RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 PRR20EP86478 221 aa10.08□□□□□ -0.8
TRAPPC8-203ENST00000577474 PRR20CP86479 221 aa10.08□□□□□ -0.8
TRAPPC8-203ENST00000577474 PRR20DP86480 221 aa10.08□□□□□ -0.8
TRAPPC8-203ENST00000577474 PRR20BP86481 221 aa10.08□□□□□ -0.8
TRAPPC8-203ENST00000577474 PRR20AP86496 221 aa10.08□□□□□ -0.8
TRAPPC8-203ENST00000577474 ZNF598Q86UK7 904 aaKnown RBP10.08□□□□□ -0.8
TRAPPC8-203ENST00000577474 NPDC1Q9NQX5 325 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC8-203ENST00000577474 ARIH1Q9Y4X5 557 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC8-203ENST00000577474 PCDHB3Q9Y5E6 796 aa10.07□□□□□ -0.8
TRAPPC8-203ENST00000577474 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
TRAPPC8-203ENST00000577474 SPRYD3Q8NCJ5 442 aa10.06□□□□□ -0.8
TRAPPC8-203ENST00000577474 LCE2AQ5TA79 106 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC8-203ENST00000577474 BLOC1S3Q6QNY0 202 aa10.05□□□□□ -0.8
TRAPPC8-203ENST00000577474 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
TRAPPC8-203ENST00000577474 EYA1Q99502 592 aa10.05□□□□□ -0.8
TRAPPC8-203ENST00000577474 PPEF1O14829 653 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC8-203ENST00000577474 E2F4Q16254 413 aa10.04□□□□□ -0.8
TRAPPC8-203ENST00000577474 LIAT1Q6ZQX7 453 aa10.04□□□□□ -0.8
TRAPPC8-203ENST00000577474 TREML4Q6UXN2 200 aa10.03□□□□□ -0.8
TRAPPC8-203ENST00000577474 ANKLE1Q8NAG6 615 aa10.03□□□□□ -0.8
TRAPPC8-203ENST00000577474 PRR14Q9BWN1 585 aa10.03□□□□□ -0.8
TRAPPC8-203ENST00000577474 FAM187AA6NFU0 413 aa10.02□□□□□ -0.81
TRAPPC8-203ENST00000577474 TLL1O43897 1013 aa10.02□□□□□ -0.81
TRAPPC8-203ENST00000577474 GDF9O60383 454 aa10.02□□□□□ -0.81
TRAPPC8-203ENST00000577474 SLC4A3P48751 1232 aa10.02□□□□□ -0.81
TRAPPC8-203ENST00000577474 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
TRAPPC8-203ENST00000577474 TNFRSF10AO00220 468 aa10□□□□□ -0.81
TRAPPC8-203ENST00000577474 S1PR4O95977 384 aa9.99□□□□□ -0.81
TRAPPC8-203ENST00000577474 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
TRAPPC8-203ENST00000577474 ST8SIA5O15466 376 aa9.98□□□□□ -0.81
TRAPPC8-203ENST00000577474 AAASQ9NRG9 546 aa9.98□□□□□ -0.81
TRAPPC8-203ENST00000577474 ACTN4O43707 911 aaKnown RBP9.93□□□□□ -0.82
TRAPPC8-203ENST00000577474 PLA2G2CQ5R387 149 aa9.93□□□□□ -0.82
TRAPPC8-203ENST00000577474 DACH1Q9UI36 760 aa9.91□□□□□ -0.82
TRAPPC8-203ENST00000577474 ADH1BP00325 375 aa9.9□□□□□ -0.82
TRAPPC8-203ENST00000577474 PRKCSHP14314 528 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC8-203ENST00000577474 DNAJB2P25686 324 aa9.9□□□□□ -0.82
TRAPPC8-203ENST00000577474 TMEM134Q9H6X4 195 aa9.9□□□□□ -0.82
TRAPPC8-203ENST00000577474 WDR70Q9NW82 654 aa9.9□□□□□ -0.82
TRAPPC8-203ENST00000577474 PKD2L1Q9P0L9 805 aa9.9□□□□□ -0.82
TRAPPC8-203ENST00000577474 KMT5BQ4FZB7 885 aa9.89□□□□□ -0.83
TRAPPC8-203ENST00000577474 TSHZ2Q9NRE2 1034 aa9.89□□□□□ -0.83
TRAPPC8-203ENST00000577474 TPRNQ4KMQ1 711 aa9.88□□□□□ -0.83
TRAPPC8-203ENST00000577474 SLC6A16Q9GZN6 736 aa9.88□□□□□ -0.83
TRAPPC8-203ENST00000577474 CFHP08603 1231 aa9.87□□□□□ -0.83
TRAPPC8-203ENST00000577474 CRIPAKQ8N1N5 446 aa9.87□□□□□ -0.83
TRAPPC8-203ENST00000577474 WFS1O76024 890 aa9.86□□□□□ -0.83
TRAPPC8-203ENST00000577474 FOXC1Q12948 553 aa9.86□□□□□ -0.83
TRAPPC8-203ENST00000577474 NR1I2O75469 434 aa9.85□□□□□ -0.83
TRAPPC8-203ENST00000577474 SLC10A3P09131 477 aa9.85□□□□□ -0.83
TRAPPC8-203ENST00000577474 RBM46Q8TBY0 533 aaKnown RBP9.85□□□□□ -0.83
TRAPPC8-203ENST00000577474 AVPP01185 164 aa9.84□□□□□ -0.83
TRAPPC8-203ENST00000577474 LMOD2Q6P5Q4 547 aa9.84□□□□□ -0.83
TRAPPC8-203ENST00000577474 GMPR2Q9P2T1 348 aaKnown RBP9.84□□□□□ -0.83
TRAPPC8-203ENST00000577474 ADGRG1Q9Y653 693 aa9.84□□□□□ -0.83
TRAPPC8-203ENST00000577474 RCCD1A6NED2 376 aa9.83□□□□□ -0.84
TRAPPC8-203ENST00000577474 PTGDRQ13258 359 aa9.83□□□□□ -0.84
TRAPPC8-203ENST00000577474 SCUBE3Q8IX30 993 aa9.83□□□□□ -0.84
TRAPPC8-203ENST00000577474 NFX1Q12986 1120 aaKnown RBP9.82□□□□□ -0.84
TRAPPC8-203ENST00000577474 TOR4AQ9NXH8 423 aa9.82□□□□□ -0.84
TRAPPC8-203ENST00000577474 C11orf95C9JLR9 678 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC8-203ENST00000577474 STK17AQ9UEE5 414 aa9.81□□□□□ -0.84
TRAPPC8-203ENST00000577474 AXIN1O15169 862 aa9.8□□□□□ -0.84
TRAPPC8-203ENST00000577474 FAM161AQ3B820 660 aa9.8□□□□□ -0.84
TRAPPC8-203ENST00000577474 WIPF1O43516 503 aa9.79□□□□□ -0.84
TRAPPC8-203ENST00000577474 MLLT3P42568 568 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC8-203ENST00000577474 SPSB2Q99619 263 aa9.79□□□□□ -0.84
TRAPPC8-203ENST00000577474 RPIAP49247 311 aa9.77□□□□□ -0.85
TRAPPC8-203ENST00000577474 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC8-203ENST00000577474 PUS10Q3MIT2 529 aaKnown RBP9.77□□□□□ -0.85
TRAPPC8-203ENST00000577474 CTC1Q2NKJ3 1217 aa9.76□□□□□ -0.85
TRAPPC8-203ENST00000577474 CYP4X1Q8N118 509 aa9.76□□□□□ -0.85
TRAPPC8-203ENST00000577474 INSM1Q01101 510 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC8-203ENST00000577474 CD2BP2O95400 341 aaKnown RBP9.74□□□□□ -0.85
TRAPPC8-203ENST00000577474 LCE2CQ5TA81 110 aa9.74□□□□□ -0.85
TRAPPC8-203ENST00000577474 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.73□□□□□ -0.85
TRAPPC8-203ENST00000577474 FCF1Q9Y324 198 aaKnown RBP9.72□□□□□ -0.85
TRAPPC8-203ENST00000577474 THAP11Q96EK4 314 aa9.69□□□□□ -0.86
TRAPPC8-203ENST00000577474 NUTM2FA1L443 756 aa9.68□□□□□ -0.86
TRAPPC8-203ENST00000577474 SNRPBP14678 240 aaKnown RBP9.68□□□□□ -0.86
TRAPPC8-203ENST00000577474 FAM160A2Q8N612 972 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC8-203ENST00000577474 PXYLP1Q8TE99 480 aa9.68□□□□□ -0.86
TRAPPC8-203ENST00000577474 TTC24A2A3L6 582 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC8-203ENST00000577474 MORN1Q5T089 497 aa9.67□□□□□ -0.86
TRAPPC8-203ENST00000577474 RSPH4AQ5TD94 716 aa9.67□□□□□ -0.86
TRAPPC8-203ENST00000577474 ARHGEF1Q92888 912 aaKnown RBP9.67□□□□□ -0.86
TRAPPC8-203ENST00000577474 ATP13A2Q9NQ11 1180 aa9.67□□□□□ -0.86
TRAPPC8-203ENST00000577474 TERTO14746 1132 aaKnown RBP9.66□□□□□ -0.86
TRAPPC8-203ENST00000577474 SMPD1P17405 629 aa9.65□□□□□ -0.86
TRAPPC8-203ENST00000577474 OATP04181 439 aa9.64□□□□□ -0.87
TRAPPC8-203ENST00000577474 SNIP1Q8TAD8 396 aaKnown RBP9.63□□□□□ -0.87
TRAPPC8-203ENST00000577474 FCHSD2O94868 740 aa9.62□□□□□ -0.87
TRAPPC8-203ENST00000577474 FMNL1O95466 1100 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC8-203ENST00000577474 FUT2Q10981 343 aa9.62□□□□□ -0.87
TRAPPC8-203ENST00000577474 TRIM47Q96LD4 638 aa9.62□□□□□ -0.87
TRAPPC8-203ENST00000577474 PRDM9Q9NQV7 894 aa9.62□□□□□ -0.87
TRAPPC8-203ENST00000577474 SLC27A5Q9Y2P5 690 aa9.62□□□□□ -0.87
TRAPPC8-203ENST00000577474 WNT7AO00755 349 aa9.61□□□□□ -0.87
TRAPPC8-203ENST00000577474 ZBTB24O43167 697 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC8-203ENST00000577474 METTL3Q86U44 580 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms