RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 AK7Q96M32 723 aa6.23□□□□□ -1.41
NF1-219ENST00000579081 CCNB3Q8WWL7 1395 aa6.23□□□□□ -1.41
NF1-219ENST00000579081 SAMD1Q6SPF0 538 aaPredicted RBP6.23□□□□□ -1.41
NF1-219ENST00000579081 ZFYVE27Q5T4F4 411 aa6.23□□□□□ -1.41
NF1-219ENST00000579081 ZNF771Q7L3S4 317 aaPredicted RBP6.23□□□□□ -1.41
NF1-219ENST00000579081 ZNF592Q92610 1267 aa6.23□□□□□ -1.41
NF1-219ENST00000579081 NAP1L1P55209 391 aaKnown RBP6.23□□□□□ -1.41
NF1-219ENST00000579081 TEX35Q5T0J7 233 aa6.23□□□□□ -1.41
NF1-219ENST00000579081 WWC2Q6AWC2 1192 aa6.23□□□□□ -1.41
NF1-219ENST00000579081 RILPL2Q969X0 211 aa6.23□□□□□ -1.41
NF1-219ENST00000579081 HOOK1Q9UJC3 728 aaKnown RBP6.23□□□□□ -1.41
NF1-219ENST00000579081 RDXP35241 583 aaKnown RBP6.22□□□□□ -1.41
NF1-219ENST00000579081 HSP90AB2PQ58FF8 381 aa6.22□□□□□ -1.41
NF1-219ENST00000579081 RCAN3Q9UKA8 241 aa6.22□□□□□ -1.41
NF1-219ENST00000579081 TERF2IPQ9NYB0 399 aa6.22□□□□□ -1.41
NF1-219ENST00000579081 KAT6BQ8WYB5 2073 aa6.22□□□□□ -1.41
NF1-219ENST00000579081 MEX3CQ5U5Q3 659 aaKnown RBP6.22□□□□□ -1.41
NF1-219ENST00000579081 DHX29Q7Z478 1369 aaKnown RBP6.22□□□□□ -1.41
NF1-219ENST00000579081 C1orf141Q5JVX7 400 aa6.22□□□□□ -1.41
NF1-219ENST00000579081 AXDND1Q5T1B0 1012 aaPredicted RBP6.22□□□□□ -1.41
NF1-219ENST00000579081 VPS37DQ86XT2 251 aa6.21□□□□□ -1.41
NF1-219ENST00000579081 CPLX1O14810 134 aa6.21□□□□□ -1.41
NF1-219ENST00000579081 CCDC173Q0VFZ6 552 aa6.21□□□□□ -1.41
NF1-219ENST00000579081 APPP05067 770 aa6.21□□□□□ -1.42
NF1-219ENST00000579081 KIF2AO00139 706 aaPredicted RBP6.21□□□□□ -1.42
NF1-219ENST00000579081 RNF20Q5VTR2 975 aa6.21□□□□□ -1.42
NF1-219ENST00000579081 HOMER1Q86YM7 354 aa6.21□□□□□ -1.42
NF1-219ENST00000579081 CCDC191Q8NCU4 936 aa6.21□□□□□ -1.42
NF1-219ENST00000579081 ERICH2A1L162 156 aa6.21□□□□□ -1.42
NF1-219ENST00000579081 TMEM132AQ24JP5 1023 aa6.21□□□□□ -1.42
NF1-219ENST00000579081 CLUAP1Q96AJ1 413 aa6.21□□□□□ -1.42
NF1-219ENST00000579081 GBP2P32456 591 aaPredicted RBP6.21□□□□□ -1.42
NF1-219ENST00000579081 DIAPH3Q9NSV4 1193 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 DCTN1Q14203 1278 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 NFXL1Q6ZNB6 911 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 MCM5P33992 734 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 TRDNQ13061 729 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 RUFY2Q8WXA3 655 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 E9PSI1 815 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 CNPY4Q8N129 248 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 OFD1O75665 1012 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 TTC5Q8N0Z6 440 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 TXLNBQ8N3L3 684 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 PHF23Q9BUL5 403 aaPredicted RBP6.2□□□□□ -1.42
NF1-219ENST00000579081 DDX49Q9Y6V7 483 aaKnown RBP6.2□□□□□ -1.42
NF1-219ENST00000579081 WASHC2AQ641Q2 1341 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 WASHC2CQ9Y4E1 1318 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 NEXNQ0ZGT2 675 aa6.2□□□□□ -1.42
NF1-219ENST00000579081 RBM33Q96EV2 1170 aaKnown RBP6.19□□□□□ -1.42
NF1-219ENST00000579081 RBM19Q9Y4C8 960 aaKnown RBP6.19□□□□□ -1.42
NF1-219ENST00000579081 RALBP1Q15311 655 aa6.19□□□□□ -1.42
NF1-219ENST00000579081 FOXD4L6Q3SYB3 417 aaPredicted RBP6.19□□□□□ -1.42
NF1-219ENST00000579081 FOXD4L3Q6VB84 417 aaPredicted RBP6.19□□□□□ -1.42
NF1-219ENST00000579081 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.19□□□□□ -1.42
NF1-219ENST00000579081 CAVIN2O95810 425 aa6.19□□□□□ -1.42
NF1-219ENST00000579081 EPS15P42566 896 aa6.19□□□□□ -1.42
NF1-219ENST00000579081 CENPJQ9HC77 1338 aaPredicted RBP6.19□□□□□ -1.42
NF1-219ENST00000579081 CUX1P39880 1505 aa6.19□□□□□ -1.42
NF1-219ENST00000579081 A6NNZ2 444 aa6.19□□□□□ -1.42
NF1-219ENST00000579081 ZRSR2Q15696 482 aaKnown RBP6.19□□□□□ -1.42
NF1-219ENST00000579081 TUBB8Q3ZCM7 444 aa6.19□□□□□ -1.42
NF1-219ENST00000579081 CNTLNQ9NXG0 1405 aa6.19□□□□□ -1.42
NF1-219ENST00000579081 ZMYM3Q14202 1370 aa6.19□□□□□ -1.42
NF1-219ENST00000579081 HSPA5P11021 654 aaKnown RBP6.19□□□□□ -1.42
NF1-219ENST00000579081 CCAR1Q8IX12 1150 aaKnown RBP6.19□□□□□ -1.42
NF1-219ENST00000579081 ANO2Q9NQ90 1003 aa6.19□□□□□ -1.42
NF1-219ENST00000579081 ZKSCAN1P17029 563 aaPredicted RBP6.18□□□□□ -1.42
NF1-219ENST00000579081 BICD2Q8TD16 824 aa6.18□□□□□ -1.42
NF1-219ENST00000579081 MYO6Q9UM54 1294 aa6.18□□□□□ -1.42
NF1-219ENST00000579081 SCRIBQ14160 1630 aa6.18□□□□□ -1.42
NF1-219ENST00000579081 KIF7Q2M1P5 1343 aa6.18□□□□□ -1.42
NF1-219ENST00000579081 AEBP2Q6ZN18 517 aaPredicted RBP6.18□□□□□ -1.42
NF1-219ENST00000579081 SMARCA2P51531 1590 aa6.18□□□□□ -1.42
NF1-219ENST00000579081 TEFQ10587 303 aa6.18□□□□□ -1.42
NF1-219ENST00000579081 SAFBQ15424 915 aaKnown RBP eCLIP6.18□□□□□ -1.42
NF1-219ENST00000579081 HOMEZQ8IX15 550 aa6.18□□□□□ -1.42
NF1-219ENST00000579081 DHX37Q8IY37 1157 aaKnown RBP6.18□□□□□ -1.42
NF1-219ENST00000579081 MNS1Q8NEH6 495 aa6.18□□□□□ -1.42
NF1-219ENST00000579081 MIA2Q96PC5 1412 aa6.18□□□□□ -1.42
NF1-219ENST00000579081 ARGLU1Q9NWB6 273 aaPredicted RBP6.18□□□□□ -1.42
NF1-219ENST00000579081 IFIT2P09913 472 aaKnown RBP6.17□□□□□ -1.42
NF1-219ENST00000579081 HSP90B2PQ58FF3 399 aa6.17□□□□□ -1.42
NF1-219ENST00000579081 SETD5Q9C0A6 1442 aa6.17□□□□□ -1.42
NF1-219ENST00000579081 NUTM2FA1L443 756 aa6.17□□□□□ -1.42
NF1-219ENST00000579081 TERF1P54274 439 aa6.17□□□□□ -1.42
NF1-219ENST00000579081 SETSIPP0DME0 302 aa6.17□□□□□ -1.42
NF1-219ENST00000579081 IKQ13123 557 aaPredicted RBP6.17□□□□□ -1.42
NF1-219ENST00000579081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.17□□□□□ -1.421e-6■□□□□ 9
NF1-219ENST00000579081 PKD2Q13563 968 aa6.17□□□□□ -1.42
NF1-219ENST00000579081 CCDC146Q8IYE0 955 aa6.17□□□□□ -1.42
NF1-219ENST00000579081 RBM28Q9NW13 759 aaKnown RBP6.17□□□□□ -1.42
NF1-219ENST00000579081 TUBBP07437 444 aa6.17□□□□□ -1.42
NF1-219ENST00000579081 NEFHP12036 1026 aa6.17□□□□□ -1.42
NF1-219ENST00000579081 ANKRD45Q5TZF3 282 aa6.17□□□□□ -1.42
NF1-219ENST00000579081 SYTL4Q96C24 671 aaPredicted RBP6.17□□□□□ -1.42
NF1-219ENST00000579081 C9orf78Q9NZ63 289 aaPredicted RBP6.16□□□□□ -1.42
NF1-219ENST00000579081 BRMS1Q9HCU9 246 aa6.16□□□□□ -1.42
NF1-219ENST00000579081 MAP3K1Q13233 1512 aa6.16□□□□□ -1.42
NF1-219ENST00000579081 CCDC7Q96M83 1385 aa6.16□□□□□ -1.42
NF1-219ENST00000579081 SASS6Q6UVJ0 657 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms