RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 SHPRHQ149N8 1683 aa22.48■■□□□ 1.19
PPP4R1-206ENST00000577779 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
PPP4R1-206ENST00000577779 ADGRB3O60242 1522 aa22.47■■□□□ 1.19
PPP4R1-206ENST00000577779 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
PPP4R1-206ENST00000577779 CHD2O14647 1828 aaKnown RBP22.46■■□□□ 1.19
PPP4R1-206ENST00000577779 RRP7BPQ9NSQ0 103 aa22.46■■□□□ 1.19
PPP4R1-206ENST00000577779 C14orf37Q86TY3 774 aa22.45■■□□□ 1.18
PPP4R1-206ENST00000577779 AHDC1Q5TGY3 1603 aaPredicted RBP22.45■■□□□ 1.18
PPP4R1-206ENST00000577779 LMTK2Q8IWU2 1503 aa22.42■■□□□ 1.18
PPP4R1-206ENST00000577779 NCOA3Q9Y6Q9 1424 aa22.41■■□□□ 1.18
PPP4R1-206ENST00000577779 NUTM2BA6NNL0 878 aaPredicted RBP22.41■■□□□ 1.18
PPP4R1-206ENST00000577779 NUTM2EB1AL46 878 aaPredicted RBP22.41■■□□□ 1.18
PPP4R1-206ENST00000577779 NUTM2AQ8IVF1 878 aaPredicted RBP22.41■■□□□ 1.18
PPP4R1-206ENST00000577779 NOS1P29475 1434 aa22.4■■□□□ 1.18
PPP4R1-206ENST00000577779 PLEKHG1Q9ULL1 1385 aa22.4■■□□□ 1.18
PPP4R1-206ENST00000577779 CROCC2H7BZ55 1655 aa22.39■■□□□ 1.18
PPP4R1-206ENST00000577779 AFF2P51816 1311 aa22.39■■□□□ 1.18
PPP4R1-206ENST00000577779 PPP1R15AO75807 674 aaPredicted RBP22.39■■□□□ 1.17
PPP4R1-206ENST00000577779 ATF3P18847 181 aa22.39■■□□□ 1.17
PPP4R1-206ENST00000577779 CADPS2Q86UW7 1296 aa22.39■■□□□ 1.17
PPP4R1-206ENST00000577779 SLC52A1Q9NWF4 448 aa22.39■■□□□ 1.17
PPP4R1-206ENST00000577779 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.37■■□□□ 1.17
PPP4R1-206ENST00000577779 ZFYVE9O95405 1425 aa22.37■■□□□ 1.17
PPP4R1-206ENST00000577779 C19orf44Q9H6X5 657 aa22.36■■□□□ 1.17
PPP4R1-206ENST00000577779 ABCC5O15440 1437 aa22.36■■□□□ 1.17
PPP4R1-206ENST00000577779 DIP2AQ14689 1571 aa22.35■■□□□ 1.17
PPP4R1-206ENST00000577779 RGS12O14924 1447 aa22.34■■□□□ 1.17
PPP4R1-206ENST00000577779 RIMS2Q9UQ26 1411 aa22.34■■□□□ 1.17
PPP4R1-206ENST00000577779 HDGFP51858 240 aaKnown RBP22.34■■□□□ 1.17
PPP4R1-206ENST00000577779 TBX22Q9Y458 520 aa22.34■■□□□ 1.17
PPP4R1-206ENST00000577779 MYO5BQ9ULV0 1848 aa22.34■■□□□ 1.17
PPP4R1-206ENST00000577779 KANK4Q5T7N3 995 aaPredicted RBP22.33■■□□□ 1.17
PPP4R1-206ENST00000577779 BRINP3Q76B58 766 aa22.32■■□□□ 1.16
PPP4R1-206ENST00000577779 NUTM2DQ5VT03 806 aaPredicted RBP22.31■■□□□ 1.16
PPP4R1-206ENST00000577779 RBM6P78332 1123 aaKnown RBP22.3■■□□□ 1.16
PPP4R1-206ENST00000577779 QTRT2Q9H974 415 aaKnown RBP22.3■■□□□ 1.16
PPP4R1-206ENST00000577779 GCC2Q8IWJ2 1684 aa22.3■■□□□ 1.16
PPP4R1-206ENST00000577779 DAPK1P53355 1430 aa22.29■■□□□ 1.16
PPP4R1-206ENST00000577779 EP400Q96L91 3159 aa22.29■■□□□ 1.16
PPP4R1-206ENST00000577779 C8orf37Q96NL8 207 aa22.28■■□□□ 1.16
PPP4R1-206ENST00000577779 PTPN23Q9H3S7 1636 aa22.27■■□□□ 1.16
PPP4R1-206ENST00000577779 ANKRD30AQ9BXX3 1397 aa22.26■■□□□ 1.15
PPP4R1-206ENST00000577779 VPS8Q8N3P4 1428 aa22.26■■□□□ 1.15
PPP4R1-206ENST00000577779 SETD5Q9C0A6 1442 aa22.26■■□□□ 1.15
PPP4R1-206ENST00000577779 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.26■■□□□ 1.15
PPP4R1-206ENST00000577779 CHIC2Q9UKJ5 165 aa22.26■■□□□ 1.15
PPP4R1-206ENST00000577779 ADAMTS13Q76LX8 1427 aa22.25■■□□□ 1.15
PPP4R1-206ENST00000577779 TMEM131LA2VDJ0 1609 aa22.25■■□□□ 1.15
PPP4R1-206ENST00000577779 RPRD2Q5VT52 1461 aaKnown RBP22.25■■□□□ 1.15
PPP4R1-206ENST00000577779 ASXL1Q8IXJ9 1541 aa22.25■■□□□ 1.15
PPP4R1-206ENST00000577779 PIK3R4Q99570 1358 aa22.25■■□□□ 1.15
PPP4R1-206ENST00000577779 ZRANB1Q9UGI0 708 aa22.23■■□□□ 1.15
PPP4R1-206ENST00000577779 ATAD2Q6PL18 1390 aa22.23■■□□□ 1.15
PPP4R1-206ENST00000577779 CHGAP10645 457 aaKnown RBP22.22■■□□□ 1.15
PPP4R1-206ENST00000577779 LRRC59Q96AG4 307 aaKnown RBP22.22■■□□□ 1.15
PPP4R1-206ENST00000577779 NHSL1Q5SYE7 1610 aa22.21■■□□□ 1.15
PPP4R1-206ENST00000577779 NGLY1Q96IV0 654 aa22.21■■□□□ 1.15
PPP4R1-206ENST00000577779 DCCP43146 1447 aa22.21■■□□□ 1.15
PPP4R1-206ENST00000577779 AMOTL2Q9Y2J4 779 aa22.2■■□□□ 1.14
PPP4R1-206ENST00000577779 TRPM2O94759 1503 aa22.19■■□□□ 1.14
PPP4R1-206ENST00000577779 PNPLA6Q8IY17 1366 aa22.17■■□□□ 1.14
PPP4R1-206ENST00000577779 MST1RQ04912 1400 aa22.16■■□□□ 1.14
PPP4R1-206ENST00000577779 PTPRUQ92729 1446 aa22.16■■□□□ 1.14
PPP4R1-206ENST00000577779 ADAMTS2O95450 1211 aa22.15■■□□□ 1.14
PPP4R1-206ENST00000577779 SETBP1Q9Y6X0 1596 aa22.15■■□□□ 1.14
PPP4R1-206ENST00000577779 DDX17Q92841 729 aaKnown RBP22.13■■□□□ 1.13
PPP4R1-206ENST00000577779 UNC13BO14795 1591 aa22.1■■□□□ 1.13
PPP4R1-206ENST00000577779 ANKRD50Q9ULJ7 1429 aa22.09■■□□□ 1.13
PPP4R1-206ENST00000577779 USP21Q9UK80 565 aa22.09■■□□□ 1.13
PPP4R1-206ENST00000577779 ADGRL2O95490 1459 aa22.09■■□□□ 1.13
PPP4R1-206ENST00000577779 XRN1Q8IZH2 1706 aaKnown RBP22.09■■□□□ 1.13
PPP4R1-206ENST00000577779 TRPC5Q9UL62 973 aaPredicted RBP22.08■■□□□ 1.13
PPP4R1-206ENST00000577779 CCDC125Q86Z20 511 aa22.05■■□□□ 1.12
PPP4R1-206ENST00000577779 ADGRL3Q9HAR2 1447 aa22.04■■□□□ 1.12
PPP4R1-206ENST00000577779 E9PCH4 1651 aa22.03■■□□□ 1.12
PPP4R1-206ENST00000577779 ATRNO75882 1429 aa22.02■■□□□ 1.12
PPP4R1-206ENST00000577779 NRXN3Q9Y4C0 1643 aa22.02■■□□□ 1.11
PPP4R1-206ENST00000577779 APLP2Q06481 763 aa22.01■■□□□ 1.11
PPP4R1-206ENST00000577779 FNBP4Q8N3X1 1017 aaPredicted RBP22.01■■□□□ 1.11
PPP4R1-206ENST00000577779 PTCH1Q13635 1447 aa22■■□□□ 1.11
PPP4R1-206ENST00000577779 NALCNQ8IZF0 1738 aa22■■□□□ 1.11
PPP4R1-206ENST00000577779 METP08581 1390 aa21.99■■□□□ 1.11
PPP4R1-206ENST00000577779 C1orf167Q5SNV9 1468 aa21.97■■□□□ 1.11
PPP4R1-206ENST00000577779 LAMC1P11047 1609 aa21.97■■□□□ 1.11
PPP4R1-206ENST00000577779 SOS2Q07890 1332 aaPredicted RBP21.96■■□□□ 1.11
PPP4R1-206ENST00000577779 FAM50AQ14320 339 aaKnown RBP21.94■■□□□ 1.1
PPP4R1-206ENST00000577779 IQGAP3Q86VI3 1631 aa21.92■■□□□ 1.1
PPP4R1-206ENST00000577779 ZNF326Q5BKZ1 582 aaKnown RBP21.92■■□□□ 1.1
PPP4R1-206ENST00000577779 ORAI2Q96SN7 254 aa21.92■■□□□ 1.1
PPP4R1-206ENST00000577779 COL22A1Q8NFW1 1626 aaPredicted RBP21.91■■□□□ 1.1
PPP4R1-206ENST00000577779 LOC105371045A0A1W2PR82 267 aa21.91■■□□□ 1.1
PPP4R1-206ENST00000577779 BCL9LQ86UU0 1499 aa21.9■■□□□ 1.1
PPP4R1-206ENST00000577779 BLMP54132 1417 aaPredicted RBP21.89■■□□□ 1.1
PPP4R1-206ENST00000577779 ADRA2BP18089 450 aa21.89■■□□□ 1.09
PPP4R1-206ENST00000577779 GJD4Q96KN9 370 aaPredicted RBP21.89■■□□□ 1.09
PPP4R1-206ENST00000577779 MYOM2P54296 1465 aa21.87■■□□□ 1.09
PPP4R1-206ENST00000577779 LRP5O75197 1615 aa21.87■■□□□ 1.09
PPP4R1-206ENST00000577779 MARF1Q9Y4F3 1742 aaKnown RBP21.86■■□□□ 1.09
PPP4R1-206ENST00000577779 DEFB132Q7Z7B7 95 aa21.85■■□□□ 1.09
PPP4R1-206ENST00000577779 NUP155O75694 1391 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms