RNA–Protein interactions for RNA: ENST00000576523.1

NCBP3-206, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-206ENST00000576523 TMEM131LA2VDJ0 1609 aa13.04□□□□□ -0.32
NCBP3-206ENST00000576523 TNRQ92752 1358 aa13.04□□□□□ -0.32
NCBP3-206ENST00000576523 TRIM52Q96A61 297 aa13.03□□□□□ -0.32
NCBP3-206ENST00000576523 PTPRTO14522 1441 aa13.03□□□□□ -0.32
NCBP3-206ENST00000576523 HRCP23327 699 aa13.02□□□□□ -0.33
NCBP3-206ENST00000576523 A2ML1A8K2U0 1454 aa13.02□□□□□ -0.33
NCBP3-206ENST00000576523 IFT172Q9UG01 1749 aa13.02□□□□□ -0.33
NCBP3-206ENST00000576523 NLRP1Q9C000 1473 aa13.01□□□□□ -0.33
NCBP3-206ENST00000576523 ADGRB3O60242 1522 aa13.01□□□□□ -0.33
NCBP3-206ENST00000576523 UHRF1BP1Q6BDS2 1440 aa13□□□□□ -0.33
NCBP3-206ENST00000576523 PKD2Q13563 968 aa13□□□□□ -0.33
NCBP3-206ENST00000576523 PPLO60437 1756 aa12.99□□□□□ -0.33
NCBP3-206ENST00000576523 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
NCBP3-206ENST00000576523 MPHOSPH9Q99550 1183 aa12.99□□□□□ -0.33
NCBP3-206ENST00000576523 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
NCBP3-206ENST00000576523 GTF3C3Q9Y5Q9 886 aa12.98□□□□□ -0.33
NCBP3-206ENST00000576523 NEURL4Q96JN8 1562 aa12.98□□□□□ -0.33
NCBP3-206ENST00000576523 HOMEZQ8IX15 550 aa12.97□□□□□ -0.33
NCBP3-206ENST00000576523 HSPA2P54652 639 aa12.95□□□□□ -0.34
NCBP3-206ENST00000576523 IDI1Q13907 227 aa12.95□□□□□ -0.34
NCBP3-206ENST00000576523 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
NCBP3-206ENST00000576523 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
NCBP3-206ENST00000576523 SLIT1O75093 1534 aa12.94□□□□□ -0.34
NCBP3-206ENST00000576523 ARHGAP23Q9P227 1491 aa12.94□□□□□ -0.34
NCBP3-206ENST00000576523 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
NCBP3-206ENST00000576523 ANKRD30BQ9BXX2 1392 aa12.93□□□□□ -0.34
NCBP3-206ENST00000576523 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
NCBP3-206ENST00000576523 IQGAP1P46940 1657 aa12.92□□□□□ -0.34
NCBP3-206ENST00000576523 NEXMIFQ5QGS0 1516 aa12.92□□□□□ -0.34
NCBP3-206ENST00000576523 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
NCBP3-206ENST00000576523 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
NCBP3-206ENST00000576523 ZFYVE9O95405 1425 aa12.9□□□□□ -0.34
NCBP3-206ENST00000576523 STRCP1A6NGW2 1772 aa12.9□□□□□ -0.34
NCBP3-206ENST00000576523 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
NCBP3-206ENST00000576523 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
NCBP3-206ENST00000576523 SLC52A1Q9NWF4 448 aa12.89□□□□□ -0.35
NCBP3-206ENST00000576523 VASPP50552 380 aaPredicted RBP12.88□□□□□ -0.35
NCBP3-206ENST00000576523 CCDC144AA2RUR9 1427 aa12.88□□□□□ -0.35
NCBP3-206ENST00000576523 CHD2O14647 1828 aaKnown RBP12.86□□□□□ -0.35
NCBP3-206ENST00000576523 TMEM2Q9UHN6 1383 aa12.86□□□□□ -0.35
NCBP3-206ENST00000576523 MED14O60244 1454 aa12.85□□□□□ -0.35
NCBP3-206ENST00000576523 PROM2Q8N271 834 aa12.85□□□□□ -0.35
NCBP3-206ENST00000576523 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
NCBP3-206ENST00000576523 NCKAP5LQ9HCH0 1330 aa12.85□□□□□ -0.35
NCBP3-206ENST00000576523 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
NCBP3-206ENST00000576523 XIRP1Q702N8 1843 aaKnown RBP12.84□□□□□ -0.35
NCBP3-206ENST00000576523 LTKP29376 864 aa12.84□□□□□ -0.35
NCBP3-206ENST00000576523 THEMISQ8N1K5 641 aaPredicted RBP12.83□□□□□ -0.36
NCBP3-206ENST00000576523 SETBP1Q9Y6X0 1596 aa12.81□□□□□ -0.36
NCBP3-206ENST00000576523 CHGAP10645 457 aaKnown RBP12.81□□□□□ -0.36
NCBP3-206ENST00000576523 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
NCBP3-206ENST00000576523 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
NCBP3-206ENST00000576523 NUTM2DQ5VT03 806 aaPredicted RBP12.79□□□□□ -0.36
NCBP3-206ENST00000576523 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
NCBP3-206ENST00000576523 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
NCBP3-206ENST00000576523 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
NCBP3-206ENST00000576523 IFNLR1Q8IU57 520 aaPredicted RBP12.78□□□□□ -0.36
NCBP3-206ENST00000576523 MYOM2P54296 1465 aa12.78□□□□□ -0.36
NCBP3-206ENST00000576523 ASXL1Q8IXJ9 1541 aa12.78□□□□□ -0.36
NCBP3-206ENST00000576523 DIP2AQ14689 1571 aa12.77□□□□□ -0.36
NCBP3-206ENST00000576523 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
NCBP3-206ENST00000576523 TXNDC2Q86VQ3 553 aa12.77□□□□□ -0.37
NCBP3-206ENST00000576523 ANKLE2Q86XL3 938 aa12.77□□□□□ -0.37
NCBP3-206ENST00000576523 PLEKHG1Q9ULL1 1385 aa12.77□□□□□ -0.37
NCBP3-206ENST00000576523 NWD1Q149M9 1564 aa12.77□□□□□ -0.37
NCBP3-206ENST00000576523 LTBP4Q8N2S1 1624 aa12.77□□□□□ -0.37
NCBP3-206ENST00000576523 ALKQ9UM73 1620 aa12.77□□□□□ -0.37
NCBP3-206ENST00000576523 XRN1Q8IZH2 1706 aaKnown RBP12.76□□□□□ -0.37
NCBP3-206ENST00000576523 KIAA1210Q9ULL0 1709 aa12.76□□□□□ -0.37
NCBP3-206ENST00000576523 LAMC1P11047 1609 aa12.76□□□□□ -0.37
NCBP3-206ENST00000576523 RGL3Q3MIN7 710 aa12.75□□□□□ -0.37
NCBP3-206ENST00000576523 ZNF326Q5BKZ1 582 aaKnown RBP12.75□□□□□ -0.37
NCBP3-206ENST00000576523 PAXIP1Q6ZW49 1069 aaPredicted RBP12.75□□□□□ -0.37
NCBP3-206ENST00000576523 KNDC1Q76NI1 1749 aa12.74□□□□□ -0.37
NCBP3-206ENST00000576523 TRPM1Q7Z4N2 1603 aa12.74□□□□□ -0.37
NCBP3-206ENST00000576523 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
NCBP3-206ENST00000576523 PIK3C2GO75747 1445 aa12.73□□□□□ -0.37
NCBP3-206ENST00000576523 RPGRIP1LQ68CZ1 1315 aa12.73□□□□□ -0.37
NCBP3-206ENST00000576523 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
NCBP3-206ENST00000576523 EID1Q9Y6B2 187 aa12.72□□□□□ -0.37
NCBP3-206ENST00000576523 PTPRUQ92729 1446 aa12.71□□□□□ -0.37
NCBP3-206ENST00000576523 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.71□□□□□ -0.37
NCBP3-206ENST00000576523 NEUROD1Q13562 356 aa12.7□□□□□ -0.38
NCBP3-206ENST00000576523 ARHGEF28Q8N1W1 1705 aaKnown RBP12.7□□□□□ -0.38
NCBP3-206ENST00000576523 ADGRB1O14514 1584 aa12.69□□□□□ -0.38
NCBP3-206ENST00000576523 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
NCBP3-206ENST00000576523 MSH5O43196 834 aa12.69□□□□□ -0.38
NCBP3-206ENST00000576523 NBR1Q14596 966 aa12.69□□□□□ -0.38
NCBP3-206ENST00000576523 L3MBTL2Q969R5 705 aa12.69□□□□□ -0.38
NCBP3-206ENST00000576523 SLC26A8Q96RN1 970 aa12.69□□□□□ -0.38
NCBP3-206ENST00000576523 PPP1R15AO75807 674 aaPredicted RBP12.68□□□□□ -0.38
NCBP3-206ENST00000576523 PRAG1Q86YV5 1406 aa12.68□□□□□ -0.38
NCBP3-206ENST00000576523 NALCNQ8IZF0 1738 aa12.68□□□□□ -0.38
NCBP3-206ENST00000576523 METP08581 1390 aa12.68□□□□□ -0.38
NCBP3-206ENST00000576523 CLSPNQ9HAW4 1339 aa12.67□□□□□ -0.38
NCBP3-206ENST00000576523 DCAF11Q8TEB1 546 aa12.67□□□□□ -0.38
NCBP3-206ENST00000576523 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
NCBP3-206ENST00000576523 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
NCBP3-206ENST00000576523 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
NCBP3-206ENST00000576523 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms