□□□□ -0.24
TRIM16-222	ENST00000581224	IDI1	Q13907	227 aa		13.58	□□□□□ -0.24
TRIM16-222	ENST00000581224	POLR3GL	Q9BT43	218 aa		13.58	□□□□□ -0.24
TRIM16-222	ENST00000581224	STAG3	Q9UJ98	1225 aa		13.58	□□□□□ -0.24
TRIM16-222	ENST00000581224	KDM5A	P29375	1690 aa	Known RBP	13.58	□□□□□ -0.24
TRIM16-222	ENST00000581224	ZNF142	P52746	1687 aa	Predicted RBP	13.58	□□□□□ -0.24
TRIM16-222	ENST00000581224	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.58	□□□□□ -0.24
TRIM16-222	ENST00000581224	RALBP1	Q15311	655 aa		13.57	□□□□□ -0.24
TRIM16-222	ENST00000581224	TESK2	Q96S53	571 aa		13.57	□□□□□ -0.24
TRIM16-222	ENST00000581224	NEXMIF	Q5QGS0	1516 aa		13.56	□□□□□ -0.24
TRIM16-222	ENST00000581224	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
TRIM16-222	ENST00000581224	ADGRF5	Q8IZF2	1346 aa		13.56	□□□□□ -0.24
TRIM16-222	ENST00000581224	CFAP70	Q5T0N1	1121 aa		13.55	□□□□□ -0.24
TRIM16-222	ENST00000581224	PUS7	Q96PZ0	661 aa	Known RBP	13.55	□□□□□ -0.24
TRIM16-222	ENST00000581224	A2ML1	A8K2U0	1454 aa		13.53	□□□□□ -0.24
TRIM16-222	ENST00000581224	NLRP1	Q9C000	1473 aa		13.52	□□□□□ -0.25
TRIM16-222	ENST00000581224	STRC	Q7RTU9	1775 aa		13.52	□□□□□ -0.25
TRIM16-222	ENST00000581224	MYO5B	Q9ULV0	1848 aa		13.52	□□□□□ -0.25
TRIM16-222	ENST00000581224	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.51	□□□□□ -0.25
TRIM16-222	ENST00000581224	DISP3	Q9P2K9	1392 aa		13.49	□□□□□ -0.25
TRIM16-222	ENST00000581224	FBXO41	Q8TF61	875 aa		13.49	□□□□□ -0.25
TRIM16-222	ENST00000581224	MRS2	Q9HD23	443 aa		13.49	□□□□□ -0.25
TRIM16-222	ENST00000581224	ADGRB1	O14514	1584 aa		13.49	□□□□□ -0.25
TRIM16-222	ENST00000581224	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.47	□□□□□ -0.25
TRIM16-222	ENST00000581224	NCKAP5L	Q9HCH0	1330 aa		13.47	□□□□□ -0.25
TRIM16-222	ENST00000581224	KNSTRN	Q9Y448	316 aa		13.47	□□□□□ -0.25
TRIM16-222	ENST00000581224	UBR1	Q8IWV7	1749 aa		13.47	□□□□□ -0.25
TRIM16-222	ENST00000581224	QRICH2	Q9H0J4	1663 aa		13.47	□□□□□ -0.25
TRIM16-222	ENST00000581224	BRD4	O60885	1362 aa	Predicted RBP	13.46	□□□□□ -0.25
TRIM16-222	ENST00000581224	TMC1	Q8TDI8	760 aa		13.46	□□□□□ -0.25
TRIM16-222	ENST00000581224	NPC1L1	Q9UHC9	1359 aa		13.45	□□□□□ -0.26
TRIM16-222	ENST00000581224	PER1	O15534	1290 aa	Predicted RBP	13.45	□□□□□ -0.26
TRIM16-222	ENST00000581224	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.45	□□□□□ -0.26
TRIM16-222	ENST00000581224	PANK3	Q9H999	370 aa		13.45	□□□□□ -0.26
TRIM16-222	ENST00000581224	DMRT2	Q9Y5R5	561 aa		13.45	□□□□□ -0.26
TRIM16-222	ENST00000581224	RIMS2	Q9UQ26	1411 aa		13.45	□□□□□ -0.26
TRIM16-222	ENST00000581224	EVC2	Q86UK5	1308 aa		13.44	□□□□□ -0.26
TRIM16-222	ENST00000581224	NLRP13	Q86W25	1043 aa		13.44	□□□□□ -0.26
TRIM16-222	ENST00000581224	NINL	Q9Y2I6	1382 aa		13.44	□□□□□ -0.26
TRIM16-222	ENST00000581224	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.43	□□□□□ -0.26
TRIM16-222	ENST00000581224	TRAK1	Q9UPV9	953 aa		13.43	□□□□□ -0.26
TRIM16-222	ENST00000581224	PARD3	Q8TEW0	1356 aa		13.43	□□□□□ -0.26
TRIM16-222	ENST00000581224	ALK	Q9UM73	1620 aa		13.42	□□□□□ -0.26
TRIM16-222	ENST00000581224	DLC1	Q96QB1	1528 aa		13.41	□□□□□ -0.26
TRIM16-222	ENST00000581224	ANKLE2	Q86XL3	938 aa		13.41	□□□□□ -0.26
TRIM16-222	ENST00000581224	SIRT1	Q96EB6	747 aa		13.41	□□□□□ -0.26
TRIM16-222	ENST00000581224	ASXL1	Q8IXJ9	1541 aa		13.4	□□□□□ -0.26
TRIM16-222	ENST00000581224	INSR	P06213	1382 aa		13.4	□□□□□ -0.26
TRIM16-222	ENST00000581224	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.39	□□□□□ -0.27
TRIM16-222	ENST00000581224	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
TRIM16-222	ENST00000581224	TMEM132E	Q6IEE7	984 aa		13.39	□□□□□ -0.27
TRIM16-222	ENST00000581224	ILDR2	Q71H61	639 aa		13.39	□□□□□ -0.27
TRIM16-222	ENST00000581224	POGK	Q9P215	609 aa		13.39	□□□□□ -0.27
TRIM16-222	ENST00000581224	EID1	Q9Y6B2	187 aa		13.39	□□□□□ -0.27
TRIM16-222	ENST00000581224	MYOM1	P52179	1685 aa		13.39	□□□□□ -0.27
TRIM16-222	ENST00000581224	TMEM2	Q9UHN6	1383 aa		13.38	□□□□□ -0.27
TRIM16-222	ENST00000581224	LRPPRC	P42704	1394 aa	Known RBP	13.37	□□□□□ -0.27
TRIM16-222	ENST00000581224	ABCC11	Q96J66	1382 aa		13.37	□□□□□ -0.27
TRIM16-222	ENST00000581224	FAM9B	Q8IZU0	186 aa		13.37	□□□□□ -0.27
TRIM16-222	ENST00000581224	GTF3C3	Q9Y5Q9	886 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms