RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ZNF326Q5BKZ1 582 aaKnown RBP19.11■□□□□ 0.65
SRSF1-202ENST00000578430 PRAG1Q86YV5 1406 aa19.1■□□□□ 0.65
SRSF1-202ENST00000578430 NBPF8Q3BBV2 869 aa19.1■□□□□ 0.65
SRSF1-202ENST00000578430 KDM2AQ9Y2K7 1162 aa19.1■□□□□ 0.65
SRSF1-202ENST00000578430 IFT172Q9UG01 1749 aa19.09■□□□□ 0.65
SRSF1-202ENST00000578430 CEBPAP49715 358 aaPredicted RBP19.09■□□□□ 0.65
SRSF1-202ENST00000578430 STAG3Q9UJ98 1225 aa19.09■□□□□ 0.65
SRSF1-202ENST00000578430 RALGAPBQ86X10 1494 aa19.08■□□□□ 0.64
SRSF1-202ENST00000578430 CERKQ8TCT0 537 aa19.07■□□□□ 0.64
SRSF1-202ENST00000578430 A2ML1A8K2U0 1454 aa19.07■□□□□ 0.64
SRSF1-202ENST00000578430 ZFYVE9O95405 1425 aa19.07■□□□□ 0.64
SRSF1-202ENST00000578430 PPLO60437 1756 aa19.06■□□□□ 0.64
SRSF1-202ENST00000578430 NRXN1Q9ULB1 1477 aa19.05■□□□□ 0.64
SRSF1-202ENST00000578430 VGFO15240 615 aaPredicted RBP19.05■□□□□ 0.64
SRSF1-202ENST00000578430 NEXMIFQ5QGS0 1516 aa19.05■□□□□ 0.64
SRSF1-202ENST00000578430 STRCQ7RTU9 1775 aa19.04■□□□□ 0.64
SRSF1-202ENST00000578430 SETD1BQ9UPS6 1966 aaKnown RBP19.03■□□□□ 0.64
SRSF1-202ENST00000578430 MYO5BQ9ULV0 1848 aa19.03■□□□□ 0.64
SRSF1-202ENST00000578430 HDGFP51858 240 aaKnown RBP19.03■□□□□ 0.64
SRSF1-202ENST00000578430 TRPM1Q7Z4N2 1603 aa19.02■□□□□ 0.64
SRSF1-202ENST00000578430 KIAA1210Q9ULL0 1709 aa19.02■□□□□ 0.63
SRSF1-202ENST00000578430 MYO3AQ8NEV4 1616 aa19.01■□□□□ 0.63
SRSF1-202ENST00000578430 UBR1Q8IWV7 1749 aa19.01■□□□□ 0.63
SRSF1-202ENST00000578430 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.01■□□□□ 0.63
SRSF1-202ENST00000578430 GPRASP1Q5JY77 1395 aa19■□□□□ 0.63
SRSF1-202ENST00000578430 ADGRF5Q8IZF2 1346 aa19■□□□□ 0.63
SRSF1-202ENST00000578430 ZNF316A6NFI3 1004 aaPredicted RBP18.99■□□□□ 0.63
SRSF1-202ENST00000578430 LAMC1P11047 1609 aa18.99■□□□□ 0.63
SRSF1-202ENST00000578430 RIMS2Q9UQ26 1411 aa18.99■□□□□ 0.63
SRSF1-202ENST00000578430 ROCK2O75116 1388 aaKnown RBP18.98■□□□□ 0.63
SRSF1-202ENST00000578430 PIK3C2GO75747 1445 aa18.98■□□□□ 0.63
SRSF1-202ENST00000578430 TMEM2Q9UHN6 1383 aa18.97■□□□□ 0.63
SRSF1-202ENST00000578430 EIF4G2P78344 907 aaKnown RBP eCLIP18.97■□□□□ 0.63
SRSF1-202ENST00000578430 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
SRSF1-202ENST00000578430 ZNF142P52746 1687 aaPredicted RBP18.96■□□□□ 0.63
SRSF1-202ENST00000578430 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
SRSF1-202ENST00000578430 CEP170BQ9Y4F5 1589 aaPredicted RBP18.96■□□□□ 0.63
SRSF1-202ENST00000578430 SLIT1O75093 1534 aa18.95■□□□□ 0.62
SRSF1-202ENST00000578430 C14orf93Q9H972 538 aaKnown RBP18.94■□□□□ 0.62
SRSF1-202ENST00000578430 ARHGAP23Q9P227 1491 aa18.94■□□□□ 0.62
SRSF1-202ENST00000578430 SETBP1Q9Y6X0 1596 aa18.93■□□□□ 0.62
SRSF1-202ENST00000578430 DMRT2Q9Y5R5 561 aa18.92■□□□□ 0.62
SRSF1-202ENST00000578430 NBPF1Q3BBV0 1214 aa18.91■□□□□ 0.62
SRSF1-202ENST00000578430 EID1Q9Y6B2 187 aa18.91■□□□□ 0.62
SRSF1-202ENST00000578430 USP47Q96K76 1375 aa18.91■□□□□ 0.62
SRSF1-202ENST00000578430 HSPA5P11021 654 aaKnown RBP18.9■□□□□ 0.62
SRSF1-202ENST00000578430 CFAP70Q5T0N1 1121 aa18.9■□□□□ 0.62
SRSF1-202ENST00000578430 NUTM2DQ5VT03 806 aaPredicted RBP18.88■□□□□ 0.61
SRSF1-202ENST00000578430 SCAF11Q99590 1463 aaKnown RBP18.87■□□□□ 0.61
SRSF1-202ENST00000578430 PLEKHG1Q9ULL1 1385 aa18.87■□□□□ 0.61
SRSF1-202ENST00000578430 TXNDC2Q86VQ3 553 aa18.86■□□□□ 0.61
SRSF1-202ENST00000578430 IQGAP1P46940 1657 aa18.85■□□□□ 0.61
SRSF1-202ENST00000578430 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
SRSF1-202ENST00000578430 ADGRB1O14514 1584 aa18.85■□□□□ 0.61
SRSF1-202ENST00000578430 EIF3AQ14152 1382 aaKnown RBP18.84■□□□□ 0.61
SRSF1-202ENST00000578430 LTKP29376 864 aa18.83■□□□□ 0.6
SRSF1-202ENST00000578430 SLC24A1O60721 1099 aa18.82■□□□□ 0.6
SRSF1-202ENST00000578430 ANKLE2Q86XL3 938 aa18.82■□□□□ 0.6
SRSF1-202ENST00000578430 LTBP4Q8N2S1 1624 aa18.81■□□□□ 0.6
SRSF1-202ENST00000578430 NRXN3Q9Y4C0 1643 aa18.81■□□□□ 0.6
SRSF1-202ENST00000578430 DISP3Q9P2K9 1392 aa18.81■□□□□ 0.6
SRSF1-202ENST00000578430 ST20-MTHFSA0A0A6YYL1 179 aa18.79■□□□□ 0.6
SRSF1-202ENST00000578430 DIP2AQ14689 1571 aa18.79■□□□□ 0.6
SRSF1-202ENST00000578430 SETD1AO15047 1707 aaKnown RBP18.79■□□□□ 0.6
SRSF1-202ENST00000578430 ILDR2Q71H61 639 aa18.78■□□□□ 0.6
SRSF1-202ENST00000578430 HIRIP3Q9BW71 556 aaPredicted RBP18.78■□□□□ 0.6
SRSF1-202ENST00000578430 ASXL1Q8IXJ9 1541 aa18.78■□□□□ 0.6
SRSF1-202ENST00000578430 MED14O60244 1454 aa18.77■□□□□ 0.6
SRSF1-202ENST00000578430 ADAMTS13Q76LX8 1427 aa18.77■□□□□ 0.6
SRSF1-202ENST00000578430 TMEM132EQ6IEE7 984 aa18.77■□□□□ 0.6
SRSF1-202ENST00000578430 BCANQ96GW7 911 aa18.77■□□□□ 0.6
SRSF1-202ENST00000578430 TBX22Q9Y458 520 aa18.77■□□□□ 0.6
SRSF1-202ENST00000578430 LRPPRCP42704 1394 aaKnown RBP18.76■□□□□ 0.59
SRSF1-202ENST00000578430 YTHDC2Q9H6S0 1430 aaKnown RBP18.75■□□□□ 0.59
SRSF1-202ENST00000578430 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
SRSF1-202ENST00000578430 ABCC11Q96J66 1382 aa18.74■□□□□ 0.59
SRSF1-202ENST00000578430 SBNO2Q9Y2G9 1366 aa18.74■□□□□ 0.59
SRSF1-202ENST00000578430 TESK2Q96S53 571 aa18.73■□□□□ 0.59
SRSF1-202ENST00000578430 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
SRSF1-202ENST00000578430 POLR1AO95602 1720 aaPredicted RBP18.73■□□□□ 0.59
SRSF1-202ENST00000578430 DLC1Q96QB1 1528 aa18.73■□□□□ 0.59
SRSF1-202ENST00000578430 PIK3R4Q99570 1358 aa18.72■□□□□ 0.59
SRSF1-202ENST00000578430 SIRT1Q96EB6 747 aa18.72■□□□□ 0.59
SRSF1-202ENST00000578430 CENPJQ9HC77 1338 aaPredicted RBP18.72■□□□□ 0.59
SRSF1-202ENST00000578430 NCKAP5LQ9HCH0 1330 aa18.72■□□□□ 0.59
SRSF1-202ENST00000578430 METP08581 1390 aa18.71■□□□□ 0.59
SRSF1-202ENST00000578430 IQSEC2Q5JU85 1478 aa18.71■□□□□ 0.59
SRSF1-202ENST00000578430 CCDC7Q96M83 1385 aa18.7■□□□□ 0.58
SRSF1-202ENST00000578430 TECPR2O15040 1411 aa18.7■□□□□ 0.58
SRSF1-202ENST00000578430 NPHP4O75161 1426 aaPredicted RBP18.7■□□□□ 0.58
SRSF1-202ENST00000578430 TMF1P82094 1093 aa18.7■□□□□ 0.58
SRSF1-202ENST00000578430 ARHGEF28Q8N1W1 1705 aaKnown RBP18.7■□□□□ 0.58
SRSF1-202ENST00000578430 KNDC1Q76NI1 1749 aa18.69■□□□□ 0.58
SRSF1-202ENST00000578430 CDCA8Q53HL2 280 aa18.69■□□□□ 0.58
SRSF1-202ENST00000578430 WASHC2AQ641Q2 1341 aa18.69■□□□□ 0.58
SRSF1-202ENST00000578430 SLC26A8Q96RN1 970 aa18.68■□□□□ 0.58
SRSF1-202ENST00000578430 STK26Q9P289 416 aa18.68■□□□□ 0.58
SRSF1-202ENST00000578430 FAM135BQ49AJ0 1406 aa18.67■□□□□ 0.58
SRSF1-202ENST00000578430 KIF7Q2M1P5 1343 aa18.67■□□□□ 0.58
SRSF1-202ENST00000578430 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms