RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 TMEM134Q9H6X4 195 aa8.99□□□□□ -0.97
TSR1-203ENST00000575049 TRIM66O15016 1216 aa8.98□□□□□ -0.97
TSR1-203ENST00000575049 SWT1Q5T5J6 900 aaKnown RBP8.98□□□□□ -0.97
TSR1-203ENST00000575049 KCTD12Q96CX2 325 aaKnown RBP8.98□□□□□ -0.97
TSR1-203ENST00000575049 HDGFP51858 240 aaKnown RBP8.97□□□□□ -0.97
TSR1-203ENST00000575049 MMRN1Q13201 1228 aa8.97□□□□□ -0.97
TSR1-203ENST00000575049 RNF166Q96A37 237 aaPredicted RBP8.97□□□□□ -0.97
TSR1-203ENST00000575049 LRCH3Q96II8 777 aa8.97□□□□□ -0.97
TSR1-203ENST00000575049 AMHR2Q16671 573 aa8.96□□□□□ -0.98
TSR1-203ENST00000575049 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.96□□□□□ -0.98
TSR1-203ENST00000575049 SOWAHBA6NEL2 793 aa8.95□□□□□ -0.98
TSR1-203ENST00000575049 BCAMP50895 628 aa8.95□□□□□ -0.98
TSR1-203ENST00000575049 MDM2Q00987 491 aaPredicted RBP8.95□□□□□ -0.98
TSR1-203ENST00000575049 THSD4Q6ZMP0 1018 aa8.95□□□□□ -0.98
TSR1-203ENST00000575049 CLCN1P35523 988 aa8.93□□□□□ -0.98
TSR1-203ENST00000575049 RNF40O75150 1001 aa8.92□□□□□ -0.98
TSR1-203ENST00000575049 RANGAP1P46060 587 aaPredicted RBP8.92□□□□□ -0.98
TSR1-203ENST00000575049 PDE4DQ08499 809 aa8.92□□□□□ -0.98
TSR1-203ENST00000575049 TTLL12Q14166 644 aaPredicted RBP8.92□□□□□ -0.98
TSR1-203ENST00000575049 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
TSR1-203ENST00000575049 GPCPD1Q9NPB8 672 aa8.92□□□□□ -0.98
TSR1-203ENST00000575049 SLC4A3P48751 1232 aa8.91□□□□□ -0.98
TSR1-203ENST00000575049 TMUB1Q9BVT8 246 aa8.91□□□□□ -0.98
TSR1-203ENST00000575049 REPIN1Q9BWE0 567 aaKnown RBP8.91□□□□□ -0.98
TSR1-203ENST00000575049 PODXL2Q9NZ53 605 aa8.91□□□□□ -0.98
TSR1-203ENST00000575049 HPS5Q9UPZ3 1129 aa8.91□□□□□ -0.98
TSR1-203ENST00000575049 PARP9Q8IXQ6 854 aa8.9□□□□□ -0.98
TSR1-203ENST00000575049 TSR3Q9UJK0 312 aaKnown RBP8.9□□□□□ -0.98
TSR1-203ENST00000575049 PTPN5P54829 565 aa8.89□□□□□ -0.99
TSR1-203ENST00000575049 DDX11L8A8MPP1 907 aa8.88□□□□□ -0.99
TSR1-203ENST00000575049 PPP4CP60510 307 aa8.88□□□□□ -0.99
TSR1-203ENST00000575049 GIGYF2Q6Y7W6 1299 aaKnown RBP8.88□□□□□ -0.99
TSR1-203ENST00000575049 SULF1Q8IWU6 871 aa8.88□□□□□ -0.99
TSR1-203ENST00000575049 PLSCR2Q9NRY7 297 aa8.88□□□□□ -0.99
TSR1-203ENST00000575049 WBP1LQ9NX94 342 aa8.88□□□□□ -0.99
TSR1-203ENST00000575049 SLC10A3P09131 477 aa8.87□□□□□ -0.99
TSR1-203ENST00000575049 NECTIN2Q92692 538 aa8.87□□□□□ -0.99
TSR1-203ENST00000575049 FAM217BQ9NTX9 383 aaPredicted RBP8.87□□□□□ -0.99
TSR1-203ENST00000575049 RDH13Q8NBN7 331 aa8.86□□□□□ -0.99
TSR1-203ENST00000575049 HCSTQ9UBK5 93 aa8.86□□□□□ -0.99
TSR1-203ENST00000575049 RSPH4AQ5TD94 716 aa8.85□□□□□ -0.99
TSR1-203ENST00000575049 SUPT5HO00267 1087 aaKnown RBP8.84□□□□□ -0.99
TSR1-203ENST00000575049 CD46P15529 392 aa8.84□□□□□ -0.99
TSR1-203ENST00000575049 SSTR3P32745 418 aaPredicted RBP8.84□□□□□ -0.99
TSR1-203ENST00000575049 CFHP08603 1231 aa8.83□□□□□ -1
TSR1-203ENST00000575049 NEUROD2Q15784 382 aa8.83□□□□□ -1
TSR1-203ENST00000575049 NYAP1Q6ZVC0 841 aa8.83□□□□□ -1
TSR1-203ENST00000575049 GPBP1L1Q9HC44 474 aaPredicted RBP8.83□□□□□ -1
TSR1-203ENST00000575049 MS4A1P11836 297 aa8.82□□□□□ -1
TSR1-203ENST00000575049 APLP1P51693 650 aa8.82□□□□□ -1
TSR1-203ENST00000575049 KDM4CQ9H3R0 1056 aa8.82□□□□□ -1
TSR1-203ENST00000575049 BRPF1P55201 1214 aaPredicted RBP8.81□□□□□ -1
TSR1-203ENST00000575049 KMT5BQ4FZB7 885 aa8.81□□□□□ -1
TSR1-203ENST00000575049 PRR14Q9BWN1 585 aa8.81□□□□□ -1
TSR1-203ENST00000575049 GCGRP47871 477 aa8.8□□□□□ -1
TSR1-203ENST00000575049 ACTN4O43707 911 aaKnown RBP8.78□□□□□ -1
TSR1-203ENST00000575049 BEGAINQ9BUH8 593 aa8.78□□□□□ -1
TSR1-203ENST00000575049 KDM4AO75164 1064 aa8.75□□□□□ -1.01
TSR1-203ENST00000575049 FUT2Q10981 343 aa8.75□□□□□ -1.01
TSR1-203ENST00000575049 PCDHB3Q9Y5E6 796 aa8.75□□□□□ -1.01
TSR1-203ENST00000575049 NUTM1Q86Y26 1132 aa8.74□□□□□ -1.01
TSR1-203ENST00000575049 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
TSR1-203ENST00000575049 USP46P62068 366 aa8.73□□□□□ -1.01
TSR1-203ENST00000575049 SPIRE2Q8WWL2 714 aa8.73□□□□□ -1.01
TSR1-203ENST00000575049 ATP6V1AP38606 617 aa8.72□□□□□ -1.01
TSR1-203ENST00000575049 PUS10Q3MIT2 529 aaKnown RBP8.72□□□□□ -1.01
TSR1-203ENST00000575049 BLOC1S3Q6QNY0 202 aa8.72□□□□□ -1.01
TSR1-203ENST00000575049 DDRGK1Q96HY6 314 aa8.72□□□□□ -1.01
TSR1-203ENST00000575049 MTRQ99707 1265 aa8.72□□□□□ -1.01
TSR1-203ENST00000575049 HOXA2O43364 376 aa8.71□□□□□ -1.02
TSR1-203ENST00000575049 COPS2P61201 443 aa8.71□□□□□ -1.02
TSR1-203ENST00000575049 GRIPAP1Q4V328 841 aa8.71□□□□□ -1.02
TSR1-203ENST00000575049 TJAP1Q5JTD0 557 aa8.71□□□□□ -1.02
TSR1-203ENST00000575049 TBC1D2Q9BYX2 928 aa8.71□□□□□ -1.02
TSR1-203ENST00000575049 PLEKHG3A1L390 1219 aa8.7□□□□□ -1.02
TSR1-203ENST00000575049 DIXDC1Q155Q3 683 aa8.7□□□□□ -1.02
TSR1-203ENST00000575049 MORN1Q5T089 497 aa8.7□□□□□ -1.02
TSR1-203ENST00000575049 IL21Q9HBE4 155 aa8.7□□□□□ -1.02
TSR1-203ENST00000575049 ITGBL1O95965 494 aaPredicted RBP8.69□□□□□ -1.02
TSR1-203ENST00000575049 HLA-CQ95604 372 aa8.69□□□□□ -1.02
TSR1-203ENST00000575049 NR1I2O75469 434 aa8.68□□□□□ -1.02
TSR1-203ENST00000575049 UBTFP17480 764 aaKnown RBP8.68□□□□□ -1.02
TSR1-203ENST00000575049 TRIM26Q12899 539 aaPredicted RBP8.68□□□□□ -1.02
TSR1-203ENST00000575049 IL27Q8NEV9 243 aa8.68□□□□□ -1.02
TSR1-203ENST00000575049 MOXD2PA6NHM9 499 aa8.67□□□□□ -1.02
TSR1-203ENST00000575049 MYSM1Q5VVJ2 828 aa8.67□□□□□ -1.02
TSR1-203ENST00000575049 NPM2Q86SE8 214 aaKnown RBP8.67□□□□□ -1.02
TSR1-203ENST00000575049 SCUBE3Q8IX30 993 aa8.67□□□□□ -1.02
TSR1-203ENST00000575049 ZNF516Q92618 1163 aa8.67□□□□□ -1.02
TSR1-203ENST00000575049 SLC27A5Q9Y2P5 690 aa8.67□□□□□ -1.02
TSR1-203ENST00000575049 ZPR1O75312 459 aa8.66□□□□□ -1.02
TSR1-203ENST00000575049 NDUFV2P19404 249 aa8.66□□□□□ -1.02
TSR1-203ENST00000575049 GUCA2AQ02747 115 aa8.66□□□□□ -1.02
TSR1-203ENST00000575049 KCNC4Q03721 635 aa8.66□□□□□ -1.02
TSR1-203ENST00000575049 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
TSR1-203ENST00000575049 FDX1P10109 184 aa8.65□□□□□ -1.02
TSR1-203ENST00000575049 RSBN1LQ6PCB5 846 aaPredicted RBP8.65□□□□□ -1.02
TSR1-203ENST00000575049 SPTLC1O15269 473 aa8.64□□□□□ -1.03
TSR1-203ENST00000575049 SH3D19Q5HYK7 790 aa8.64□□□□□ -1.03
TSR1-203ENST00000575049 PLA2G2EQ9NZK7 142 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms