RNA–Protein interactions for RNA: ENST00000574744.1

TOM1L1-219, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-219ENST00000574744 NOS1P29475 1434 aa13.09□□□□□ -0.31
TOM1L1-219ENST00000574744 DCAF11Q8TEB1 546 aa13.09□□□□□ -0.31
TOM1L1-219ENST00000574744 ARID4BQ4LE39 1312 aaPredicted RBP13.09□□□□□ -0.31
TOM1L1-219ENST00000574744 MYOM2P54296 1465 aa13.08□□□□□ -0.32
TOM1L1-219ENST00000574744 ADGRB3O60242 1522 aa13.08□□□□□ -0.32
TOM1L1-219ENST00000574744 KIAA1210Q9ULL0 1709 aa13.08□□□□□ -0.32
TOM1L1-219ENST00000574744 USP47Q96K76 1375 aa13.07□□□□□ -0.32
TOM1L1-219ENST00000574744 MADDQ8WXG6 1647 aa13.07□□□□□ -0.32
TOM1L1-219ENST00000574744 WASHC2CQ9Y4E1 1318 aa13.07□□□□□ -0.32
TOM1L1-219ENST00000574744 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
TOM1L1-219ENST00000574744 IFT172Q9UG01 1749 aa13.06□□□□□ -0.32
TOM1L1-219ENST00000574744 COL17A1Q9UMD9 1497 aaPredicted RBP13.05□□□□□ -0.32
TOM1L1-219ENST00000574744 GGT6Q6P531 493 aa13.05□□□□□ -0.32
TOM1L1-219ENST00000574744 MIER1Q8N108 512 aa13.05□□□□□ -0.32
TOM1L1-219ENST00000574744 ROCK2O75116 1388 aaKnown RBP13.05□□□□□ -0.32
TOM1L1-219ENST00000574744 CCDC7Q96M83 1385 aa13.04□□□□□ -0.32
TOM1L1-219ENST00000574744 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
TOM1L1-219ENST00000574744 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
TOM1L1-219ENST00000574744 WASHC2AQ641Q2 1341 aa13.03□□□□□ -0.32
TOM1L1-219ENST00000574744 RGL3Q3MIN7 710 aa13.02□□□□□ -0.33
TOM1L1-219ENST00000574744 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
TOM1L1-219ENST00000574744 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
TOM1L1-219ENST00000574744 SYNMO15061 1565 aa13.02□□□□□ -0.33
TOM1L1-219ENST00000574744 PREX1Q8TCU6 1659 aa13.02□□□□□ -0.33
TOM1L1-219ENST00000574744 SIGLEC1Q9BZZ2 1709 aa13.02□□□□□ -0.33
TOM1L1-219ENST00000574744 DDX10Q13206 875 aaKnown RBP13.01□□□□□ -0.33
TOM1L1-219ENST00000574744 ZNF326Q5BKZ1 582 aaKnown RBP13.01□□□□□ -0.33
TOM1L1-219ENST00000574744 MROH2AA6NES4 1674 aa13.01□□□□□ -0.33
TOM1L1-219ENST00000574744 UGGT1Q9NYU2 1555 aa13□□□□□ -0.33
TOM1L1-219ENST00000574744 PROM2Q8N271 834 aa13□□□□□ -0.33
TOM1L1-219ENST00000574744 HIRIP3Q9BW71 556 aaPredicted RBP13□□□□□ -0.33
TOM1L1-219ENST00000574744 SLC52A1Q9NWF4 448 aa13□□□□□ -0.33
TOM1L1-219ENST00000574744 PPLO60437 1756 aa12.99□□□□□ -0.33
TOM1L1-219ENST00000574744 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
TOM1L1-219ENST00000574744 SPATA31D1Q6ZQQ2 1576 aa12.98□□□□□ -0.33
TOM1L1-219ENST00000574744 ERVK-7P63135 1459 aa12.97□□□□□ -0.33
TOM1L1-219ENST00000574744 KIF7Q2M1P5 1343 aa12.97□□□□□ -0.33
TOM1L1-219ENST00000574744 SETBP1Q9Y6X0 1596 aa12.97□□□□□ -0.33
TOM1L1-219ENST00000574744 ZFYVE9O95405 1425 aa12.96□□□□□ -0.33
TOM1L1-219ENST00000574744 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
TOM1L1-219ENST00000574744 CCER2I3L3R5 266 aa12.96□□□□□ -0.33
TOM1L1-219ENST00000574744 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
TOM1L1-219ENST00000574744 SPDYE2Q495Y8 402 aa12.96□□□□□ -0.33
TOM1L1-219ENST00000574744 SCAF11Q99590 1463 aaKnown RBP12.96□□□□□ -0.34
TOM1L1-219ENST00000574744 CLTCQ00610 1675 aaKnown RBP12.96□□□□□ -0.34
TOM1L1-219ENST00000574744 ANP32CO43423 234 aa12.95□□□□□ -0.34
TOM1L1-219ENST00000574744 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
TOM1L1-219ENST00000574744 CFAP65Q6ZU64 1925 aaKnown RBP12.94□□□□□ -0.34
TOM1L1-219ENST00000574744 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
TOM1L1-219ENST00000574744 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
TOM1L1-219ENST00000574744 NEXMIFQ5QGS0 1516 aa12.93□□□□□ -0.34
TOM1L1-219ENST00000574744 TMEM131LA2VDJ0 1609 aa12.93□□□□□ -0.34
TOM1L1-219ENST00000574744 C11orf95C9JLR9 678 aaPredicted RBP12.93□□□□□ -0.34
TOM1L1-219ENST00000574744 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
TOM1L1-219ENST00000574744 PIK3C2GO75747 1445 aa12.93□□□□□ -0.34
TOM1L1-219ENST00000574744 ST20-MTHFSA0A0A6YYL1 179 aa12.92□□□□□ -0.34
TOM1L1-219ENST00000574744 CENPBP07199 599 aaPredicted RBP12.92□□□□□ -0.34
TOM1L1-219ENST00000574744 NBPF1Q3BBV0 1214 aa12.92□□□□□ -0.34
TOM1L1-219ENST00000574744 DNAJC5Q9H3Z4 198 aa12.92□□□□□ -0.34
TOM1L1-219ENST00000574744 KDM5AP29375 1690 aaKnown RBP12.91□□□□□ -0.34
TOM1L1-219ENST00000574744 MYO3AQ8NEV4 1616 aa12.91□□□□□ -0.34
TOM1L1-219ENST00000574744 VGFO15240 615 aaPredicted RBP12.89□□□□□ -0.35
TOM1L1-219ENST00000574744 IDI1Q13907 227 aa12.89□□□□□ -0.35
TOM1L1-219ENST00000574744 TESK2Q96S53 571 aa12.89□□□□□ -0.35
TOM1L1-219ENST00000574744 SBNO2Q9Y2G9 1366 aa12.89□□□□□ -0.35
TOM1L1-219ENST00000574744 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
TOM1L1-219ENST00000574744 C14orf93Q9H972 538 aaKnown RBP12.88□□□□□ -0.35
TOM1L1-219ENST00000574744 ADGRB1O14514 1584 aa12.87□□□□□ -0.35
TOM1L1-219ENST00000574744 ZMYM3Q14202 1370 aa12.86□□□□□ -0.35
TOM1L1-219ENST00000574744 KTN1Q86UP2 1357 aaKnown RBP12.86□□□□□ -0.35
TOM1L1-219ENST00000574744 TMF1P82094 1093 aa12.86□□□□□ -0.35
TOM1L1-219ENST00000574744 CDCA8Q53HL2 280 aa12.86□□□□□ -0.35
TOM1L1-219ENST00000574744 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
TOM1L1-219ENST00000574744 MYO5BQ9ULV0 1848 aa12.85□□□□□ -0.35
TOM1L1-219ENST00000574744 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
TOM1L1-219ENST00000574744 CFAP70Q5T0N1 1121 aa12.84□□□□□ -0.35
TOM1L1-219ENST00000574744 A2ML1A8K2U0 1454 aa12.84□□□□□ -0.35
TOM1L1-219ENST00000574744 FBXO31Q5XUX0 539 aaPredicted RBP12.82□□□□□ -0.36
TOM1L1-219ENST00000574744 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
TOM1L1-219ENST00000574744 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
TOM1L1-219ENST00000574744 TNRQ92752 1358 aa12.81□□□□□ -0.36
TOM1L1-219ENST00000574744 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
TOM1L1-219ENST00000574744 FER1L4A9Z1Z3 1794 aa12.8□□□□□ -0.36
TOM1L1-219ENST00000574744 MLECQ14165 292 aa12.8□□□□□ -0.36
TOM1L1-219ENST00000574744 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
TOM1L1-219ENST00000574744 PUS7Q96PZ0 661 aaKnown RBP12.79□□□□□ -0.36
TOM1L1-219ENST00000574744 ARHGEF28Q8N1W1 1705 aaKnown RBP12.78□□□□□ -0.36
TOM1L1-219ENST00000574744 RIMS2Q9UQ26 1411 aa12.78□□□□□ -0.36
TOM1L1-219ENST00000574744 C3P01024 1663 aa12.77□□□□□ -0.36
TOM1L1-219ENST00000574744 UBR1Q8IWV7 1749 aa12.77□□□□□ -0.36
TOM1L1-219ENST00000574744 HDGFP51858 240 aaKnown RBP12.77□□□□□ -0.37
TOM1L1-219ENST00000574744 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
TOM1L1-219ENST00000574744 STAG3Q9UJ98 1225 aa12.77□□□□□ -0.37
TOM1L1-219ENST00000574744 CENPJQ9HC77 1338 aaPredicted RBP12.77□□□□□ -0.37
TOM1L1-219ENST00000574744 ASXL1Q8IXJ9 1541 aa12.77□□□□□ -0.37
TOM1L1-219ENST00000574744 QRICH2Q9H0J4 1663 aa12.77□□□□□ -0.37
TOM1L1-219ENST00000574744 RALBP1Q15311 655 aa12.76□□□□□ -0.37
TOM1L1-219ENST00000574744 DLC1Q96QB1 1528 aa12.76□□□□□ -0.37
TOM1L1-219ENST00000574744 ALKQ9UM73 1620 aa12.76□□□□□ -0.37
TOM1L1-219ENST00000574744 MYOM1P52179 1685 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms