RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 AGLP35573 1532 aa38.06■■■■□ 3.68
LIMD2-203ENST00000578067 SYNMO15061 1565 aa38.05■■■■□ 3.68
LIMD2-203ENST00000578067 PIK3C2BO00750 1634 aa38.04■■■■□ 3.68
LIMD2-203ENST00000578067 TMF1P82094 1093 aa38.04■■■■□ 3.68
LIMD2-203ENST00000578067 DISP3Q9P2K9 1392 aa38.04■■■■□ 3.68
LIMD2-203ENST00000578067 RPGRIP1LQ68CZ1 1315 aa38.02■■■■□ 3.68
LIMD2-203ENST00000578067 CCDC184Q52MB2 194 aa38■■■■□ 3.67
LIMD2-203ENST00000578067 CFAP70Q5T0N1 1121 aa38■■■■□ 3.67
LIMD2-203ENST00000578067 PPLO60437 1756 aa37.98■■■■□ 3.67
LIMD2-203ENST00000578067 PPP6R1Q9UPN7 881 aa37.97■■■■□ 3.67
LIMD2-203ENST00000578067 EIF3AQ14152 1382 aaKnown RBP37.96■■■■□ 3.67
LIMD2-203ENST00000578067 MRS2Q9HD23 443 aa37.95■■■■□ 3.67
LIMD2-203ENST00000578067 SLC52A1Q9NWF4 448 aa37.94■■■■□ 3.66
LIMD2-203ENST00000578067 ARHGEF40Q8TER5 1519 aa37.92■■■■□ 3.66
LIMD2-203ENST00000578067 PREX1Q8TCU6 1659 aa37.92■■■■□ 3.66
LIMD2-203ENST00000578067 IDI1Q13907 227 aa37.9■■■■□ 3.66
LIMD2-203ENST00000578067 PIK3C2GO75747 1445 aa37.89■■■■□ 3.66
LIMD2-203ENST00000578067 KTN1Q86UP2 1357 aaKnown RBP37.87■■■■□ 3.65
LIMD2-203ENST00000578067 SETBP1Q9Y6X0 1596 aa37.87■■■■□ 3.65
LIMD2-203ENST00000578067 CNGB1Q14028 1251 aaPredicted RBP37.85■■■■□ 3.65
LIMD2-203ENST00000578067 CDCA8Q53HL2 280 aa37.84■■■■□ 3.65
LIMD2-203ENST00000578067 C14orf93Q9H972 538 aaKnown RBP37.84■■■■□ 3.65
LIMD2-203ENST00000578067 NEXMIFQ5QGS0 1516 aa37.82■■■■□ 3.65
LIMD2-203ENST00000578067 VGFO15240 615 aaPredicted RBP37.81■■■■□ 3.64
LIMD2-203ENST00000578067 PER1O15534 1290 aaPredicted RBP37.81■■■■□ 3.64
LIMD2-203ENST00000578067 HNRNPUQ00839 825 aaKnown RBP eCLIP37.81■■■■□ 3.64
LIMD2-203ENST00000578067 SLC24A1O60721 1099 aa37.8■■■■□ 3.64
LIMD2-203ENST00000578067 RALBP1Q15311 655 aa37.8■■■■□ 3.64
LIMD2-203ENST00000578067 ERVK-7P63135 1459 aa37.8■■■■□ 3.64
LIMD2-203ENST00000578067 FBXO31Q5XUX0 539 aaPredicted RBP37.78■■■■□ 3.64
LIMD2-203ENST00000578067 FAM9BQ8IZU0 186 aa37.78■■■■□ 3.64
LIMD2-203ENST00000578067 CLTCQ00610 1675 aaKnown RBP37.78■■■■□ 3.64
LIMD2-203ENST00000578067 PANK3Q9H999 370 aa37.77■■■■□ 3.64
LIMD2-203ENST00000578067 TMEM131LA2VDJ0 1609 aa37.75■■■■□ 3.63
LIMD2-203ENST00000578067 MLECQ14165 292 aa37.73■■■■□ 3.63
LIMD2-203ENST00000578067 ZFYVE9O95405 1425 aa37.73■■■■□ 3.63
LIMD2-203ENST00000578067 MYO3AQ8NEV4 1616 aa37.73■■■■□ 3.63
LIMD2-203ENST00000578067 ADGRB1O14514 1584 aa37.73■■■■□ 3.63
LIMD2-203ENST00000578067 MYBBP1AQ9BQG0 1328 aaKnown RBP37.72■■■■□ 3.63
LIMD2-203ENST00000578067 PARD3Q8TEW0 1356 aa37.69■■■■□ 3.62
LIMD2-203ENST00000578067 NUTM2DQ5VT03 806 aaPredicted RBP37.68■■■■□ 3.62
LIMD2-203ENST00000578067 SBNO2Q9Y2G9 1366 aa37.68■■■■□ 3.62
LIMD2-203ENST00000578067 MYO5BQ9ULV0 1848 aa37.66■■■■□ 3.62
LIMD2-203ENST00000578067 SPATA31D1Q6ZQQ2 1576 aa37.66■■■■□ 3.62
LIMD2-203ENST00000578067 BRD4O60885 1362 aaPredicted RBP37.65■■■■□ 3.62
LIMD2-203ENST00000578067 TMC1Q8TDI8 760 aa37.65■■■■□ 3.62
LIMD2-203ENST00000578067 CENPJQ9HC77 1338 aaPredicted RBP37.64■■■■□ 3.62
LIMD2-203ENST00000578067 KDM5AP29375 1690 aaKnown RBP37.64■■■■□ 3.62
LIMD2-203ENST00000578067 TMEM132EQ6IEE7 984 aa37.63■■■■□ 3.61
LIMD2-203ENST00000578067 TRAK1Q9UPV9 953 aa37.63■■■■□ 3.61
LIMD2-203ENST00000578067 ESF1Q9H501 851 aaKnown RBP37.6■■■■□ 3.61
LIMD2-203ENST00000578067 MYOM1P52179 1685 aa37.58■■■■□ 3.61
LIMD2-203ENST00000578067 PNISRQ8TF01 805 aaKnown RBP37.58■■■■□ 3.61
LIMD2-203ENST00000578067 STAG3Q9UJ98 1225 aa37.57■■■■□ 3.6
LIMD2-203ENST00000578067 CC2D1BQ5T0F9 858 aaKnown RBP37.55■■■■□ 3.6
LIMD2-203ENST00000578067 NLRP13Q86W25 1043 aa37.55■■■■□ 3.6
LIMD2-203ENST00000578067 ZMYM3Q14202 1370 aa37.54■■■■□ 3.6
LIMD2-203ENST00000578067 KNSTRNQ9Y448 316 aa37.54■■■■□ 3.6
LIMD2-203ENST00000578067 QRICH2Q9H0J4 1663 aa37.52■■■■□ 3.6
LIMD2-203ENST00000578067 ZBED9Q6R2W3 1325 aa37.52■■■■□ 3.6
LIMD2-203ENST00000578067 A2ML1A8K2U0 1454 aa37.49■■■■□ 3.59
LIMD2-203ENST00000578067 ARHGEF28Q8N1W1 1705 aaKnown RBP37.45■■■■□ 3.59
LIMD2-203ENST00000578067 LRPPRCP42704 1394 aaKnown RBP37.45■■■■□ 3.59
LIMD2-203ENST00000578067 AMER1Q5JTC6 1135 aaPredicted RBP37.44■■■■□ 3.58
LIMD2-203ENST00000578067 ASXL1Q8IXJ9 1541 aa37.43■■■■□ 3.58
LIMD2-203ENST00000578067 SUPT16HQ9Y5B9 1047 aaKnown RBP37.43■■■■□ 3.58
LIMD2-203ENST00000578067 NPC1L1Q9UHC9 1359 aa37.4■■■■□ 3.58
LIMD2-203ENST00000578067 TRHP20396 242 aaPredicted RBP37.39■■■■□ 3.58
LIMD2-203ENST00000578067 RIMS2Q9UQ26 1411 aa37.38■■■■□ 3.58
LIMD2-203ENST00000578067 ALKQ9UM73 1620 aa37.37■■■■□ 3.57
LIMD2-203ENST00000578067 SENP3Q9H4L4 574 aaPredicted RBP37.36■■■■□ 3.57
LIMD2-203ENST00000578067 PUS7Q96PZ0 661 aaKnown RBP37.34■■■■□ 3.57
LIMD2-203ENST00000578067 TNRQ92752 1358 aa37.34■■■■□ 3.57
LIMD2-203ENST00000578067 STK26Q9P289 416 aa37.33■■■■□ 3.57
LIMD2-203ENST00000578067 EVC2Q86UK5 1308 aa37.33■■■■□ 3.57
LIMD2-203ENST00000578067 YTHDC2Q9H6S0 1430 aaKnown RBP37.32■■■■□ 3.57
LIMD2-203ENST00000578067 CARD14Q9BXL6 1004 aa37.29■■■■□ 3.56
LIMD2-203ENST00000578067 TULP4Q9NRJ4 1543 aa37.28■■■■□ 3.56
LIMD2-203ENST00000578067 NEFLP07196 543 aa37.28■■■■□ 3.56
LIMD2-203ENST00000578067 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.28■■■■□ 3.56
LIMD2-203ENST00000578067 PTPRMP28827 1452 aa37.28■■■■□ 3.56
LIMD2-203ENST00000578067 PPP2R1AP30153 589 aa37.27■■■■□ 3.56
LIMD2-203ENST00000578067 FKBP8Q14318 412 aa37.25■■■■□ 3.55
LIMD2-203ENST00000578067 SLC12A5Q9H2X9 1139 aa37.22■■■■□ 3.55
LIMD2-203ENST00000578067 SAFB2Q14151 953 aaKnown RBP eCLIP37.21■■■■□ 3.55
LIMD2-203ENST00000578067 INSRP06213 1382 aa37.21■■■■□ 3.55
LIMD2-203ENST00000578067 HDGFP51858 240 aaKnown RBP37.2■■■■□ 3.55
LIMD2-203ENST00000578067 PRAM1Q96QH2 718 aa37.2■■■■□ 3.55
LIMD2-203ENST00000578067 POGKQ9P215 609 aa37.19■■■■□ 3.54
LIMD2-203ENST00000578067 SETD1AO15047 1707 aaKnown RBP37.17■■■■□ 3.54
LIMD2-203ENST00000578067 NSD3Q9BZ95 1437 aa37.15■■■■□ 3.54
LIMD2-203ENST00000578067 UBR1Q8IWV7 1749 aa37.15■■■■□ 3.54
LIMD2-203ENST00000578067 CABP2Q9NPB3 220 aa37.14■■■■□ 3.54
LIMD2-203ENST00000578067 DLC1Q96QB1 1528 aa37.13■■■■□ 3.53
LIMD2-203ENST00000578067 NRXN3Q9Y4C0 1643 aa37.13■■■■□ 3.53
LIMD2-203ENST00000578067 SMG6Q86US8 1419 aaKnown RBP37.13■■■■□ 3.53
LIMD2-203ENST00000578067 NLRP1Q9C000 1473 aa37.12■■■■□ 3.53
LIMD2-203ENST00000578067 TMEM2Q9UHN6 1383 aa37.11■■■■□ 3.53
LIMD2-203ENST00000578067 MINK1Q8N4C8 1332 aaPredicted RBP37.1■■■■□ 3.53
LIMD2-203ENST00000578067 CEBPAP49715 358 aaPredicted RBP37.09■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms