RNA–Protein interactions for RNA: ENST00000578328.6

IKBKE-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit epsilon, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IKBKE, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKE-201ENST00000578328 NEURL4Q96JN8 1562 aa18.82■□□□□ 0.6
IKBKE-201ENST00000578328 COL17A1Q9UMD9 1497 aaPredicted RBP18.81■□□□□ 0.6
IKBKE-201ENST00000578328 TMF1P82094 1093 aa18.81■□□□□ 0.6
IKBKE-201ENST00000578328 CAMSAP1Q5T5Y3 1602 aa18.8■□□□□ 0.6
IKBKE-201ENST00000578328 IQGAP1P46940 1657 aa18.79■□□□□ 0.6
IKBKE-201ENST00000578328 SIGLEC1Q9BZZ2 1709 aa18.78■□□□□ 0.6
IKBKE-201ENST00000578328 SCAF11Q99590 1463 aaKnown RBP18.78■□□□□ 0.6
IKBKE-201ENST00000578328 MYOM2P54296 1465 aa18.77■□□□□ 0.6
IKBKE-201ENST00000578328 NOS1P29475 1434 aa18.77■□□□□ 0.6
IKBKE-201ENST00000578328 IFT172Q9UG01 1749 aa18.77■□□□□ 0.59
IKBKE-201ENST00000578328 ADGRB3O60242 1522 aa18.77■□□□□ 0.59
IKBKE-201ENST00000578328 ZMYM4Q5VZL5 1548 aa18.75■□□□□ 0.59
IKBKE-201ENST00000578328 PER1O15534 1290 aaPredicted RBP18.75■□□□□ 0.59
IKBKE-201ENST00000578328 PANK3Q9H999 370 aa18.75■□□□□ 0.59
IKBKE-201ENST00000578328 KIAA1210Q9ULL0 1709 aa18.74■□□□□ 0.59
IKBKE-201ENST00000578328 MSH5O43196 834 aa18.74■□□□□ 0.59
IKBKE-201ENST00000578328 NUTM2DQ5VT03 806 aaPredicted RBP18.73■□□□□ 0.59
IKBKE-201ENST00000578328 TMC1Q8TDI8 760 aa18.72■□□□□ 0.59
IKBKE-201ENST00000578328 SYNMO15061 1565 aa18.72■□□□□ 0.59
IKBKE-201ENST00000578328 KIF13AQ9H1H9 1805 aa18.71■□□□□ 0.59
IKBKE-201ENST00000578328 IDI1Q13907 227 aa18.71■□□□□ 0.59
IKBKE-201ENST00000578328 RALBP1Q15311 655 aa18.71■□□□□ 0.59
IKBKE-201ENST00000578328 NRXN1Q9ULB1 1477 aa18.71■□□□□ 0.59
IKBKE-201ENST00000578328 ZC3H13Q5T200 1668 aaKnown RBP18.7■□□□□ 0.58
IKBKE-201ENST00000578328 ARHGAP31Q2M1Z3 1444 aa18.7■□□□□ 0.58
IKBKE-201ENST00000578328 PPLO60437 1756 aa18.7■□□□□ 0.58
IKBKE-201ENST00000578328 EIF3AQ14152 1382 aaKnown RBP18.7■□□□□ 0.58
IKBKE-201ENST00000578328 CC2D1BQ5T0F9 858 aaKnown RBP18.69■□□□□ 0.58
IKBKE-201ENST00000578328 BCL11AQ9H165 835 aa18.69■□□□□ 0.58
IKBKE-201ENST00000578328 MYBBP1AQ9BQG0 1328 aaKnown RBP18.69■□□□□ 0.58
IKBKE-201ENST00000578328 FBXO31Q5XUX0 539 aaPredicted RBP18.68■□□□□ 0.58
IKBKE-201ENST00000578328 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
IKBKE-201ENST00000578328 PIK3C2BO00750 1634 aa18.68■□□□□ 0.58
IKBKE-201ENST00000578328 RPGRIP1LQ68CZ1 1315 aa18.67■□□□□ 0.58
IKBKE-201ENST00000578328 MLECQ14165 292 aa18.67■□□□□ 0.58
IKBKE-201ENST00000578328 TMEM132EQ6IEE7 984 aa18.67■□□□□ 0.58
IKBKE-201ENST00000578328 PNISRQ8TF01 805 aaKnown RBP18.67■□□□□ 0.58
IKBKE-201ENST00000578328 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
IKBKE-201ENST00000578328 C14orf93Q9H972 538 aaKnown RBP18.66■□□□□ 0.58
IKBKE-201ENST00000578328 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
IKBKE-201ENST00000578328 CDCA8Q53HL2 280 aa18.66■□□□□ 0.58
IKBKE-201ENST00000578328 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
IKBKE-201ENST00000578328 SLC52A1Q9NWF4 448 aa18.65■□□□□ 0.58
IKBKE-201ENST00000578328 TRAK1Q9UPV9 953 aa18.65■□□□□ 0.58
IKBKE-201ENST00000578328 PARD3Q8TEW0 1356 aa18.65■□□□□ 0.58
IKBKE-201ENST00000578328 PREX1Q8TCU6 1659 aa18.63■□□□□ 0.57
IKBKE-201ENST00000578328 ZBED9Q6R2W3 1325 aa18.63■□□□□ 0.57
IKBKE-201ENST00000578328 VGFO15240 615 aaPredicted RBP18.63■□□□□ 0.57
IKBKE-201ENST00000578328 BRD4O60885 1362 aaPredicted RBP18.63■□□□□ 0.57
IKBKE-201ENST00000578328 NLRP13Q86W25 1043 aa18.61■□□□□ 0.57
IKBKE-201ENST00000578328 NEXMIFQ5QGS0 1516 aa18.61■□□□□ 0.57
IKBKE-201ENST00000578328 MYO5BQ9ULV0 1848 aa18.61■□□□□ 0.57
IKBKE-201ENST00000578328 KNSTRNQ9Y448 316 aa18.61■□□□□ 0.57
IKBKE-201ENST00000578328 SETBP1Q9Y6X0 1596 aa18.6■□□□□ 0.57
IKBKE-201ENST00000578328 REREQ9P2R6 1566 aa18.6■□□□□ 0.57
IKBKE-201ENST00000578328 CENPJQ9HC77 1338 aaPredicted RBP18.59■□□□□ 0.57
IKBKE-201ENST00000578328 AGLP35573 1532 aa18.59■□□□□ 0.57
IKBKE-201ENST00000578328 ERVK-7P63135 1459 aa18.59■□□□□ 0.57
IKBKE-201ENST00000578328 ADGRB1O14514 1584 aa18.58■□□□□ 0.57
IKBKE-201ENST00000578328 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.56
IKBKE-201ENST00000578328 CLTCQ00610 1675 aaKnown RBP18.58■□□□□ 0.56
IKBKE-201ENST00000578328 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
IKBKE-201ENST00000578328 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
IKBKE-201ENST00000578328 MYOM1P52179 1685 aa18.56■□□□□ 0.56
IKBKE-201ENST00000578328 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
IKBKE-201ENST00000578328 TMEM131LA2VDJ0 1609 aa18.56■□□□□ 0.56
IKBKE-201ENST00000578328 AMER1Q5JTC6 1135 aaPredicted RBP18.55■□□□□ 0.56
IKBKE-201ENST00000578328 LRPPRCP42704 1394 aaKnown RBP18.55■□□□□ 0.56
IKBKE-201ENST00000578328 MYO3AQ8NEV4 1616 aa18.54■□□□□ 0.56
IKBKE-201ENST00000578328 ARHGEF40Q8TER5 1519 aa18.54■□□□□ 0.56
IKBKE-201ENST00000578328 SBNO2Q9Y2G9 1366 aa18.53■□□□□ 0.56
IKBKE-201ENST00000578328 ESF1Q9H501 851 aaKnown RBP18.51■□□□□ 0.55
IKBKE-201ENST00000578328 STK26Q9P289 416 aa18.51■□□□□ 0.55
IKBKE-201ENST00000578328 QRICH2Q9H0J4 1663 aa18.51■□□□□ 0.55
IKBKE-201ENST00000578328 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
IKBKE-201ENST00000578328 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
IKBKE-201ENST00000578328 CARD14Q9BXL6 1004 aa18.49■□□□□ 0.55
IKBKE-201ENST00000578328 ASXL1Q8IXJ9 1541 aa18.49■□□□□ 0.55
IKBKE-201ENST00000578328 B4GALNT3Q6L9W6 998 aa18.48■□□□□ 0.55
IKBKE-201ENST00000578328 PPP2R1AP30153 589 aa18.48■□□□□ 0.55
IKBKE-201ENST00000578328 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
IKBKE-201ENST00000578328 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
IKBKE-201ENST00000578328 ZMYM3Q14202 1370 aa18.46■□□□□ 0.55
IKBKE-201ENST00000578328 ARHGEF28Q8N1W1 1705 aaKnown RBP18.46■□□□□ 0.55
IKBKE-201ENST00000578328 FANCIQ9NVI1 1328 aa18.46■□□□□ 0.54
IKBKE-201ENST00000578328 SPATA31D1Q6ZQQ2 1576 aa18.45■□□□□ 0.54
IKBKE-201ENST00000578328 A2ML1A8K2U0 1454 aa18.43■□□□□ 0.54
IKBKE-201ENST00000578328 EVC2Q86UK5 1308 aa18.42■□□□□ 0.54
IKBKE-201ENST00000578328 NPC1L1Q9UHC9 1359 aa18.42■□□□□ 0.54
IKBKE-201ENST00000578328 SMG6Q86US8 1419 aaKnown RBP18.42■□□□□ 0.54
IKBKE-201ENST00000578328 CABP2Q9NPB3 220 aa18.42■□□□□ 0.54
IKBKE-201ENST00000578328 NUDCQ9Y266 331 aa18.42■□□□□ 0.54
IKBKE-201ENST00000578328 PPP4R2Q9NY27 417 aa18.41■□□□□ 0.54
IKBKE-201ENST00000578328 ADAMTS8Q9UP79 889 aa18.41■□□□□ 0.54
IKBKE-201ENST00000578328 PRAM1Q96QH2 718 aa18.4■□□□□ 0.54
IKBKE-201ENST00000578328 ALKQ9UM73 1620 aa18.4■□□□□ 0.54
IKBKE-201ENST00000578328 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
IKBKE-201ENST00000578328 YTHDC2Q9H6S0 1430 aaKnown RBP18.39■□□□□ 0.53
IKBKE-201ENST00000578328 TULP4Q9NRJ4 1543 aa18.39■□□□□ 0.53
IKBKE-201ENST00000578328 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms