RNA–Protein interactions for RNA: ENST00000577198.5

KRT18P55-201, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 1 (best) BASIC

Gene KRT18P55, Length 1,950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-201ENST00000577198 ADGRF5Q8IZF2 1346 aa29.35■■■□□ 2.29
KRT18P55-201ENST00000577198 REREQ9P2R6 1566 aa29.32■■■□□ 2.28
KRT18P55-201ENST00000577198 PPLO60437 1756 aa29.32■■■□□ 2.28
KRT18P55-201ENST00000577198 SCAF11Q99590 1463 aaKnown RBP29.31■■■□□ 2.28
KRT18P55-201ENST00000577198 CFAP70Q5T0N1 1121 aa29.27■■■□□ 2.28
KRT18P55-201ENST00000577198 AGLP35573 1532 aa29.25■■■□□ 2.27
KRT18P55-201ENST00000577198 CHGAP10645 457 aaKnown RBP29.24■■■□□ 2.27
KRT18P55-201ENST00000577198 PREX1Q8TCU6 1659 aa29.23■■■□□ 2.27
KRT18P55-201ENST00000577198 MRS2Q9HD23 443 aa29.22■■■□□ 2.27
KRT18P55-201ENST00000577198 TMF1P82094 1093 aa29.22■■■□□ 2.27
KRT18P55-201ENST00000577198 PIK3C2GO75747 1445 aa29.2■■■□□ 2.26
KRT18P55-201ENST00000577198 PER1O15534 1290 aaPredicted RBP29.19■■■□□ 2.26
KRT18P55-201ENST00000577198 CNGB1Q14028 1251 aaPredicted RBP29.19■■■□□ 2.26
KRT18P55-201ENST00000577198 RPGRIP1LQ68CZ1 1315 aa29.17■■■□□ 2.26
KRT18P55-201ENST00000577198 ARHGEF40Q8TER5 1519 aa29.17■■■□□ 2.26
KRT18P55-201ENST00000577198 IDI1Q13907 227 aa29.17■■■□□ 2.26
KRT18P55-201ENST00000577198 NEXMIFQ5QGS0 1516 aa29.16■■■□□ 2.26
KRT18P55-201ENST00000577198 SETBP1Q9Y6X0 1596 aa29.16■■■□□ 2.26
KRT18P55-201ENST00000577198 HNRNPUQ00839 825 aaKnown RBP eCLIP29.14■■■□□ 2.26
KRT18P55-201ENST00000577198 MYO5BQ9ULV0 1848 aa29.14■■■□□ 2.26
KRT18P55-201ENST00000577198 EIF3AQ14152 1382 aaKnown RBP29.12■■■□□ 2.25
KRT18P55-201ENST00000577198 FAM9BQ8IZU0 186 aa29.12■■■□□ 2.25
KRT18P55-201ENST00000577198 ADGRB1O14514 1584 aa29.11■■■□□ 2.25
KRT18P55-201ENST00000577198 CLTCQ00610 1675 aaKnown RBP29.11■■■□□ 2.25
KRT18P55-201ENST00000577198 MYO3AQ8NEV4 1616 aa29.11■■■□□ 2.25
KRT18P55-201ENST00000577198 C14orf93Q9H972 538 aaKnown RBP29.11■■■□□ 2.25
KRT18P55-201ENST00000577198 SLC52A1Q9NWF4 448 aa29.11■■■□□ 2.25
KRT18P55-201ENST00000577198 TMEM131LA2VDJ0 1609 aa29.1■■■□□ 2.25
KRT18P55-201ENST00000577198 FBXO31Q5XUX0 539 aaPredicted RBP29.1■■■□□ 2.25
KRT18P55-201ENST00000577198 KTN1Q86UP2 1357 aaKnown RBP29.09■■■□□ 2.25
KRT18P55-201ENST00000577198 ERVK-7P63135 1459 aa29.09■■■□□ 2.25
KRT18P55-201ENST00000577198 PANK3Q9H999 370 aa29.09■■■□□ 2.25
KRT18P55-201ENST00000577198 PPP6R1Q9UPN7 881 aa29.08■■■□□ 2.25
KRT18P55-201ENST00000577198 MYOM1P52179 1685 aa29.07■■■□□ 2.24
KRT18P55-201ENST00000577198 PARD3Q8TEW0 1356 aa29.07■■■□□ 2.24
KRT18P55-201ENST00000577198 RALBP1Q15311 655 aa29.06■■■□□ 2.24
KRT18P55-201ENST00000577198 NUTM2DQ5VT03 806 aaPredicted RBP29.04■■■□□ 2.24
KRT18P55-201ENST00000577198 MYBBP1AQ9BQG0 1328 aaKnown RBP29.03■■■□□ 2.24
KRT18P55-201ENST00000577198 ZFYVE9O95405 1425 aa29.01■■■□□ 2.24
KRT18P55-201ENST00000577198 KDM5AP29375 1690 aaKnown RBP29.01■■■□□ 2.23
KRT18P55-201ENST00000577198 VGFO15240 615 aaPredicted RBP29■■■□□ 2.23
KRT18P55-201ENST00000577198 CDCA8Q53HL2 280 aa28.99■■■□□ 2.23
KRT18P55-201ENST00000577198 TMEM132EQ6IEE7 984 aa28.99■■■□□ 2.23
KRT18P55-201ENST00000577198 PNISRQ8TF01 805 aaKnown RBP28.99■■■□□ 2.23
KRT18P55-201ENST00000577198 SBNO2Q9Y2G9 1366 aa28.99■■■□□ 2.23
KRT18P55-201ENST00000577198 SPATA31D1Q6ZQQ2 1576 aa28.99■■■□□ 2.23
KRT18P55-201ENST00000577198 MLECQ14165 292 aa28.99■■■□□ 2.23
KRT18P55-201ENST00000577198 BRD4O60885 1362 aaPredicted RBP28.99■■■□□ 2.23
KRT18P55-201ENST00000577198 TRAK1Q9UPV9 953 aa28.95■■■□□ 2.23
KRT18P55-201ENST00000577198 SUPT16HQ9Y5B9 1047 aaKnown RBP28.95■■■□□ 2.23
KRT18P55-201ENST00000577198 QRICH2Q9H0J4 1663 aa28.94■■■□□ 2.22
KRT18P55-201ENST00000577198 CENPJQ9HC77 1338 aaPredicted RBP28.94■■■□□ 2.22
KRT18P55-201ENST00000577198 TMC1Q8TDI8 760 aa28.94■■■□□ 2.22
KRT18P55-201ENST00000577198 CC2D1BQ5T0F9 858 aaKnown RBP28.93■■■□□ 2.22
KRT18P55-201ENST00000577198 ASXL1Q8IXJ9 1541 aa28.92■■■□□ 2.22
KRT18P55-201ENST00000577198 ZBED9Q6R2W3 1325 aa28.92■■■□□ 2.22
KRT18P55-201ENST00000577198 ARHGEF28Q8N1W1 1705 aaKnown RBP28.92■■■□□ 2.22
KRT18P55-201ENST00000577198 SLC24A1O60721 1099 aa28.92■■■□□ 2.22
KRT18P55-201ENST00000577198 LRPPRCP42704 1394 aaKnown RBP28.91■■■□□ 2.22
KRT18P55-201ENST00000577198 NLRP13Q86W25 1043 aa28.9■■■□□ 2.22
KRT18P55-201ENST00000577198 AMER1Q5JTC6 1135 aaPredicted RBP28.88■■■□□ 2.21
KRT18P55-201ENST00000577198 A2ML1A8K2U0 1454 aa28.86■■■□□ 2.21
KRT18P55-201ENST00000577198 ZMYM3Q14202 1370 aa28.85■■■□□ 2.21
KRT18P55-201ENST00000577198 KNSTRNQ9Y448 316 aa28.83■■■□□ 2.21
KRT18P55-201ENST00000577198 SENP3Q9H4L4 574 aaPredicted RBP28.81■■■□□ 2.2
KRT18P55-201ENST00000577198 ALKQ9UM73 1620 aa28.79■■■□□ 2.2
KRT18P55-201ENST00000577198 NPC1L1Q9UHC9 1359 aa28.78■■■□□ 2.2
KRT18P55-201ENST00000577198 TULP4Q9NRJ4 1543 aa28.77■■■□□ 2.2
KRT18P55-201ENST00000577198 CARD14Q9BXL6 1004 aa28.77■■■□□ 2.2
KRT18P55-201ENST00000577198 STAG3Q9UJ98 1225 aa28.77■■■□□ 2.2
KRT18P55-201ENST00000577198 FKBP8Q14318 412 aa28.75■■■□□ 2.19
KRT18P55-201ENST00000577198 PTPRMP28827 1452 aa28.74■■■□□ 2.19
KRT18P55-201ENST00000577198 RIMS2Q9UQ26 1411 aa28.74■■■□□ 2.19
KRT18P55-201ENST00000577198 ESF1Q9H501 851 aaKnown RBP28.74■■■□□ 2.19
KRT18P55-201ENST00000577198 SETD1AO15047 1707 aaKnown RBP28.73■■■□□ 2.19
KRT18P55-201ENST00000577198 YTHDC2Q9H6S0 1430 aaKnown RBP28.72■■■□□ 2.19
KRT18P55-201ENST00000577198 PPP2R1AP30153 589 aa28.71■■■□□ 2.19
KRT18P55-201ENST00000577198 STK26Q9P289 416 aa28.7■■■□□ 2.19
KRT18P55-201ENST00000577198 SENP3-EIF4A1A0A087X0R7 540 aa28.7■■■□□ 2.18
KRT18P55-201ENST00000577198 NRXN3Q9Y4C0 1643 aa28.68■■■□□ 2.18
KRT18P55-201ENST00000577198 SLC12A5Q9H2X9 1139 aa28.68■■■□□ 2.18
KRT18P55-201ENST00000577198 PUS7Q96PZ0 661 aaKnown RBP28.67■■■□□ 2.18
KRT18P55-201ENST00000577198 TNRQ92752 1358 aa28.67■■■□□ 2.18
KRT18P55-201ENST00000577198 EVC2Q86UK5 1308 aa28.66■■■□□ 2.18
KRT18P55-201ENST00000577198 SAFB2Q14151 953 aaKnown RBP eCLIP28.65■■■□□ 2.18
KRT18P55-201ENST00000577198 UBR1Q8IWV7 1749 aa28.63■■■□□ 2.17
KRT18P55-201ENST00000577198 SMG6Q86US8 1419 aaKnown RBP28.63■■■□□ 2.17
KRT18P55-201ENST00000577198 INSRP06213 1382 aa28.63■■■□□ 2.17
KRT18P55-201ENST00000577198 NEFLP07196 543 aa28.62■■■□□ 2.17
KRT18P55-201ENST00000577198 BLMP54132 1417 aaPredicted RBP28.62■■■□□ 2.17
KRT18P55-201ENST00000577198 TRHP20396 242 aaPredicted RBP28.62■■■□□ 2.17
KRT18P55-201ENST00000577198 PRAM1Q96QH2 718 aa28.61■■■□□ 2.17
KRT18P55-201ENST00000577198 NSD3Q9BZ95 1437 aa28.61■■■□□ 2.17
KRT18P55-201ENST00000577198 CABP2Q9NPB3 220 aa28.6■■■□□ 2.17
KRT18P55-201ENST00000577198 USP32Q8NFA0 1604 aa28.58■■■□□ 2.17
KRT18P55-201ENST00000577198 BCANQ96GW7 911 aa28.58■■■□□ 2.17
KRT18P55-201ENST00000577198 DLC1Q96QB1 1528 aa28.57■■■□□ 2.16
KRT18P55-201ENST00000577198 C3P01024 1663 aa28.56■■■□□ 2.16
KRT18P55-201ENST00000577198 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.55■■■□□ 2.16
KRT18P55-201ENST00000577198 CEBPAP49715 358 aaPredicted RBP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms