RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 COL16A1Q07092 1604 aaPredicted RBP30.37■■■□□ 2.45
LIMD2-209ENST00000580222 ADGRB3O60242 1522 aa30.34■■■□□ 2.45
LIMD2-209ENST00000580222 CHIC2Q9UKJ5 165 aa30.34■■■□□ 2.45
LIMD2-209ENST00000580222 SRCAPQ6ZRS2 3230 aa30.34■■■□□ 2.45
LIMD2-209ENST00000580222 SPATA31A6Q5VVP1 1343 aa30.32■■■□□ 2.44
LIMD2-209ENST00000580222 ZFYVE9O95405 1425 aa30.31■■■□□ 2.44
LIMD2-209ENST00000580222 DAPK1P53355 1430 aa30.31■■■□□ 2.44
LIMD2-209ENST00000580222 MEX3CQ5U5Q3 659 aaKnown RBP30.31■■■□□ 2.44
LIMD2-209ENST00000580222 ZNF772Q68DY9 489 aaPredicted RBP30.31■■■□□ 2.44
LIMD2-209ENST00000580222 SLC52A1Q9NWF4 448 aa30.31■■■□□ 2.44
LIMD2-209ENST00000580222 PLEKHG1Q9ULL1 1385 aa30.28■■■□□ 2.44
LIMD2-209ENST00000580222 CROCC2H7BZ55 1655 aa30.27■■■□□ 2.44
LIMD2-209ENST00000580222 FGD6Q6ZV73 1430 aa30.27■■■□□ 2.44
LIMD2-209ENST00000580222 TBX22Q9Y458 520 aa30.25■■■□□ 2.43
LIMD2-209ENST00000580222 RIMS2Q9UQ26 1411 aa30.24■■■□□ 2.43
LIMD2-209ENST00000580222 RXRBP28702 533 aa30.24■■■□□ 2.43
LIMD2-209ENST00000580222 PTPN23Q9H3S7 1636 aa30.22■■■□□ 2.43
LIMD2-209ENST00000580222 C14orf37Q86TY3 774 aa30.22■■■□□ 2.43
LIMD2-209ENST00000580222 CHD2O14647 1828 aaKnown RBP30.22■■■□□ 2.43
LIMD2-209ENST00000580222 ANKRD30AQ9BXX3 1397 aa30.21■■■□□ 2.43
LIMD2-209ENST00000580222 PPP1R15AO75807 674 aaPredicted RBP30.21■■■□□ 2.43
LIMD2-209ENST00000580222 NUTM2BA6NNL0 878 aaPredicted RBP30.2■■■□□ 2.43
LIMD2-209ENST00000580222 NUTM2EB1AL46 878 aaPredicted RBP30.2■■■□□ 2.43
LIMD2-209ENST00000580222 NUTM2DQ5VT03 806 aaPredicted RBP30.2■■■□□ 2.43
LIMD2-209ENST00000580222 NUTM2AQ8IVF1 878 aaPredicted RBP30.2■■■□□ 2.43
LIMD2-209ENST00000580222 NCOA3Q9Y6Q9 1424 aa30.2■■■□□ 2.42
LIMD2-209ENST00000580222 C19orf44Q9H6X5 657 aa30.19■■■□□ 2.42
LIMD2-209ENST00000580222 AHDC1Q5TGY3 1603 aaPredicted RBP30.18■■■□□ 2.42
LIMD2-209ENST00000580222 ADAMTS13Q76LX8 1427 aa30.17■■■□□ 2.42
LIMD2-209ENST00000580222 BRINP3Q76B58 766 aa30.17■■■□□ 2.42
LIMD2-209ENST00000580222 CADPS2Q86UW7 1296 aa30.17■■■□□ 2.42
LIMD2-209ENST00000580222 ATF3P18847 181 aa30.15■■■□□ 2.42
LIMD2-209ENST00000580222 AFF2P51816 1311 aa30.13■■■□□ 2.41
LIMD2-209ENST00000580222 DIP2AQ14689 1571 aa30.12■■■□□ 2.41
LIMD2-209ENST00000580222 SHPRHQ149N8 1683 aa30.12■■■□□ 2.41
LIMD2-209ENST00000580222 HDGFP51858 240 aaKnown RBP30.12■■■□□ 2.41
LIMD2-209ENST00000580222 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.12■■■□□ 2.41
LIMD2-209ENST00000580222 TMEM131LA2VDJ0 1609 aa30.11■■■□□ 2.41
LIMD2-209ENST00000580222 CHGAP10645 457 aaKnown RBP30.1■■■□□ 2.41
LIMD2-209ENST00000580222 CDK12Q9NYV4 1490 aaPredicted RBP30.1■■■□□ 2.41
LIMD2-209ENST00000580222 RPRD2Q5VT52 1461 aaKnown RBP30.09■■■□□ 2.41
LIMD2-209ENST00000580222 MYO5BQ9ULV0 1848 aa30.09■■■□□ 2.41
LIMD2-209ENST00000580222 PTPRUQ92729 1446 aa30.08■■■□□ 2.41
LIMD2-209ENST00000580222 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.07■■■□□ 2.4
LIMD2-209ENST00000580222 AMOTL2Q9Y2J4 779 aa30.07■■■□□ 2.4
LIMD2-209ENST00000580222 GCC2Q8IWJ2 1684 aa30.05■■■□□ 2.4
LIMD2-209ENST00000580222 ADGRL2O95490 1459 aa30.03■■■□□ 2.4
LIMD2-209ENST00000580222 RGS12O14924 1447 aa30.03■■■□□ 2.4
LIMD2-209ENST00000580222 PIK3R4Q99570 1358 aa30.03■■■□□ 2.4
LIMD2-209ENST00000580222 DDX17Q92841 729 aaKnown RBP30.02■■■□□ 2.4
LIMD2-209ENST00000580222 ANKRD50Q9ULJ7 1429 aa30.02■■■□□ 2.4
LIMD2-209ENST00000580222 QTRT2Q9H974 415 aaKnown RBP30.01■■■□□ 2.39
LIMD2-209ENST00000580222 SETD5Q9C0A6 1442 aa30■■■□□ 2.39
LIMD2-209ENST00000580222 C8orf37Q96NL8 207 aa29.99■■■□□ 2.39
LIMD2-209ENST00000580222 ASXL1Q8IXJ9 1541 aa29.98■■■□□ 2.39
LIMD2-209ENST00000580222 RBM6P78332 1123 aaKnown RBP29.96■■■□□ 2.39
LIMD2-209ENST00000580222 MST1RQ04912 1400 aa29.96■■■□□ 2.39
LIMD2-209ENST00000580222 LRRC59Q96AG4 307 aaKnown RBP29.93■■■□□ 2.38
LIMD2-209ENST00000580222 PNPLA6Q8IY17 1366 aa29.91■■■□□ 2.38
LIMD2-209ENST00000580222 DCCP43146 1447 aa29.91■■■□□ 2.38
LIMD2-209ENST00000580222 APLP2Q06481 763 aa29.91■■■□□ 2.38
LIMD2-209ENST00000580222 FAM50AQ14320 339 aaKnown RBP29.91■■■□□ 2.38
LIMD2-209ENST00000580222 TRPM2O94759 1503 aa29.9■■■□□ 2.38
LIMD2-209ENST00000580222 ADAMTS2O95450 1211 aa29.87■■■□□ 2.37
LIMD2-209ENST00000580222 UNC13BO14795 1591 aa29.86■■■□□ 2.37
LIMD2-209ENST00000580222 METP08581 1390 aa29.86■■■□□ 2.37
LIMD2-209ENST00000580222 NHSL1Q5SYE7 1610 aa29.85■■■□□ 2.37
LIMD2-209ENST00000580222 NGLY1Q96IV0 654 aa29.84■■■□□ 2.37
LIMD2-209ENST00000580222 E9PCH4 1651 aa29.84■■■□□ 2.37
LIMD2-209ENST00000580222 XRN1Q8IZH2 1706 aaKnown RBP29.82■■■□□ 2.36
LIMD2-209ENST00000580222 NRXN3Q9Y4C0 1643 aa29.81■■■□□ 2.36
LIMD2-209ENST00000580222 ATAD2Q6PL18 1390 aa29.77■■■□□ 2.36
LIMD2-209ENST00000580222 ADGRL3Q9HAR2 1447 aa29.76■■■□□ 2.35
LIMD2-209ENST00000580222 EP400Q96L91 3159 aa29.75■■■□□ 2.35
LIMD2-209ENST00000580222 SETBP1Q9Y6X0 1596 aa29.74■■■□□ 2.35
LIMD2-209ENST00000580222 USP21Q9UK80 565 aa29.74■■■□□ 2.35
LIMD2-209ENST00000580222 ORAI2Q96SN7 254 aa29.72■■■□□ 2.35
LIMD2-209ENST00000580222 C1orf167Q5SNV9 1468 aa29.72■■■□□ 2.35
LIMD2-209ENST00000580222 ZRANB1Q9UGI0 708 aa29.71■■■□□ 2.35
LIMD2-209ENST00000580222 NUP155O75694 1391 aa29.71■■■□□ 2.35
LIMD2-209ENST00000580222 FNBP4Q8N3X1 1017 aaPredicted RBP29.7■■■□□ 2.35
LIMD2-209ENST00000580222 TRPC5Q9UL62 973 aaPredicted RBP29.69■■■□□ 2.34
LIMD2-209ENST00000580222 SOS2Q07890 1332 aaPredicted RBP29.69■■■□□ 2.34
LIMD2-209ENST00000580222 IQGAP3Q86VI3 1631 aa29.68■■■□□ 2.34
LIMD2-209ENST00000580222 ZNF326Q5BKZ1 582 aaKnown RBP29.68■■■□□ 2.34
LIMD2-209ENST00000580222 ATRNO75882 1429 aa29.65■■■□□ 2.34
LIMD2-209ENST00000580222 NALCNQ8IZF0 1738 aa29.65■■■□□ 2.34
LIMD2-209ENST00000580222 ROCK1Q13464 1354 aa29.61■■■□□ 2.33
LIMD2-209ENST00000580222 PTCH1Q13635 1447 aa29.6■■■□□ 2.33
LIMD2-209ENST00000580222 ROBO2Q9HCK4 1378 aa29.59■■■□□ 2.33
LIMD2-209ENST00000580222 LAMC1P11047 1609 aa29.59■■■□□ 2.33
LIMD2-209ENST00000580222 BCL9LQ86UU0 1499 aa29.57■■■□□ 2.32
LIMD2-209ENST00000580222 NEXMIFQ5QGS0 1516 aa29.54■■■□□ 2.32
LIMD2-209ENST00000580222 CCDC125Q86Z20 511 aa29.53■■■□□ 2.32
LIMD2-209ENST00000580222 MYOM2P54296 1465 aa29.53■■■□□ 2.32
LIMD2-209ENST00000580222 ITGAEP38570 1179 aa29.51■■■□□ 2.31
LIMD2-209ENST00000580222 FOXD1Q16676 465 aa29.51■■■□□ 2.31
LIMD2-209ENST00000580222 GJD4Q96KN9 370 aaPredicted RBP29.5■■■□□ 2.31
LIMD2-209ENST00000580222 XPCQ01831 940 aaPredicted RBP29.48■■■□□ 2.31
LIMD2-209ENST00000580222 COL22A1Q8NFW1 1626 aaPredicted RBP29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms