RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 SYNMO15061 1565 aa8.77□□□□□ -1.01
PPP4R1-217ENST00000580583 SIGLEC1Q9BZZ2 1709 aa8.77□□□□□ -1.01
PPP4R1-217ENST00000580583 NRXN1Q9ULB1 1477 aa8.77□□□□□ -1.01
PPP4R1-217ENST00000580583 STAC3Q96MF2 364 aa8.76□□□□□ -1.01
PPP4R1-217ENST00000580583 NOS1P29475 1434 aa8.75□□□□□ -1.01
PPP4R1-217ENST00000580583 PPLO60437 1756 aa8.75□□□□□ -1.01
PPP4R1-217ENST00000580583 SCAF11Q99590 1463 aaKnown RBP8.75□□□□□ -1.01
PPP4R1-217ENST00000580583 PREX1Q8TCU6 1659 aa8.75□□□□□ -1.01
PPP4R1-217ENST00000580583 SETBP1Q9Y6X0 1596 aa8.73□□□□□ -1.01
PPP4R1-217ENST00000580583 MYO3AQ8NEV4 1616 aa8.73□□□□□ -1.01
PPP4R1-217ENST00000580583 ST20-MTHFSA0A0A6YYL1 179 aa8.73□□□□□ -1.01
PPP4R1-217ENST00000580583 GGT6Q6P531 493 aa8.73□□□□□ -1.01
PPP4R1-217ENST00000580583 WASHC2CQ9Y4E1 1318 aa8.73□□□□□ -1.01
PPP4R1-217ENST00000580583 EIF3AQ14152 1382 aaKnown RBP8.73□□□□□ -1.01
PPP4R1-217ENST00000580583 NEXMIFQ5QGS0 1516 aa8.71□□□□□ -1.01
PPP4R1-217ENST00000580583 NBPF1Q3BBV0 1214 aa8.71□□□□□ -1.02
PPP4R1-217ENST00000580583 DISP3Q9P2K9 1392 aa8.71□□□□□ -1.02
PPP4R1-217ENST00000580583 PIK3C2GO75747 1445 aa8.71□□□□□ -1.02
PPP4R1-217ENST00000580583 ERVK-7P63135 1459 aa8.7□□□□□ -1.02
PPP4R1-217ENST00000580583 CLTCQ00610 1675 aaKnown RBP8.7□□□□□ -1.02
PPP4R1-217ENST00000580583 POLR3GLQ9BT43 218 aa8.7□□□□□ -1.02
PPP4R1-217ENST00000580583 PRKRIP1Q9H875 184 aaPredicted RBP8.7□□□□□ -1.02
PPP4R1-217ENST00000580583 GTF3C3Q9Y5Q9 886 aa8.7□□□□□ -1.02
PPP4R1-217ENST00000580583 KDM5AP29375 1690 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-217ENST00000580583 KTN1Q86UP2 1357 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-217ENST00000580583 ADGRB1O14514 1584 aa8.69□□□□□ -1.02
PPP4R1-217ENST00000580583 MYOM1P52179 1685 aa8.69□□□□□ -1.02
PPP4R1-217ENST00000580583 TESK2Q96S53 571 aa8.68□□□□□ -1.02
PPP4R1-217ENST00000580583 RPGRIP1LQ68CZ1 1315 aa8.68□□□□□ -1.02
PPP4R1-217ENST00000580583 SPATA31D1Q6ZQQ2 1576 aa8.68□□□□□ -1.02
PPP4R1-217ENST00000580583 TMEM131LA2VDJ0 1609 aa8.68□□□□□ -1.02
PPP4R1-217ENST00000580583 TMF1P82094 1093 aa8.67□□□□□ -1.02
PPP4R1-217ENST00000580583 QRICH2Q9H0J4 1663 aa8.66□□□□□ -1.02
PPP4R1-217ENST00000580583 SBNO2Q9Y2G9 1366 aa8.66□□□□□ -1.02
PPP4R1-217ENST00000580583 ADGRF5Q8IZF2 1346 aa8.66□□□□□ -1.02
PPP4R1-217ENST00000580583 ZFYVE9O95405 1425 aa8.65□□□□□ -1.02
PPP4R1-217ENST00000580583 CHGAP10645 457 aaKnown RBP8.65□□□□□ -1.02
PPP4R1-217ENST00000580583 MRS2Q9HD23 443 aa8.65□□□□□ -1.02
PPP4R1-217ENST00000580583 PARD3Q8TEW0 1356 aa8.64□□□□□ -1.03
PPP4R1-217ENST00000580583 MYO5BQ9ULV0 1848 aa8.64□□□□□ -1.03
PPP4R1-217ENST00000580583 ARHGEF28Q8N1W1 1705 aaKnown RBP8.64□□□□□ -1.03
PPP4R1-217ENST00000580583 CDCA8Q53HL2 280 aa8.64□□□□□ -1.03
PPP4R1-217ENST00000580583 SLC52A1Q9NWF4 448 aa8.64□□□□□ -1.03
PPP4R1-217ENST00000580583 CFAP65Q6ZU64 1925 aaKnown RBP8.64□□□□□ -1.03
PPP4R1-217ENST00000580583 ASXL1Q8IXJ9 1541 aa8.64□□□□□ -1.03
PPP4R1-217ENST00000580583 MAPK8IP2Q13387 824 aaPredicted RBP8.63□□□□□ -1.03
PPP4R1-217ENST00000580583 CFAP70Q5T0N1 1121 aa8.63□□□□□ -1.03
PPP4R1-217ENST00000580583 BRD4O60885 1362 aaPredicted RBP8.62□□□□□ -1.03
PPP4R1-217ENST00000580583 MYBBP1AQ9BQG0 1328 aaKnown RBP8.62□□□□□ -1.03
PPP4R1-217ENST00000580583 HNRNPUQ00839 825 aaKnown RBP eCLIP8.62□□□□□ -1.03
PPP4R1-217ENST00000580583 C1QBPQ07021 282 aaKnown RBP8.62□□□□□ -1.03
PPP4R1-217ENST00000580583 RALBP1Q15311 655 aa8.62□□□□□ -1.03
PPP4R1-217ENST00000580583 SLC24A1O60721 1099 aa8.61□□□□□ -1.03
PPP4R1-217ENST00000580583 CCDC184Q52MB2 194 aa8.61□□□□□ -1.03
PPP4R1-217ENST00000580583 CENPJQ9HC77 1338 aaPredicted RBP8.6□□□□□ -1.03
PPP4R1-217ENST00000580583 A2ML1A8K2U0 1454 aa8.6□□□□□ -1.03
PPP4R1-217ENST00000580583 IDI1Q13907 227 aa8.6□□□□□ -1.03
PPP4R1-217ENST00000580583 C14orf93Q9H972 538 aaKnown RBP8.6□□□□□ -1.03
PPP4R1-217ENST00000580583 VGFO15240 615 aaPredicted RBP8.59□□□□□ -1.03
PPP4R1-217ENST00000580583 TULP4Q9NRJ4 1543 aa8.59□□□□□ -1.03
PPP4R1-217ENST00000580583 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
PPP4R1-217ENST00000580583 ZBED9Q6R2W3 1325 aa8.58□□□□□ -1.04
PPP4R1-217ENST00000580583 SETD1AO15047 1707 aaKnown RBP8.58□□□□□ -1.04
PPP4R1-217ENST00000580583 FAM9BQ8IZU0 186 aa8.58□□□□□ -1.04
PPP4R1-217ENST00000580583 LRPPRCP42704 1394 aaKnown RBP8.58□□□□□ -1.04
PPP4R1-217ENST00000580583 PER1O15534 1290 aaPredicted RBP8.57□□□□□ -1.04
PPP4R1-217ENST00000580583 CNGB1Q14028 1251 aaPredicted RBP8.57□□□□□ -1.04
PPP4R1-217ENST00000580583 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
PPP4R1-217ENST00000580583 NLRP13Q86W25 1043 aa8.57□□□□□ -1.04
PPP4R1-217ENST00000580583 PANK3Q9H999 370 aa8.57□□□□□ -1.04
PPP4R1-217ENST00000580583 NPC1L1Q9UHC9 1359 aa8.57□□□□□ -1.04
PPP4R1-217ENST00000580583 ALKQ9UM73 1620 aa8.57□□□□□ -1.04
PPP4R1-217ENST00000580583 PTPRMP28827 1452 aa8.57□□□□□ -1.04
PPP4R1-217ENST00000580583 RIMS2Q9UQ26 1411 aa8.56□□□□□ -1.04
PPP4R1-217ENST00000580583 DLC1Q96QB1 1528 aa8.56□□□□□ -1.04
PPP4R1-217ENST00000580583 NRXN3Q9Y4C0 1643 aa8.56□□□□□ -1.04
PPP4R1-217ENST00000580583 MLECQ14165 292 aa8.56□□□□□ -1.04
PPP4R1-217ENST00000580583 TMC1Q8TDI8 760 aa8.56□□□□□ -1.04
PPP4R1-217ENST00000580583 ESF1Q9H501 851 aaKnown RBP8.56□□□□□ -1.04
PPP4R1-217ENST00000580583 UBR1Q8IWV7 1749 aa8.56□□□□□ -1.04
PPP4R1-217ENST00000580583 TNRQ92752 1358 aa8.56□□□□□ -1.04
PPP4R1-217ENST00000580583 FER1L4A9Z1Z3 1794 aa8.56□□□□□ -1.04
PPP4R1-217ENST00000580583 INSRP06213 1382 aa8.55□□□□□ -1.04
PPP4R1-217ENST00000580583 YTHDC2Q9H6S0 1430 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 KNDC1Q76NI1 1749 aa8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 NLRP1Q9C000 1473 aa8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 ZMYM3Q14202 1370 aa8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 NEFLP07196 543 aa8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 NUTM2DQ5VT03 806 aaPredicted RBP8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 PNISRQ8TF01 805 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 STAG3Q9UJ98 1225 aa8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 TRAK1Q9UPV9 953 aa8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 KNSTRNQ9Y448 316 aa8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
PPP4R1-217ENST00000580583 NINLQ9Y2I6 1382 aa8.53□□□□□ -1.04
PPP4R1-217ENST00000580583 CC2D1BQ5T0F9 858 aaKnown RBP8.53□□□□□ -1.04
PPP4R1-217ENST00000580583 TMEM132EQ6IEE7 984 aa8.53□□□□□ -1.04
PPP4R1-217ENST00000580583 SUPT16HQ9Y5B9 1047 aaKnown RBP8.53□□□□□ -1.04
PPP4R1-217ENST00000580583 NSD3Q9BZ95 1437 aa8.53□□□□□ -1.04
PPP4R1-217ENST00000580583 C3P01024 1663 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms