RNA–Protein interactions for RNA: ENST00000580621.5

KRT16P3-203, Transcript of keratin 16 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene KRT16P3, Length 1,939 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P3-203ENST00000580621 PREX1Q8TCU6 1659 aa27.34■■□□□ 1.97
KRT16P3-203ENST00000580621 NRXN1Q9ULB1 1477 aa27.34■■□□□ 1.97
KRT16P3-203ENST00000580621 ADGRF5Q8IZF2 1346 aa27.32■■□□□ 1.96
KRT16P3-203ENST00000580621 PPP6R1Q9UPN7 881 aa27.31■■□□□ 1.96
KRT16P3-203ENST00000580621 TESK2Q96S53 571 aa27.3■■□□□ 1.96
KRT16P3-203ENST00000580621 SCAF11Q99590 1463 aaKnown RBP27.3■■□□□ 1.96
KRT16P3-203ENST00000580621 PRKRIP1Q9H875 184 aaPredicted RBP27.29■■□□□ 1.96
KRT16P3-203ENST00000580621 RPGRIP1LQ68CZ1 1315 aa27.28■■□□□ 1.96
KRT16P3-203ENST00000580621 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
KRT16P3-203ENST00000580621 CFAP70Q5T0N1 1121 aa27.24■■□□□ 1.95
KRT16P3-203ENST00000580621 SLC52A1Q9NWF4 448 aa27.24■■□□□ 1.95
KRT16P3-203ENST00000580621 DISP3Q9P2K9 1392 aa27.24■■□□□ 1.95
KRT16P3-203ENST00000580621 IDI1Q13907 227 aa27.22■■□□□ 1.95
KRT16P3-203ENST00000580621 ERVK-7P63135 1459 aa27.22■■□□□ 1.95
KRT16P3-203ENST00000580621 TMF1P82094 1093 aa27.21■■□□□ 1.95
KRT16P3-203ENST00000580621 PIK3C2GO75747 1445 aa27.21■■□□□ 1.95
KRT16P3-203ENST00000580621 NEXMIFQ5QGS0 1516 aa27.21■■□□□ 1.95
KRT16P3-203ENST00000580621 EIF3AQ14152 1382 aaKnown RBP27.2■■□□□ 1.95
KRT16P3-203ENST00000580621 GTF3C3Q9Y5Q9 886 aa27.2■■□□□ 1.94
KRT16P3-203ENST00000580621 SETBP1Q9Y6X0 1596 aa27.2■■□□□ 1.94
KRT16P3-203ENST00000580621 MYO5BQ9ULV0 1848 aa27.19■■□□□ 1.94
KRT16P3-203ENST00000580621 TMEM131LA2VDJ0 1609 aa27.18■■□□□ 1.94
KRT16P3-203ENST00000580621 MLECQ14165 292 aa27.18■■□□□ 1.94
KRT16P3-203ENST00000580621 FBXO31Q5XUX0 539 aaPredicted RBP27.18■■□□□ 1.94
KRT16P3-203ENST00000580621 C14orf93Q9H972 538 aaKnown RBP27.14■■□□□ 1.94
KRT16P3-203ENST00000580621 SPATA31D1Q6ZQQ2 1576 aa27.13■■□□□ 1.93
KRT16P3-203ENST00000580621 VGFO15240 615 aaPredicted RBP27.12■■□□□ 1.93
KRT16P3-203ENST00000580621 CCDC184Q52MB2 194 aa27.1■■□□□ 1.93
KRT16P3-203ENST00000580621 MYO3AQ8NEV4 1616 aa27.1■■□□□ 1.93
KRT16P3-203ENST00000580621 ZFYVE9O95405 1425 aa27.1■■□□□ 1.93
KRT16P3-203ENST00000580621 ADGRB1O14514 1584 aa27.1■■□□□ 1.93
KRT16P3-203ENST00000580621 NUTM2DQ5VT03 806 aaPredicted RBP27.07■■□□□ 1.92
KRT16P3-203ENST00000580621 CDCA8Q53HL2 280 aa27.06■■□□□ 1.92
KRT16P3-203ENST00000580621 MRS2Q9HD23 443 aa27.06■■□□□ 1.92
KRT16P3-203ENST00000580621 ESF1Q9H501 851 aaKnown RBP27.06■■□□□ 1.92
KRT16P3-203ENST00000580621 SLC24A1O60721 1099 aa27.04■■□□□ 1.92
KRT16P3-203ENST00000580621 TRHP20396 242 aaPredicted RBP27.04■■□□□ 1.92
KRT16P3-203ENST00000580621 CNGB1Q14028 1251 aaPredicted RBP27.04■■□□□ 1.92
KRT16P3-203ENST00000580621 KTN1Q86UP2 1357 aaKnown RBP27.04■■□□□ 1.92
KRT16P3-203ENST00000580621 ZMYM3Q14202 1370 aa27.03■■□□□ 1.92
KRT16P3-203ENST00000580621 KDM5AP29375 1690 aaKnown RBP27.02■■□□□ 1.92
KRT16P3-203ENST00000580621 PER1O15534 1290 aaPredicted RBP27.02■■□□□ 1.92
KRT16P3-203ENST00000580621 PANK3Q9H999 370 aa27■■□□□ 1.91
KRT16P3-203ENST00000580621 SBNO2Q9Y2G9 1366 aa27■■□□□ 1.91
KRT16P3-203ENST00000580621 TMEM132EQ6IEE7 984 aa27■■□□□ 1.91
KRT16P3-203ENST00000580621 RALBP1Q15311 655 aa26.99■■□□□ 1.91
KRT16P3-203ENST00000580621 STAG3Q9UJ98 1225 aa26.99■■□□□ 1.91
KRT16P3-203ENST00000580621 MYOM1P52179 1685 aa26.98■■□□□ 1.91
KRT16P3-203ENST00000580621 CENPJQ9HC77 1338 aaPredicted RBP26.98■■□□□ 1.91
KRT16P3-203ENST00000580621 QRICH2Q9H0J4 1663 aa26.98■■□□□ 1.91
KRT16P3-203ENST00000580621 TRAK1Q9UPV9 953 aa26.98■■□□□ 1.91
KRT16P3-203ENST00000580621 A2ML1A8K2U0 1454 aa26.97■■□□□ 1.91
KRT16P3-203ENST00000580621 ARHGEF28Q8N1W1 1705 aaKnown RBP26.95■■□□□ 1.9
KRT16P3-203ENST00000580621 PARD3Q8TEW0 1356 aa26.94■■□□□ 1.9
KRT16P3-203ENST00000580621 MYBBP1AQ9BQG0 1328 aaKnown RBP26.93■■□□□ 1.9
KRT16P3-203ENST00000580621 ASXL1Q8IXJ9 1541 aa26.93■■□□□ 1.9
KRT16P3-203ENST00000580621 FAM9BQ8IZU0 186 aa26.92■■□□□ 1.9
KRT16P3-203ENST00000580621 HNRNPUQ00839 825 aaKnown RBP eCLIP26.92■■□□□ 1.9
KRT16P3-203ENST00000580621 TNRQ92752 1358 aa26.89■■□□□ 1.9
KRT16P3-203ENST00000580621 RIMS2Q9UQ26 1411 aa26.89■■□□□ 1.9
KRT16P3-203ENST00000580621 ALKQ9UM73 1620 aa26.88■■□□□ 1.89
KRT16P3-203ENST00000580621 BRD4O60885 1362 aaPredicted RBP26.88■■□□□ 1.89
KRT16P3-203ENST00000580621 MYT1Q01538 1121 aa26.86■■□□□ 1.89
KRT16P3-203ENST00000580621 CC2D1BQ5T0F9 858 aaKnown RBP26.84■■□□□ 1.89
KRT16P3-203ENST00000580621 TMC1Q8TDI8 760 aa26.84■■□□□ 1.89
KRT16P3-203ENST00000580621 SENP3Q9H4L4 574 aaPredicted RBP26.84■■□□□ 1.89
KRT16P3-203ENST00000580621 KNSTRNQ9Y448 316 aa26.83■■□□□ 1.89
KRT16P3-203ENST00000580621 DNAJC5Q9H3Z4 198 aa26.82■■□□□ 1.88
KRT16P3-203ENST00000580621 FER1L4A9Z1Z3 1794 aa26.81■■□□□ 1.88
KRT16P3-203ENST00000580621 NLRP13Q86W25 1043 aa26.81■■□□□ 1.88
KRT16P3-203ENST00000580621 YTHDC2Q9H6S0 1430 aaKnown RBP26.81■■□□□ 1.88
KRT16P3-203ENST00000580621 PNISRQ8TF01 805 aaKnown RBP26.8■■□□□ 1.88
KRT16P3-203ENST00000580621 UBR1Q8IWV7 1749 aa26.8■■□□□ 1.88
KRT16P3-203ENST00000580621 STK26Q9P289 416 aa26.79■■□□□ 1.88
KRT16P3-203ENST00000580621 SETD1AO15047 1707 aaKnown RBP26.79■■□□□ 1.88
KRT16P3-203ENST00000580621 C3P01024 1663 aa26.79■■□□□ 1.88
KRT16P3-203ENST00000580621 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.78■■□□□ 1.88
KRT16P3-203ENST00000580621 PTPRMP28827 1452 aa26.78■■□□□ 1.88
KRT16P3-203ENST00000580621 AMER1Q5JTC6 1135 aaPredicted RBP26.78■■□□□ 1.88
KRT16P3-203ENST00000580621 TULP4Q9NRJ4 1543 aa26.77■■□□□ 1.88
KRT16P3-203ENST00000580621 NPC1L1Q9UHC9 1359 aa26.76■■□□□ 1.87
KRT16P3-203ENST00000580621 NRXN3Q9Y4C0 1643 aa26.75■■□□□ 1.87
KRT16P3-203ENST00000580621 EVC2Q86UK5 1308 aa26.75■■□□□ 1.87
KRT16P3-203ENST00000580621 PUS7Q96PZ0 661 aaKnown RBP26.75■■□□□ 1.87
KRT16P3-203ENST00000580621 NLRP1Q9C000 1473 aa26.74■■□□□ 1.87
KRT16P3-203ENST00000580621 LRPPRCP42704 1394 aaKnown RBP26.73■■□□□ 1.87
KRT16P3-203ENST00000580621 CEBPAP49715 358 aaPredicted RBP26.73■■□□□ 1.87
KRT16P3-203ENST00000580621 ZBED9Q6R2W3 1325 aa26.72■■□□□ 1.87
KRT16P3-203ENST00000580621 HDGFP51858 240 aaKnown RBP26.72■■□□□ 1.87
KRT16P3-203ENST00000580621 TMEM2Q9UHN6 1383 aa26.7■■□□□ 1.87
KRT16P3-203ENST00000580621 SAFB2Q14151 953 aaKnown RBP eCLIP26.7■■□□□ 1.86
KRT16P3-203ENST00000580621 CARD14Q9BXL6 1004 aa26.7■■□□□ 1.86
KRT16P3-203ENST00000580621 DLC1Q96QB1 1528 aa26.7■■□□□ 1.86
KRT16P3-203ENST00000580621 PRAM1Q96QH2 718 aa26.69■■□□□ 1.86
KRT16P3-203ENST00000580621 POGKQ9P215 609 aa26.68■■□□□ 1.86
KRT16P3-203ENST00000580621 SLC12A5Q9H2X9 1139 aa26.66■■□□□ 1.86
KRT16P3-203ENST00000580621 PPP2R1AP30153 589 aa26.65■■□□□ 1.86
KRT16P3-203ENST00000580621 CABP2Q9NPB3 220 aa26.63■■□□□ 1.85
KRT16P3-203ENST00000580621 ABCC11Q96J66 1382 aa26.63■■□□□ 1.85
KRT16P3-203ENST00000580621 MINK1Q8N4C8 1332 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms