RNA–Protein interactions for RNA: ENST00000578454.5

NCOA4-201, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 1 (best) BASIC

Gene NCOA4, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-201ENST00000578454 ERVK-7P63135 1459 aa11.95□□□□□ -0.5
NCOA4-201ENST00000578454 FBXO31Q5XUX0 539 aaPredicted RBP11.95□□□□□ -0.5
NCOA4-201ENST00000578454 PIK3C2BO00750 1634 aa11.94□□□□□ -0.5
NCOA4-201ENST00000578454 EIF4G2P78344 907 aaKnown RBP eCLIP11.94□□□□□ -0.5
NCOA4-201ENST00000578454 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
NCOA4-201ENST00000578454 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
NCOA4-201ENST00000578454 ADGRB3O60242 1522 aa11.93□□□□□ -0.5
NCOA4-201ENST00000578454 IDI1Q13907 227 aa11.93□□□□□ -0.5
NCOA4-201ENST00000578454 RALGAPBQ86X10 1494 aa11.93□□□□□ -0.5
NCOA4-201ENST00000578454 RPGRIP1LQ68CZ1 1315 aa11.93□□□□□ -0.5
NCOA4-201ENST00000578454 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
NCOA4-201ENST00000578454 SPATA31D1Q6ZQQ2 1576 aa11.92□□□□□ -0.5
NCOA4-201ENST00000578454 HSPA5P11021 654 aaKnown RBP11.91□□□□□ -0.5
NCOA4-201ENST00000578454 CARD11Q9BXL7 1154 aa11.91□□□□□ -0.5
NCOA4-201ENST00000578454 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
NCOA4-201ENST00000578454 DIEXFQ68CQ4 756 aaKnown RBP11.9□□□□□ -0.5
NCOA4-201ENST00000578454 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
NCOA4-201ENST00000578454 ROCK2O75116 1388 aaKnown RBP11.9□□□□□ -0.5
NCOA4-201ENST00000578454 MYOM2P54296 1465 aa11.9□□□□□ -0.5
NCOA4-201ENST00000578454 TRPM1Q7Z4N2 1603 aa11.9□□□□□ -0.5
NCOA4-201ENST00000578454 HIRIP3Q9BW71 556 aaPredicted RBP11.89□□□□□ -0.51
NCOA4-201ENST00000578454 FER1L4A9Z1Z3 1794 aa11.89□□□□□ -0.51
NCOA4-201ENST00000578454 IFT172Q9UG01 1749 aa11.88□□□□□ -0.51
NCOA4-201ENST00000578454 MADDQ8WXG6 1647 aa11.88□□□□□ -0.51
NCOA4-201ENST00000578454 TNRQ92752 1358 aa11.88□□□□□ -0.51
NCOA4-201ENST00000578454 VGFO15240 615 aaPredicted RBP11.87□□□□□ -0.51
NCOA4-201ENST00000578454 TMEM131LA2VDJ0 1609 aa11.87□□□□□ -0.51
NCOA4-201ENST00000578454 PPLO60437 1756 aa11.87□□□□□ -0.51
NCOA4-201ENST00000578454 USP47Q96K76 1375 aa11.87□□□□□ -0.51
NCOA4-201ENST00000578454 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
NCOA4-201ENST00000578454 GPRASP1Q5JY77 1395 aa11.86□□□□□ -0.51
NCOA4-201ENST00000578454 NBPF1Q3BBV0 1214 aa11.86□□□□□ -0.51
NCOA4-201ENST00000578454 ADGRF5Q8IZF2 1346 aa11.86□□□□□ -0.51
NCOA4-201ENST00000578454 NRXN1Q9ULB1 1477 aa11.85□□□□□ -0.51
NCOA4-201ENST00000578454 CEBPAP49715 358 aaPredicted RBP11.85□□□□□ -0.51
NCOA4-201ENST00000578454 LAMC1P11047 1609 aa11.85□□□□□ -0.51
NCOA4-201ENST00000578454 KIAA1210Q9ULL0 1709 aa11.85□□□□□ -0.51
NCOA4-201ENST00000578454 C3P01024 1663 aa11.85□□□□□ -0.51
NCOA4-201ENST00000578454 NEXMIFQ5QGS0 1516 aa11.84□□□□□ -0.51
NCOA4-201ENST00000578454 ZFYVE9O95405 1425 aa11.83□□□□□ -0.51
NCOA4-201ENST00000578454 MYO5BQ9ULV0 1848 aa11.83□□□□□ -0.51
NCOA4-201ENST00000578454 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.51
NCOA4-201ENST00000578454 TMEM132AQ24JP5 1023 aa11.83□□□□□ -0.52
NCOA4-201ENST00000578454 A2ML1A8K2U0 1454 aa11.83□□□□□ -0.52
NCOA4-201ENST00000578454 NLRP1Q9C000 1473 aa11.83□□□□□ -0.52
NCOA4-201ENST00000578454 CFAP70Q5T0N1 1121 aa11.82□□□□□ -0.52
NCOA4-201ENST00000578454 ADAMTSL3P82987 1691 aa11.82□□□□□ -0.52
NCOA4-201ENST00000578454 HDGFP51858 240 aaKnown RBP11.82□□□□□ -0.52
NCOA4-201ENST00000578454 NUTM2DQ5VT03 806 aaPredicted RBP11.82□□□□□ -0.52
NCOA4-201ENST00000578454 RIMS1Q86UR5 1692 aaKnown RBP11.82□□□□□ -0.52
NCOA4-201ENST00000578454 PIK3C2GO75747 1445 aa11.82□□□□□ -0.52
NCOA4-201ENST00000578454 C14orf93Q9H972 538 aaKnown RBP11.81□□□□□ -0.52
NCOA4-201ENST00000578454 KDM5AP29375 1690 aaKnown RBP11.81□□□□□ -0.52
NCOA4-201ENST00000578454 ST20-MTHFSA0A0A6YYL1 179 aa11.81□□□□□ -0.52
NCOA4-201ENST00000578454 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.81□□□□□ -0.52
NCOA4-201ENST00000578454 RIMS2Q9UQ26 1411 aa11.8□□□□□ -0.52
NCOA4-201ENST00000578454 DDX10Q13206 875 aaKnown RBP11.79□□□□□ -0.52
NCOA4-201ENST00000578454 SCAF11Q99590 1463 aaKnown RBP11.79□□□□□ -0.52
NCOA4-201ENST00000578454 WASHC2AQ641Q2 1341 aa11.78□□□□□ -0.52
NCOA4-201ENST00000578454 EIF3AQ14152 1382 aaKnown RBP11.78□□□□□ -0.52
NCOA4-201ENST00000578454 SETBP1Q9Y6X0 1596 aa11.78□□□□□ -0.52
NCOA4-201ENST00000578454 UBR1Q8IWV7 1749 aa11.78□□□□□ -0.52
NCOA4-201ENST00000578454 CCDC7Q96M83 1385 aa11.77□□□□□ -0.52
NCOA4-201ENST00000578454 IQGAP1P46940 1657 aa11.77□□□□□ -0.53
NCOA4-201ENST00000578454 C11orf95C9JLR9 678 aaPredicted RBP11.76□□□□□ -0.53
NCOA4-201ENST00000578454 TMEM2Q9UHN6 1383 aa11.76□□□□□ -0.53
NCOA4-201ENST00000578454 POLR1AO95602 1720 aaPredicted RBP11.76□□□□□ -0.53
NCOA4-201ENST00000578454 THEMISQ8N1K5 641 aaPredicted RBP11.76□□□□□ -0.53
NCOA4-201ENST00000578454 KIF7Q2M1P5 1343 aa11.76□□□□□ -0.53
NCOA4-201ENST00000578454 MYO3AQ8NEV4 1616 aa11.74□□□□□ -0.53
NCOA4-201ENST00000578454 TMEM132EQ6IEE7 984 aa11.74□□□□□ -0.53
NCOA4-201ENST00000578454 EID1Q9Y6B2 187 aa11.74□□□□□ -0.53
NCOA4-201ENST00000578454 ADGRB1O14514 1584 aa11.74□□□□□ -0.53
NCOA4-201ENST00000578454 TMF1P82094 1093 aa11.73□□□□□ -0.53
NCOA4-201ENST00000578454 TESK2Q96S53 571 aa11.73□□□□□ -0.53
NCOA4-201ENST00000578454 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
NCOA4-201ENST00000578454 PTPRMP28827 1452 aa11.72□□□□□ -0.53
NCOA4-201ENST00000578454 ALKQ9UM73 1620 aa11.72□□□□□ -0.53
NCOA4-201ENST00000578454 TXNDC2Q86VQ3 553 aa11.72□□□□□ -0.53
NCOA4-201ENST00000578454 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
NCOA4-201ENST00000578454 SETD1BQ9UPS6 1966 aaKnown RBP11.71□□□□□ -0.53
NCOA4-201ENST00000578454 CEP170BQ9Y4F5 1589 aaPredicted RBP11.71□□□□□ -0.53
NCOA4-201ENST00000578454 SLIT1O75093 1534 aa11.71□□□□□ -0.53
NCOA4-201ENST00000578454 ARHGAP23Q9P227 1491 aa11.7□□□□□ -0.54
NCOA4-201ENST00000578454 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
NCOA4-201ENST00000578454 MIER1Q8N108 512 aa11.7□□□□□ -0.54
NCOA4-201ENST00000578454 CENPJQ9HC77 1338 aaPredicted RBP11.7□□□□□ -0.54
NCOA4-201ENST00000578454 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
NCOA4-201ENST00000578454 LTKP29376 864 aa11.69□□□□□ -0.54
NCOA4-201ENST00000578454 PLEKHG1Q9ULL1 1385 aa11.69□□□□□ -0.54
NCOA4-201ENST00000578454 STK26Q9P289 416 aa11.69□□□□□ -0.54
NCOA4-201ENST00000578454 ZNF142P52746 1687 aaPredicted RBP11.68□□□□□ -0.54
NCOA4-201ENST00000578454 YTHDC2Q9H6S0 1430 aaKnown RBP11.68□□□□□ -0.54
NCOA4-201ENST00000578454 DISP3Q9P2K9 1392 aa11.68□□□□□ -0.54
NCOA4-201ENST00000578454 ASXL1Q8IXJ9 1541 aa11.68□□□□□ -0.54
NCOA4-201ENST00000578454 SBNO2Q9Y2G9 1366 aa11.68□□□□□ -0.54
NCOA4-201ENST00000578454 NRXN3Q9Y4C0 1643 aa11.67□□□□□ -0.54
NCOA4-201ENST00000578454 ANP32CO43423 234 aa11.67□□□□□ -0.54
NCOA4-201ENST00000578454 LRPPRCP42704 1394 aaKnown RBP11.66□□□□□ -0.54
NCOA4-201ENST00000578454 ANKLE2Q86XL3 938 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms