RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 ADGRF5Q8IZF2 1346 aa19.62■□□□□ 0.73
CDK5RAP3-219ENST00000580670 NRXN1Q9ULB1 1477 aa19.6■□□□□ 0.73
CDK5RAP3-219ENST00000580670 ROCK2O75116 1388 aaKnown RBP19.6■□□□□ 0.73
CDK5RAP3-219ENST00000580670 VGFO15240 615 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-219ENST00000580670 NUTM2DQ5VT03 806 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-219ENST00000580670 KDM5AP29375 1690 aaKnown RBP19.59■□□□□ 0.73
CDK5RAP3-219ENST00000580670 PTPRMP28827 1452 aa19.59■□□□□ 0.73
CDK5RAP3-219ENST00000580670 UBR1Q8IWV7 1749 aa19.58■□□□□ 0.73
CDK5RAP3-219ENST00000580670 MYO3AQ8NEV4 1616 aa19.58■□□□□ 0.72
CDK5RAP3-219ENST00000580670 CARD11Q9BXL7 1154 aa19.57■□□□□ 0.72
CDK5RAP3-219ENST00000580670 EIF4G2P78344 907 aaKnown RBP eCLIP19.57■□□□□ 0.72
CDK5RAP3-219ENST00000580670 NBPF1Q3BBV0 1214 aa19.57■□□□□ 0.72
CDK5RAP3-219ENST00000580670 ZFYVE9O95405 1425 aa19.56■□□□□ 0.72
CDK5RAP3-219ENST00000580670 RIMS2Q9UQ26 1411 aa19.56■□□□□ 0.72
CDK5RAP3-219ENST00000580670 PIK3C2GO75747 1445 aa19.55■□□□□ 0.72
CDK5RAP3-219ENST00000580670 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
CDK5RAP3-219ENST00000580670 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
CDK5RAP3-219ENST00000580670 GPRASP1Q5JY77 1395 aa19.54■□□□□ 0.72
CDK5RAP3-219ENST00000580670 KIAA1210Q9ULL0 1709 aa19.54■□□□□ 0.72
CDK5RAP3-219ENST00000580670 CFAP70Q5T0N1 1121 aa19.53■□□□□ 0.72
CDK5RAP3-219ENST00000580670 SETD1BQ9UPS6 1966 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-219ENST00000580670 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDK5RAP3-219ENST00000580670 USP47Q96K76 1375 aa19.52■□□□□ 0.72
CDK5RAP3-219ENST00000580670 TMEM2Q9UHN6 1383 aa19.52■□□□□ 0.72
CDK5RAP3-219ENST00000580670 CEP170BQ9Y4F5 1589 aaPredicted RBP19.51■□□□□ 0.71
CDK5RAP3-219ENST00000580670 LAMC1P11047 1609 aa19.51■□□□□ 0.71
CDK5RAP3-219ENST00000580670 HDGFP51858 240 aaKnown RBP19.51■□□□□ 0.71
CDK5RAP3-219ENST00000580670 C14orf93Q9H972 538 aaKnown RBP19.5■□□□□ 0.71
CDK5RAP3-219ENST00000580670 KDM4FA0A1W2PPD8 638 aa19.49■□□□□ 0.71
CDK5RAP3-219ENST00000580670 THEMISQ8N1K5 641 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP3-219ENST00000580670 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP3-219ENST00000580670 ZNF142P52746 1687 aaPredicted RBP19.48■□□□□ 0.71
CDK5RAP3-219ENST00000580670 SLIT1O75093 1534 aa19.46■□□□□ 0.71
CDK5RAP3-219ENST00000580670 ARHGAP23Q9P227 1491 aa19.45■□□□□ 0.7
CDK5RAP3-219ENST00000580670 EID1Q9Y6B2 187 aa19.45■□□□□ 0.7
CDK5RAP3-219ENST00000580670 SETBP1Q9Y6X0 1596 aa19.45■□□□□ 0.7
CDK5RAP3-219ENST00000580670 TXNDC2Q86VQ3 553 aa19.44■□□□□ 0.7
CDK5RAP3-219ENST00000580670 SCAF11Q99590 1463 aaKnown RBP19.43■□□□□ 0.7
CDK5RAP3-219ENST00000580670 LTKP29376 864 aa19.43■□□□□ 0.7
CDK5RAP3-219ENST00000580670 IQGAP1P46940 1657 aa19.43■□□□□ 0.7
CDK5RAP3-219ENST00000580670 ST20-MTHFSA0A0A6YYL1 179 aa19.42■□□□□ 0.7
CDK5RAP3-219ENST00000580670 ADGRB1O14514 1584 aa19.42■□□□□ 0.7
CDK5RAP3-219ENST00000580670 ALKQ9UM73 1620 aa19.42■□□□□ 0.7
CDK5RAP3-219ENST00000580670 TMEM132EQ6IEE7 984 aa19.42■□□□□ 0.7
CDK5RAP3-219ENST00000580670 PELP1Q8IZL8 1130 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-219ENST00000580670 BCANQ96GW7 911 aa19.4■□□□□ 0.7
CDK5RAP3-219ENST00000580670 PLEKHG1Q9ULL1 1385 aa19.4■□□□□ 0.7
CDK5RAP3-219ENST00000580670 NRXN3Q9Y4C0 1643 aa19.39■□□□□ 0.7
CDK5RAP3-219ENST00000580670 EIF3AQ14152 1382 aaKnown RBP19.38■□□□□ 0.69
CDK5RAP3-219ENST00000580670 ASXL1Q8IXJ9 1541 aa19.38■□□□□ 0.69
CDK5RAP3-219ENST00000580670 TRAK1Q9UPV9 953 aa19.36■□□□□ 0.69
CDK5RAP3-219ENST00000580670 SETD1AO15047 1707 aaKnown RBP19.36■□□□□ 0.69
CDK5RAP3-219ENST00000580670 ANKLE2Q86XL3 938 aa19.35■□□□□ 0.69
CDK5RAP3-219ENST00000580670 C11orf95C9JLR9 678 aaPredicted RBP19.34■□□□□ 0.69
CDK5RAP3-219ENST00000580670 ADAMTS13Q76LX8 1427 aa19.33■□□□□ 0.69
CDK5RAP3-219ENST00000580670 STK26Q9P289 416 aa19.33■□□□□ 0.68
CDK5RAP3-219ENST00000580670 WASHC2AQ641Q2 1341 aa19.33■□□□□ 0.68
CDK5RAP3-219ENST00000580670 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-219ENST00000580670 TESK2Q96S53 571 aa19.32■□□□□ 0.68
CDK5RAP3-219ENST00000580670 METP08581 1390 aa19.32■□□□□ 0.68
CDK5RAP3-219ENST00000580670 DIEXFQ68CQ4 756 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-219ENST00000580670 CCDC7Q96M83 1385 aa19.31■□□□□ 0.68
CDK5RAP3-219ENST00000580670 KIF7Q2M1P5 1343 aa19.31■□□□□ 0.68
CDK5RAP3-219ENST00000580670 SLC26A8Q96RN1 970 aa19.3■□□□□ 0.68
CDK5RAP3-219ENST00000580670 POLR1AO95602 1720 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-219ENST00000580670 MED14O60244 1454 aa19.29■□□□□ 0.68
CDK5RAP3-219ENST00000580670 CENPJQ9HC77 1338 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-219ENST00000580670 LRPPRCP42704 1394 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-219ENST00000580670 ARHGEF28Q8N1W1 1705 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-219ENST00000580670 DDX10Q13206 875 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-219ENST00000580670 DIP2AQ14689 1571 aa19.28■□□□□ 0.68
CDK5RAP3-219ENST00000580670 TMF1P82094 1093 aa19.27■□□□□ 0.68
CDK5RAP3-219ENST00000580670 TBX22Q9Y458 520 aa19.27■□□□□ 0.68
CDK5RAP3-219ENST00000580670 POLR3GLQ9BT43 218 aa19.27■□□□□ 0.67
CDK5RAP3-219ENST00000580670 ABCC11Q96J66 1382 aa19.26■□□□□ 0.67
CDK5RAP3-219ENST00000580670 DISP3Q9P2K9 1392 aa19.26■□□□□ 0.67
CDK5RAP3-219ENST00000580670 QRICH2Q9H0J4 1663 aa19.25■□□□□ 0.67
CDK5RAP3-219ENST00000580670 NCKAP5LQ9HCH0 1330 aa19.25■□□□□ 0.67
CDK5RAP3-219ENST00000580670 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
CDK5RAP3-219ENST00000580670 SBNO2Q9Y2G9 1366 aa19.24■□□□□ 0.67
CDK5RAP3-219ENST00000580670 NPHP4O75161 1426 aaPredicted RBP19.24■□□□□ 0.67
CDK5RAP3-219ENST00000580670 SLC24A1O60721 1099 aa19.24■□□□□ 0.67
CDK5RAP3-219ENST00000580670 HSPA2P54652 639 aa19.24■□□□□ 0.67
CDK5RAP3-219ENST00000580670 POGKQ9P215 609 aa19.24■□□□□ 0.67
CDK5RAP3-219ENST00000580670 LMTK3Q96Q04 1460 aa19.24■□□□□ 0.67
CDK5RAP3-219ENST00000580670 PRAM1Q96QH2 718 aa19.23■□□□□ 0.67
CDK5RAP3-219ENST00000580670 SAFB2Q14151 953 aaKnown RBP eCLIP19.22■□□□□ 0.67
CDK5RAP3-219ENST00000580670 KNDC1Q76NI1 1749 aa19.22■□□□□ 0.67
CDK5RAP3-219ENST00000580670 TECPR2O15040 1411 aa19.21■□□□□ 0.67
CDK5RAP3-219ENST00000580670 PTPRUQ92729 1446 aa19.2■□□□□ 0.66
CDK5RAP3-219ENST00000580670 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-219ENST00000580670 CDCA8Q53HL2 280 aa19.2■□□□□ 0.66
CDK5RAP3-219ENST00000580670 CPS1P31327 1500 aa19.19■□□□□ 0.66
CDK5RAP3-219ENST00000580670 WAPLQ7Z5K2 1190 aa19.19■□□□□ 0.66
CDK5RAP3-219ENST00000580670 SIRT1Q96EB6 747 aa19.19■□□□□ 0.66
CDK5RAP3-219ENST00000580670 AMOTL2Q9Y2J4 779 aa19.19■□□□□ 0.66
CDK5RAP3-219ENST00000580670 PIK3R4Q99570 1358 aa19.18■□□□□ 0.66
CDK5RAP3-219ENST00000580670 FAM135BQ49AJ0 1406 aa19.18■□□□□ 0.66
CDK5RAP3-219ENST00000580670 PLEKHH1Q9ULM0 1364 aa19.18■□□□□ 0.66
CDK5RAP3-219ENST00000580670 ROBO2Q9HCK4 1378 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms