RNA–Protein interactions for RNA: ENST00000580597.2

RN7SL339P-201, Transcript of RNA, 7SL, cytoplasmic 339, pseudogene, humanhuman

BASIC

Gene RN7SL339P, Length 296 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL339P-201ENST00000580597 HPS5Q9UPZ3 1129 aa12.26□□□□□ -0.45
RN7SL339P-201ENST00000580597 PHOX2BQ99453 314 aa12.25□□□□□ -0.45
RN7SL339P-201ENST00000580597 SLF2Q8IX21 1173 aa12.24□□□□□ -0.45
RN7SL339P-201ENST00000580597 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
RN7SL339P-201ENST00000580597 WBP1LQ9NX94 342 aa12.23□□□□□ -0.45
RN7SL339P-201ENST00000580597 NECTIN2Q92692 538 aa12.21□□□□□ -0.45
RN7SL339P-201ENST00000580597 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
RN7SL339P-201ENST00000580597 KRI1Q8N9T8 703 aaKnown RBP12.2□□□□□ -0.46
RN7SL339P-201ENST00000580597 RNF40O75150 1001 aa12.19□□□□□ -0.46
RN7SL339P-201ENST00000580597 PPP4CP60510 307 aa12.19□□□□□ -0.46
RN7SL339P-201ENST00000580597 NLRP7Q8WX94 980 aa12.18□□□□□ -0.46
RN7SL339P-201ENST00000580597 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
RN7SL339P-201ENST00000580597 SLC10A3P09131 477 aa12.13□□□□□ -0.47
RN7SL339P-201ENST00000580597 APLP1P51693 650 aa12.12□□□□□ -0.47
RN7SL339P-201ENST00000580597 AMHR2Q16671 573 aa12.12□□□□□ -0.47
RN7SL339P-201ENST00000580597 AK7Q96M32 723 aa12.12□□□□□ -0.47
RN7SL339P-201ENST00000580597 TMUB1Q9BVT8 246 aa12.12□□□□□ -0.47
RN7SL339P-201ENST00000580597 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
RN7SL339P-201ENST00000580597 CLCN1P35523 988 aa12.1□□□□□ -0.47
RN7SL339P-201ENST00000580597 SULF1Q8IWU6 871 aa12.1□□□□□ -0.47
RN7SL339P-201ENST00000580597 PRR14Q9BWN1 585 aa12.1□□□□□ -0.47
RN7SL339P-201ENST00000580597 SLC24A3Q9HC58 644 aa12.1□□□□□ -0.47
RN7SL339P-201ENST00000580597 TRIM66O15016 1216 aa12.09□□□□□ -0.47
RN7SL339P-201ENST00000580597 GPCPD1Q9NPB8 672 aa12.09□□□□□ -0.47
RN7SL339P-201ENST00000580597 DDX11L8A8MPP1 907 aa12.08□□□□□ -0.48
RN7SL339P-201ENST00000580597 ITGBL1O95965 494 aaPredicted RBP12.08□□□□□ -0.48
RN7SL339P-201ENST00000580597 CFHP08603 1231 aa12.08□□□□□ -0.48
RN7SL339P-201ENST00000580597 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
RN7SL339P-201ENST00000580597 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
RN7SL339P-201ENST00000580597 RDH13Q8NBN7 331 aa12.05□□□□□ -0.48
RN7SL339P-201ENST00000580597 REPIN1Q9BWE0 567 aaKnown RBP12.05□□□□□ -0.48
RN7SL339P-201ENST00000580597 FAM217BQ9NTX9 383 aaPredicted RBP12.05□□□□□ -0.48
RN7SL339P-201ENST00000580597 PLA2G2EQ9NZK7 142 aa12.05□□□□□ -0.48
RN7SL339P-201ENST00000580597 ACTN4O43707 911 aaKnown RBP12.04□□□□□ -0.48
RN7SL339P-201ENST00000580597 CD46P15529 392 aa12.04□□□□□ -0.48
RN7SL339P-201ENST00000580597 IFFO2Q5TF58 517 aa12.04□□□□□ -0.48
RN7SL339P-201ENST00000580597 TTLL12Q14166 644 aaPredicted RBP12.02□□□□□ -0.49
RN7SL339P-201ENST00000580597 TJAP1Q5JTD0 557 aa12.02□□□□□ -0.49
RN7SL339P-201ENST00000580597 PARP9Q8IXQ6 854 aa12.02□□□□□ -0.49
RN7SL339P-201ENST00000580597 GCGRP47871 477 aa12.01□□□□□ -0.49
RN7SL339P-201ENST00000580597 MTRQ99707 1265 aa12.01□□□□□ -0.49
RN7SL339P-201ENST00000580597 GIGYF2Q6Y7W6 1299 aaKnown RBP12□□□□□ -0.49
RN7SL339P-201ENST00000580597 PCDHB3Q9Y5E6 796 aa12□□□□□ -0.49
RN7SL339P-201ENST00000580597 PDE4DQ08499 809 aa11.99□□□□□ -0.49
RN7SL339P-201ENST00000580597 IL21Q9HBE4 155 aa11.99□□□□□ -0.49
RN7SL339P-201ENST00000580597 KCNC4Q03721 635 aa11.98□□□□□ -0.49
RN7SL339P-201ENST00000580597 TPRNQ4KMQ1 711 aa11.97□□□□□ -0.49
RN7SL339P-201ENST00000580597 SSTR3P32745 418 aaPredicted RBP11.96□□□□□ -0.49
RN7SL339P-201ENST00000580597 BLOC1S3Q6QNY0 202 aa11.96□□□□□ -0.49
RN7SL339P-201ENST00000580597 COPS2P61201 443 aa11.94□□□□□ -0.5
RN7SL339P-201ENST00000580597 FUT2Q10981 343 aa11.94□□□□□ -0.5
RN7SL339P-201ENST00000580597 ATP6V1AP38606 617 aa11.92□□□□□ -0.5
RN7SL339P-201ENST00000580597 ZNF516Q92618 1163 aa11.92□□□□□ -0.5
RN7SL339P-201ENST00000580597 KDM4AO75164 1064 aa11.91□□□□□ -0.5
RN7SL339P-201ENST00000580597 ZPR1O75312 459 aa11.91□□□□□ -0.5
RN7SL339P-201ENST00000580597 MS4A1P11836 297 aa11.91□□□□□ -0.5
RN7SL339P-201ENST00000580597 MORN1Q5T089 497 aa11.91□□□□□ -0.5
RN7SL339P-201ENST00000580597 USP46P62068 366 aa11.9□□□□□ -0.5
RN7SL339P-201ENST00000580597 PUS10Q3MIT2 529 aaKnown RBP11.9□□□□□ -0.5
RN7SL339P-201ENST00000580597 A0A0G2JS52 829 aa11.89□□□□□ -0.51
RN7SL339P-201ENST00000580597 NR1I2O75469 434 aa11.89□□□□□ -0.51
RN7SL339P-201ENST00000580597 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
RN7SL339P-201ENST00000580597 BEGAINQ9BUH8 593 aa11.87□□□□□ -0.51
RN7SL339P-201ENST00000580597 HOXA2O43364 376 aa11.86□□□□□ -0.51
RN7SL339P-201ENST00000580597 SCUBE3Q8IX30 993 aa11.86□□□□□ -0.51
RN7SL339P-201ENST00000580597 TLL1O43897 1013 aa11.85□□□□□ -0.51
RN7SL339P-201ENST00000580597 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
RN7SL339P-201ENST00000580597 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
RN7SL339P-201ENST00000580597 SPIRE2Q8WWL2 714 aa11.84□□□□□ -0.51
RN7SL339P-201ENST00000580597 SLC27A5Q9Y2P5 690 aa11.84□□□□□ -0.51
RN7SL339P-201ENST00000580597 SALL2Q9Y467 1007 aaPredicted RBP11.83□□□□□ -0.52
RN7SL339P-201ENST00000580597 ADH1BP00325 375 aa11.82□□□□□ -0.52
RN7SL339P-201ENST00000580597 THAP11Q96EK4 314 aa11.82□□□□□ -0.52
RN7SL339P-201ENST00000580597 KDM4CQ9H3R0 1056 aa11.82□□□□□ -0.52
RN7SL339P-201ENST00000580597 GPBP1L1Q9HC44 474 aaPredicted RBP11.82□□□□□ -0.52
RN7SL339P-201ENST00000580597 HLA-CQ95604 372 aa11.81□□□□□ -0.52
RN7SL339P-201ENST00000580597 DIXDC1Q155Q3 683 aa11.8□□□□□ -0.52
RN7SL339P-201ENST00000580597 TBC1D2Q9BYX2 928 aa11.79□□□□□ -0.52
RN7SL339P-201ENST00000580597 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
RN7SL339P-201ENST00000580597 PRKCSHP14314 528 aaPredicted RBP11.78□□□□□ -0.52
RN7SL339P-201ENST00000580597 Q3C1V9 767 aa11.78□□□□□ -0.52
RN7SL339P-201ENST00000580597 BRICD5Q6PL45 260 aa11.78□□□□□ -0.52
RN7SL339P-201ENST00000580597 SPSB2Q99619 263 aa11.78□□□□□ -0.52
RN7SL339P-201ENST00000580597 GUCA2AQ02747 115 aa11.77□□□□□ -0.53
RN7SL339P-201ENST00000580597 PPP1R18Q6NYC8 613 aa11.77□□□□□ -0.53
RN7SL339P-201ENST00000580597 RNF19BQ6ZMZ0 732 aa11.77□□□□□ -0.53
RN7SL339P-201ENST00000580597 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
RN7SL339P-201ENST00000580597 GJA5P36382 358 aa11.76□□□□□ -0.53
RN7SL339P-201ENST00000580597 FDX1P10109 184 aa11.75□□□□□ -0.53
RN7SL339P-201ENST00000580597 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.75□□□□□ -0.53
RN7SL339P-201ENST00000580597 RGS20O76081 388 aa11.74□□□□□ -0.53
RN7SL339P-201ENST00000580597 GGCXP38435 758 aa11.74□□□□□ -0.53
RN7SL339P-201ENST00000580597 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
RN7SL339P-201ENST00000580597 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
RN7SL339P-201ENST00000580597 NDUFV2P19404 249 aa11.73□□□□□ -0.53
RN7SL339P-201ENST00000580597 MSS51Q4VC12 460 aa11.73□□□□□ -0.53
RN7SL339P-201ENST00000580597 RSBN1LQ6PCB5 846 aaPredicted RBP11.73□□□□□ -0.53
RN7SL339P-201ENST00000580597 DDRGK1Q96HY6 314 aa11.73□□□□□ -0.53
RN7SL339P-201ENST00000580597 SLC6A16Q9GZN6 736 aa11.73□□□□□ -0.53
RN7SL339P-201ENST00000580597 PCDHGC3Q9UN70 934 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms