RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
TRAPPC8-207ENST00000580104 RIPK4P57078 832 aa16.9■□□□□ 0.3
TRAPPC8-207ENST00000580104 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
TRAPPC8-207ENST00000580104 CFAP70Q5T0N1 1121 aa16.9■□□□□ 0.3
TRAPPC8-207ENST00000580104 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC8-207ENST00000580104 MTHFSP49914 203 aa16.89■□□□□ 0.29
TRAPPC8-207ENST00000580104 TRAK2O60296 914 aa16.89■□□□□ 0.29
TRAPPC8-207ENST00000580104 ST18O60284 1047 aa16.89■□□□□ 0.29
TRAPPC8-207ENST00000580104 MAP3K1Q13233 1512 aa16.89■□□□□ 0.29
TRAPPC8-207ENST00000580104 SUPT6HQ7KZ85 1726 aaKnown RBP16.88■□□□□ 0.29
TRAPPC8-207ENST00000580104 KIAA1211Q6ZU35 1233 aa16.88■□□□□ 0.29
TRAPPC8-207ENST00000580104 TMEM132EQ6IEE7 984 aa16.88■□□□□ 0.29
TRAPPC8-207ENST00000580104 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC8-207ENST00000580104 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
TRAPPC8-207ENST00000580104 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
TRAPPC8-207ENST00000580104 SKOR2Q2VWA4 1001 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC8-207ENST00000580104 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
TRAPPC8-207ENST00000580104 GGNBP2Q9H3C7 697 aa16.86■□□□□ 0.29
TRAPPC8-207ENST00000580104 TSR2Q969E8 191 aaKnown RBP16.85■□□□□ 0.29
TRAPPC8-207ENST00000580104 SYAP1Q96A49 352 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC8-207ENST00000580104 PDE3AQ14432 1141 aa16.85■□□□□ 0.29
TRAPPC8-207ENST00000580104 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
TRAPPC8-207ENST00000580104 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
TRAPPC8-207ENST00000580104 C9orf84Q5VXU9 1444 aa16.84■□□□□ 0.29
TRAPPC8-207ENST00000580104 HMMRO75330 724 aa16.84■□□□□ 0.29
TRAPPC8-207ENST00000580104 RILPL2Q969X0 211 aa16.83■□□□□ 0.29
TRAPPC8-207ENST00000580104 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.28
TRAPPC8-207ENST00000580104 EPRSP07814 1512 aaKnown RBP16.83■□□□□ 0.28
TRAPPC8-207ENST00000580104 MRE11P49959 708 aa16.83■□□□□ 0.28
TRAPPC8-207ENST00000580104 STK31Q9BXU1 1019 aa16.83■□□□□ 0.28
TRAPPC8-207ENST00000580104 AMER1Q5JTC6 1135 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC8-207ENST00000580104 FAM13BQ9NYF5 915 aa16.82■□□□□ 0.28
TRAPPC8-207ENST00000580104 A0A0G2JS52 829 aa16.82■□□□□ 0.28
TRAPPC8-207ENST00000580104 PRKCSHP14314 528 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC8-207ENST00000580104 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
TRAPPC8-207ENST00000580104 MCTP1Q6DN14 999 aa16.82■□□□□ 0.28
TRAPPC8-207ENST00000580104 SLC12A5Q9H2X9 1139 aa16.82■□□□□ 0.28
TRAPPC8-207ENST00000580104 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
TRAPPC8-207ENST00000580104 SLFN5Q08AF3 891 aa16.81■□□□□ 0.28
TRAPPC8-207ENST00000580104 AFAP1Q8N556 730 aa16.81■□□□□ 0.28
TRAPPC8-207ENST00000580104 HMOX1P09601 288 aa16.81■□□□□ 0.28
TRAPPC8-207ENST00000580104 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
TRAPPC8-207ENST00000580104 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
TRAPPC8-207ENST00000580104 CABP2Q9NPB3 220 aa16.8■□□□□ 0.28
TRAPPC8-207ENST00000580104 ABCC5O15440 1437 aa16.8■□□□□ 0.28
TRAPPC8-207ENST00000580104 RPRD2Q5VT52 1461 aaKnown RBP16.8■□□□□ 0.28
TRAPPC8-207ENST00000580104 C1orf115Q9H7X2 142 aa16.79■□□□□ 0.28
TRAPPC8-207ENST00000580104 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
TRAPPC8-207ENST00000580104 ROCK1Q13464 1354 aa16.78■□□□□ 0.28
TRAPPC8-207ENST00000580104 TROQ12816 1431 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC8-207ENST00000580104 LMOD3Q0VAK6 560 aa16.77■□□□□ 0.28
TRAPPC8-207ENST00000580104 KIF16BQ96L93 1317 aa16.77■□□□□ 0.27
TRAPPC8-207ENST00000580104 VGFO15240 615 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC8-207ENST00000580104 NASPP49321 788 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC8-207ENST00000580104 HECW1Q76N89 1606 aa16.76■□□□□ 0.27
TRAPPC8-207ENST00000580104 MCM4P33991 863 aa16.75■□□□□ 0.27
TRAPPC8-207ENST00000580104 DUSP27Q5VZP5 1158 aa16.75■□□□□ 0.27
TRAPPC8-207ENST00000580104 NOB1Q9ULX3 412 aaKnown RBP16.75■□□□□ 0.27
TRAPPC8-207ENST00000580104 GOLGA6L6A8MZA4 724 aa16.75■□□□□ 0.27
TRAPPC8-207ENST00000580104 AAMPQ13685 434 aa16.75■□□□□ 0.27
TRAPPC8-207ENST00000580104 WWC1Q8IX03 1113 aa16.75■□□□□ 0.27
TRAPPC8-207ENST00000580104 RNF214Q8ND24 703 aa16.74■□□□□ 0.27
TRAPPC8-207ENST00000580104 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
TRAPPC8-207ENST00000580104 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
TRAPPC8-207ENST00000580104 LTV1Q96GA3 475 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC8-207ENST00000580104 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
TRAPPC8-207ENST00000580104 CAVIN1Q6NZI2 390 aaKnown RBP16.73■□□□□ 0.27
TRAPPC8-207ENST00000580104 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
TRAPPC8-207ENST00000580104 REC8O95072 547 aa16.72■□□□□ 0.27
TRAPPC8-207ENST00000580104 R3HCC1Q9Y3T6 440 aaKnown RBP16.72■□□□□ 0.27
TRAPPC8-207ENST00000580104 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
TRAPPC8-207ENST00000580104 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.27
TRAPPC8-207ENST00000580104 NRDCO43847 1150 aa16.71■□□□□ 0.27
TRAPPC8-207ENST00000580104 PHF14O94880 888 aa16.71■□□□□ 0.27
TRAPPC8-207ENST00000580104 API5Q9BZZ5 524 aaKnown RBP16.71■□□□□ 0.27
TRAPPC8-207ENST00000580104 CHMP3Q9Y3E7 222 aa16.71■□□□□ 0.27
TRAPPC8-207ENST00000580104 IGHDP01880 384 aa16.71■□□□□ 0.26
TRAPPC8-207ENST00000580104 CDK11BP21127 795 aaKnown RBP16.7■□□□□ 0.26
TRAPPC8-207ENST00000580104 GRPEL1Q9HAV7 217 aa16.7■□□□□ 0.26
TRAPPC8-207ENST00000580104 NUCB2P80303 420 aa16.7■□□□□ 0.26
TRAPPC8-207ENST00000580104 CDC45O75419 566 aa16.69■□□□□ 0.26
TRAPPC8-207ENST00000580104 COG3Q96JB2 828 aa16.69■□□□□ 0.26
TRAPPC8-207ENST00000580104 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
TRAPPC8-207ENST00000580104 INTS3Q68E01 1043 aaKnown RBP16.69■□□□□ 0.26
TRAPPC8-207ENST00000580104 STAC3Q96MF2 364 aa16.69■□□□□ 0.26
TRAPPC8-207ENST00000580104 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
TRAPPC8-207ENST00000580104 ARHGAP5Q13017 1502 aa16.68■□□□□ 0.26
TRAPPC8-207ENST00000580104 AMPHP49418 695 aa16.68■□□□□ 0.26
TRAPPC8-207ENST00000580104 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
TRAPPC8-207ENST00000580104 ATF7IPQ6VMQ6 1270 aa16.67■□□□□ 0.26
TRAPPC8-207ENST00000580104 PRPF40AO75400 957 aaKnown RBP16.67■□□□□ 0.26
TRAPPC8-207ENST00000580104 HDGFP51858 240 aaKnown RBP16.67■□□□□ 0.26
TRAPPC8-207ENST00000580104 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
TRAPPC8-207ENST00000580104 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
TRAPPC8-207ENST00000580104 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC8-207ENST00000580104 GNAI1P63096 354 aa16.66■□□□□ 0.26
TRAPPC8-207ENST00000580104 DISP3Q9P2K9 1392 aa16.66■□□□□ 0.26
TRAPPC8-207ENST00000580104 CAMSAP2Q08AD1 1489 aa16.66■□□□□ 0.26
TRAPPC8-207ENST00000580104 RARSP54136 660 aaKnown RBP16.66■□□□□ 0.26
TRAPPC8-207ENST00000580104 MPNDQ8N594 471 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms