RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PLEKHG1Q9ULL1 1385 aa17.46■□□□□ 0.39
SMARCE1-214ENST00000578112 ZFYVE9O95405 1425 aa17.46■□□□□ 0.38
SMARCE1-214ENST00000578112 TMEM131LA2VDJ0 1609 aa17.44■□□□□ 0.38
SMARCE1-214ENST00000578112 CHD2O14647 1828 aaKnown RBP17.44■□□□□ 0.38
SMARCE1-214ENST00000578112 TMEM94Q12767 1356 aa17.44■□□□□ 0.38
SMARCE1-214ENST00000578112 IQGAP3Q86VI3 1631 aa17.43■□□□□ 0.38
SMARCE1-214ENST00000578112 PIK3R4Q99570 1358 aa17.43■□□□□ 0.38
SMARCE1-214ENST00000578112 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMARCE1-214ENST00000578112 ROBO1Q9Y6N7 1651 aa17.42■□□□□ 0.38
SMARCE1-214ENST00000578112 MSH6P52701 1360 aa17.4■□□□□ 0.38
SMARCE1-214ENST00000578112 RIMS2Q9UQ26 1411 aa17.4■□□□□ 0.38
SMARCE1-214ENST00000578112 PROSER2Q86WR7 435 aaPredicted RBP17.38■□□□□ 0.37
SMARCE1-214ENST00000578112 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
SMARCE1-214ENST00000578112 TBX22Q9Y458 520 aa17.38■□□□□ 0.37
SMARCE1-214ENST00000578112 E9PCH4 1651 aa17.38■□□□□ 0.37
SMARCE1-214ENST00000578112 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
SMARCE1-214ENST00000578112 TRPM2O94759 1503 aa17.35■□□□□ 0.37
SMARCE1-214ENST00000578112 PHLPP1O60346 1717 aa17.34■□□□□ 0.37
SMARCE1-214ENST00000578112 FAM50AQ14320 339 aaKnown RBP17.33■□□□□ 0.37
SMARCE1-214ENST00000578112 AHDC1Q5TGY3 1603 aaPredicted RBP17.32■□□□□ 0.36
SMARCE1-214ENST00000578112 SLC26A8Q96RN1 970 aa17.32■□□□□ 0.36
SMARCE1-214ENST00000578112 JCADQ9P266 1359 aa17.32■□□□□ 0.36
SMARCE1-214ENST00000578112 DCCP43146 1447 aa17.31■□□□□ 0.36
SMARCE1-214ENST00000578112 PPP1R15AO75807 674 aaPredicted RBP17.31■□□□□ 0.36
SMARCE1-214ENST00000578112 ADAMTS13Q76LX8 1427 aa17.31■□□□□ 0.36
SMARCE1-214ENST00000578112 COL16A1Q07092 1604 aaPredicted RBP17.3■□□□□ 0.36
SMARCE1-214ENST00000578112 SETBP1Q9Y6X0 1596 aa17.29■□□□□ 0.36
SMARCE1-214ENST00000578112 SLAIN2Q9P270 581 aa17.29■□□□□ 0.36
SMARCE1-214ENST00000578112 RGS17Q9UGC6 210 aaPredicted RBP17.29■□□□□ 0.36
SMARCE1-214ENST00000578112 SHPRHQ149N8 1683 aa17.28■□□□□ 0.36
SMARCE1-214ENST00000578112 BCANQ96GW7 911 aa17.28■□□□□ 0.36
SMARCE1-214ENST00000578112 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.36
SMARCE1-214ENST00000578112 SPATA31A6Q5VVP1 1343 aa17.27■□□□□ 0.36
SMARCE1-214ENST00000578112 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.26■□□□□ 0.35
SMARCE1-214ENST00000578112 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
SMARCE1-214ENST00000578112 CADPS2Q86UW7 1296 aa17.26■□□□□ 0.35
SMARCE1-214ENST00000578112 C19orf44Q9H6X5 657 aa17.24■□□□□ 0.35
SMARCE1-214ENST00000578112 NUP155O75694 1391 aa17.23■□□□□ 0.35
SMARCE1-214ENST00000578112 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
SMARCE1-214ENST00000578112 ATF3P18847 181 aa17.19■□□□□ 0.34
SMARCE1-214ENST00000578112 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
SMARCE1-214ENST00000578112 NHSL1Q5SYE7 1610 aa17.18■□□□□ 0.34
SMARCE1-214ENST00000578112 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
SMARCE1-214ENST00000578112 POTEAQ6S8J7 498 aa17.17■□□□□ 0.34
SMARCE1-214ENST00000578112 CDK12Q9NYV4 1490 aaPredicted RBP17.17■□□□□ 0.34
SMARCE1-214ENST00000578112 ZNF772Q68DY9 489 aaPredicted RBP17.16■□□□□ 0.34
SMARCE1-214ENST00000578112 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
SMARCE1-214ENST00000578112 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
SMARCE1-214ENST00000578112 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
SMARCE1-214ENST00000578112 KIF1BO60333 1816 aa17.16■□□□□ 0.34
SMARCE1-214ENST00000578112 LAMC1P11047 1609 aa17.15■□□□□ 0.34
SMARCE1-214ENST00000578112 NEXMIFQ5QGS0 1516 aa17.15■□□□□ 0.34
SMARCE1-214ENST00000578112 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
SMARCE1-214ENST00000578112 RRBP1Q9P2E9 1410 aaKnown RBP17.15■□□□□ 0.34
SMARCE1-214ENST00000578112 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
SMARCE1-214ENST00000578112 ASXL1Q8IXJ9 1541 aa17.15■□□□□ 0.34
SMARCE1-214ENST00000578112 C14orf37Q86TY3 774 aa17.14■□□□□ 0.33
SMARCE1-214ENST00000578112 CLTCL1P53675 1640 aa17.13■□□□□ 0.33
SMARCE1-214ENST00000578112 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
SMARCE1-214ENST00000578112 LRP6O75581 1613 aa17.13■□□□□ 0.33
SMARCE1-214ENST00000578112 MST1RQ04912 1400 aa17.12■□□□□ 0.33
SMARCE1-214ENST00000578112 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
SMARCE1-214ENST00000578112 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
SMARCE1-214ENST00000578112 RPGRIP1LQ68CZ1 1315 aa17.1■□□□□ 0.33
SMARCE1-214ENST00000578112 BRINP3Q76B58 766 aa17.09■□□□□ 0.33
SMARCE1-214ENST00000578112 NALCNQ8IZF0 1738 aa17.07■□□□□ 0.32
SMARCE1-214ENST00000578112 MEX3CQ5U5Q3 659 aaKnown RBP17.07■□□□□ 0.32
SMARCE1-214ENST00000578112 NAIPQ13075 1403 aa17.07■□□□□ 0.32
SMARCE1-214ENST00000578112 ACIN1Q9UKV3 1341 aaKnown RBP17.05■□□□□ 0.32
SMARCE1-214ENST00000578112 LRRC59Q96AG4 307 aaKnown RBP17.05■□□□□ 0.32
SMARCE1-214ENST00000578112 METP08581 1390 aa17.05■□□□□ 0.32
SMARCE1-214ENST00000578112 HFM1A2PYH4 1435 aa17.05■□□□□ 0.32
SMARCE1-214ENST00000578112 ZNF326Q5BKZ1 582 aaKnown RBP17.04■□□□□ 0.32
SMARCE1-214ENST00000578112 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
SMARCE1-214ENST00000578112 PPLO60437 1756 aa17.03■□□□□ 0.32
SMARCE1-214ENST00000578112 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
SMARCE1-214ENST00000578112 COL22A1Q8NFW1 1626 aaPredicted RBP17.01■□□□□ 0.31
SMARCE1-214ENST00000578112 PNPLA6Q8IY17 1366 aa17■□□□□ 0.31
SMARCE1-214ENST00000578112 C1orf167Q5SNV9 1468 aa17■□□□□ 0.31
SMARCE1-214ENST00000578112 RXRBP28702 533 aa17■□□□□ 0.31
SMARCE1-214ENST00000578112 CDC42BPGQ6DT37 1551 aa16.99■□□□□ 0.31
SMARCE1-214ENST00000578112 ITGAEP38570 1179 aa16.98■□□□□ 0.31
SMARCE1-214ENST00000578112 KNDC1Q76NI1 1749 aa16.97■□□□□ 0.31
SMARCE1-214ENST00000578112 SOS2Q07890 1332 aaPredicted RBP16.95■□□□□ 0.3
SMARCE1-214ENST00000578112 UPF1Q92900 1129 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMARCE1-214ENST00000578112 TECPR2O15040 1411 aa16.95■□□□□ 0.3
SMARCE1-214ENST00000578112 AFF2P51816 1311 aa16.95■□□□□ 0.3
SMARCE1-214ENST00000578112 IFT172Q9UG01 1749 aa16.94■□□□□ 0.3
SMARCE1-214ENST00000578112 RBM6P78332 1123 aaKnown RBP16.93■□□□□ 0.3
SMARCE1-214ENST00000578112 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
SMARCE1-214ENST00000578112 ROBO2Q9HCK4 1378 aa16.93■□□□□ 0.3
SMARCE1-214ENST00000578112 LRPPRCP42704 1394 aaKnown RBP16.91■□□□□ 0.3
SMARCE1-214ENST00000578112 KIF1AQ12756 1690 aa16.9■□□□□ 0.3
SMARCE1-214ENST00000578112 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
SMARCE1-214ENST00000578112 NUTM2BA6NNL0 878 aaPredicted RBP16.89■□□□□ 0.3
SMARCE1-214ENST00000578112 NUTM2EB1AL46 878 aaPredicted RBP16.89■□□□□ 0.3
SMARCE1-214ENST00000578112 NUTM2AQ8IVF1 878 aaPredicted RBP16.89■□□□□ 0.3
SMARCE1-214ENST00000578112 MARF1Q9Y4F3 1742 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-214ENST00000578112 SLC4A1APQ9BWU0 796 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-214ENST00000578112 RGS12O14924 1447 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms