RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 CCDC141Q6ZP82 1450 aa11.14□□□□□ -0.63
RIOK3-204ENST00000581220 PRDM15P57071 1507 aaPredicted RBP11.14□□□□□ -0.63
RIOK3-204ENST00000581220 ABCA8O94911 1581 aa11.14□□□□□ -0.63
RIOK3-204ENST00000581220 WDR43Q15061 677 aaKnown RBP eCLIP11.13□□□□□ -0.63
RIOK3-204ENST00000581220 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
RIOK3-204ENST00000581220 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
RIOK3-204ENST00000581220 EIF2AK4Q9P2K8 1649 aaKnown RBP11.13□□□□□ -0.63
RIOK3-204ENST00000581220 GSE1Q14687 1217 aa11.13□□□□□ -0.63
RIOK3-204ENST00000581220 ADAMTS8Q9UP79 889 aa11.13□□□□□ -0.63
RIOK3-204ENST00000581220 KDM2BQ8NHM5 1336 aa11.13□□□□□ -0.63
RIOK3-204ENST00000581220 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
RIOK3-204ENST00000581220 C20orf194Q5TEA3 1177 aa11.12□□□□□ -0.63
RIOK3-204ENST00000581220 A2MP01023 1474 aa11.12□□□□□ -0.63
RIOK3-204ENST00000581220 NFKBIBQ15653 356 aa11.12□□□□□ -0.63
RIOK3-204ENST00000581220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■□□□□ 8.9
RIOK3-204ENST00000581220 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
RIOK3-204ENST00000581220 ABCC2Q92887 1545 aa11.12□□□□□ -0.63
RIOK3-204ENST00000581220 KNSTRNQ9Y448 316 aa11.11□□□□□ -0.63
RIOK3-204ENST00000581220 MED1Q15648 1581 aaPredicted RBP11.11□□□□□ -0.63
RIOK3-204ENST00000581220 MYO5CQ9NQX4 1742 aa11.1□□□□□ -0.63
RIOK3-204ENST00000581220 GOLGA2Q08379 1002 aa11.1□□□□□ -0.63
RIOK3-204ENST00000581220 DUSP27Q5VZP5 1158 aa11.1□□□□□ -0.63
RIOK3-204ENST00000581220 SLC4A3P48751 1232 aa11.09□□□□□ -0.63
RIOK3-204ENST00000581220 PLA2R1Q13018 1463 aa11.09□□□□□ -0.63
RIOK3-204ENST00000581220 ARAP3Q8WWN8 1544 aa11.09□□□□□ -0.63
RIOK3-204ENST00000581220 UNC13BO14795 1591 aa11.09□□□□□ -0.63
RIOK3-204ENST00000581220 SAMD9LQ8IVG5 1584 aa11.09□□□□□ -0.63
RIOK3-204ENST00000581220 PPP2R1AP30153 589 aa11.08□□□□□ -0.64
RIOK3-204ENST00000581220 CDC42BPBQ9Y5S2 1711 aa11.08□□□□□ -0.64
RIOK3-204ENST00000581220 PREX2Q70Z35 1606 aa11.08□□□□□ -0.64
RIOK3-204ENST00000581220 CDCA8Q53HL2 280 aa11.08□□□□□ -0.64
RIOK3-204ENST00000581220 PLEKHH1Q9ULM0 1364 aa11.07□□□□□ -0.64
RIOK3-204ENST00000581220 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
RIOK3-204ENST00000581220 RGS3P49796 1198 aa11.06□□□□□ -0.64
RIOK3-204ENST00000581220 IQGAP3Q86VI3 1631 aa11.06□□□□□ -0.64
RIOK3-204ENST00000581220 MAST1Q9Y2H9 1570 aa11.06□□□□□ -0.64
RIOK3-204ENST00000581220 PREX1Q8TCU6 1659 aa11.05□□□□□ -0.64
RIOK3-204ENST00000581220 FRAT1Q92837 279 aaPredicted RBP11.05□□□□□ -0.64
RIOK3-204ENST00000581220 EIF3AQ14152 1382 aaKnown RBP11.05□□□□□ -0.64
RIOK3-204ENST00000581220 ZNF521Q96K83 1311 aa11.05□□□□□ -0.64
RIOK3-204ENST00000581220 SLFN5Q08AF3 891 aa11.05□□□□□ -0.64
RIOK3-204ENST00000581220 SYCP2Q9BX26 1530 aa11.05□□□□□ -0.64
RIOK3-204ENST00000581220 BRPF3Q9ULD4 1205 aa11.04□□□□□ -0.64
RIOK3-204ENST00000581220 ATP10AO60312 1499 aa11.04□□□□□ -0.64
RIOK3-204ENST00000581220 MAGI2Q86UL8 1455 aa11.04□□□□□ -0.64
RIOK3-204ENST00000581220 WDR7Q9Y4E6 1490 aa11.04□□□□□ -0.64
RIOK3-204ENST00000581220 RNF17Q9BXT8 1623 aaKnown RBP11.04□□□□□ -0.64
RIOK3-204ENST00000581220 YEATS2Q9ULM3 1422 aa11.03□□□□□ -0.64
RIOK3-204ENST00000581220 ARHGAP5Q13017 1502 aa11.03□□□□□ -0.64
RIOK3-204ENST00000581220 PRKCSHP14314 528 aaPredicted RBP11.03□□□□□ -0.64
RIOK3-204ENST00000581220 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
RIOK3-204ENST00000581220 ASXL2Q76L83 1435 aa11.03□□□□□ -0.64
RIOK3-204ENST00000581220 LTBP4Q8N2S1 1624 aa11.03□□□□□ -0.64
RIOK3-204ENST00000581220 PIK3C2GO75747 1445 aa11.02□□□□□ -0.65
RIOK3-204ENST00000581220 PLXNC1O60486 1568 aa11.02□□□□□ -0.65
RIOK3-204ENST00000581220 ASXL1Q8IXJ9 1541 aa11.01□□□□□ -0.65
RIOK3-204ENST00000581220 DUOX2Q9NRD8 1548 aa11.01□□□□□ -0.65
RIOK3-204ENST00000581220 SYNMO15061 1565 aa11.01□□□□□ -0.65
RIOK3-204ENST00000581220 NKTRP30414 1462 aaKnown RBP11.01□□□□□ -0.65
RIOK3-204ENST00000581220 TRMT2AQ8IZ69 625 aaKnown RBP11.01□□□□□ -0.65
RIOK3-204ENST00000581220 MADDQ8WXG6 1647 aa11.01□□□□□ -0.65
RIOK3-204ENST00000581220 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
RIOK3-204ENST00000581220 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
RIOK3-204ENST00000581220 E9PSI1 815 aa11□□□□□ -0.65
RIOK3-204ENST00000581220 IQGAP1P46940 1657 aa11□□□□□ -0.65
RIOK3-204ENST00000581220 APAF1O14727 1248 aa10.99□□□□□ -0.65
RIOK3-204ENST00000581220 STAC3Q96MF2 364 aa10.99□□□□□ -0.65
RIOK3-204ENST00000581220 NPC1L1Q9UHC9 1359 aa10.99□□□□□ -0.65
RIOK3-204ENST00000581220 NGEFQ8N5V2 710 aa10.99□□□□□ -0.65
RIOK3-204ENST00000581220 SCAF11Q99590 1463 aaKnown RBP10.99□□□□□ -0.65
RIOK3-204ENST00000581220 BCAR3O75815 825 aa10.98□□□□□ -0.65
RIOK3-204ENST00000581220 BECN1Q14457 450 aa10.98□□□□□ -0.65
RIOK3-204ENST00000581220 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.98□□□□□ -0.65
RIOK3-204ENST00000581220 CGNL1Q0VF96 1302 aa10.98□□□□□ -0.65
RIOK3-204ENST00000581220 CANXP27824 592 aaKnown RBP10.98□□□□□ -0.65
RIOK3-204ENST00000581220 TTC37Q6PGP7 1564 aa10.98□□□□□ -0.65
RIOK3-204ENST00000581220 MAPK8IP3Q9UPT6 1336 aa10.98□□□□□ -0.65
RIOK3-204ENST00000581220 PDE3AQ14432 1141 aa10.97□□□□□ -0.65
RIOK3-204ENST00000581220 VIRMAQ69YN4 1812 aaKnown RBP10.97□□□□□ -0.65
RIOK3-204ENST00000581220 SLC24A1O60721 1099 aa10.97□□□□□ -0.65
RIOK3-204ENST00000581220 NINLQ9Y2I6 1382 aa10.97□□□□□ -0.65
RIOK3-204ENST00000581220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.97□□□□□ -0.65
RIOK3-204ENST00000581220 SPINK5Q9NQ38 1064 aaPredicted RBP10.96□□□□□ -0.65
RIOK3-204ENST00000581220 SCAPERQ9BY12 1400 aa10.96□□□□□ -0.65
RIOK3-204ENST00000581220 STRCQ7RTU9 1775 aa10.96□□□□□ -0.66
RIOK3-204ENST00000581220 IGHDP01880 384 aa10.96□□□□□ -0.66
RIOK3-204ENST00000581220 CENPJQ9HC77 1338 aaPredicted RBP10.95□□□□□ -0.66
RIOK3-204ENST00000581220 CLUAP1Q96AJ1 413 aa10.95□□□□□ -0.66
RIOK3-204ENST00000581220 SPHKAPQ2M3C7 1700 aa10.94□□□□□ -0.66
RIOK3-204ENST00000581220 KDM5AP29375 1690 aaKnown RBP10.94□□□□□ -0.66
RIOK3-204ENST00000581220 RIMS1Q86UR5 1692 aaKnown RBP10.94□□□□□ -0.66
RIOK3-204ENST00000581220 UPF2Q9HAU5 1272 aaKnown RBP10.94□□□□□ -0.66
RIOK3-204ENST00000581220 MYOM1P52179 1685 aa10.94□□□□□ -0.66
RIOK3-204ENST00000581220 CEP152O94986 1710 aa10.93□□□□□ -0.66
RIOK3-204ENST00000581220 USP19O94966 1318 aa10.93□□□□□ -0.66
RIOK3-204ENST00000581220 FAM43AQ8N2R8 423 aa10.92□□□□□ -0.66
RIOK3-204ENST00000581220 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
RIOK3-204ENST00000581220 COG6Q9Y2V7 657 aa10.92□□□□□ -0.66
RIOK3-204ENST00000581220 POGZQ7Z3K3 1410 aa10.92□□□□□ -0.66
RIOK3-204ENST00000581220 TRPM2O94759 1503 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms