RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 MYO5BQ9ULV0 1848 aa18.72■□□□□ 0.59
CTNS-208ENST00000574218 ANKRD30AQ9BXX3 1397 aa18.72■□□□□ 0.59
CTNS-208ENST00000574218 JCADQ9P266 1359 aa18.71■□□□□ 0.59
CTNS-208ENST00000574218 GCC2Q8IWJ2 1684 aa18.69■□□□□ 0.58
CTNS-208ENST00000574218 PPP1R15AO75807 674 aaPredicted RBP18.68■□□□□ 0.58
CTNS-208ENST00000574218 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
CTNS-208ENST00000574218 SLAIN2Q9P270 581 aa18.68■□□□□ 0.58
CTNS-208ENST00000574218 NOS1P29475 1434 aa18.67■□□□□ 0.58
CTNS-208ENST00000574218 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
CTNS-208ENST00000574218 CHIC2Q9UKJ5 165 aa18.67■□□□□ 0.58
CTNS-208ENST00000574218 MEX3CQ5U5Q3 659 aaKnown RBP18.66■□□□□ 0.58
CTNS-208ENST00000574218 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
CTNS-208ENST00000574218 COL16A1Q07092 1604 aaPredicted RBP18.65■□□□□ 0.58
CTNS-208ENST00000574218 FGD6Q6ZV73 1430 aa18.65■□□□□ 0.58
CTNS-208ENST00000574218 PLEKHG1Q9ULL1 1385 aa18.63■□□□□ 0.57
CTNS-208ENST00000574218 RPRD2Q5VT52 1461 aaKnown RBP18.63■□□□□ 0.57
CTNS-208ENST00000574218 SHPRHQ149N8 1683 aa18.61■□□□□ 0.57
CTNS-208ENST00000574218 RIMS2Q9UQ26 1411 aa18.61■□□□□ 0.57
CTNS-208ENST00000574218 SPATA31A6Q5VVP1 1343 aa18.61■□□□□ 0.57
CTNS-208ENST00000574218 ZNF772Q68DY9 489 aaPredicted RBP18.61■□□□□ 0.57
CTNS-208ENST00000574218 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
CTNS-208ENST00000574218 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.6■□□□□ 0.57
CTNS-208ENST00000574218 TMEM131LA2VDJ0 1609 aa18.6■□□□□ 0.57
CTNS-208ENST00000574218 ZFYVE9O95405 1425 aa18.59■□□□□ 0.57
CTNS-208ENST00000574218 NCOA3Q9Y6Q9 1424 aa18.59■□□□□ 0.57
CTNS-208ENST00000574218 CHGAP10645 457 aaKnown RBP18.58■□□□□ 0.56
CTNS-208ENST00000574218 ATF3P18847 181 aa18.58■□□□□ 0.56
CTNS-208ENST00000574218 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.58■□□□□ 0.56
CTNS-208ENST00000574218 DIP2AQ14689 1571 aa18.58■□□□□ 0.56
CTNS-208ENST00000574218 ADGRL2O95490 1459 aa18.58■□□□□ 0.56
CTNS-208ENST00000574218 AHDC1Q5TGY3 1603 aaPredicted RBP18.57■□□□□ 0.56
CTNS-208ENST00000574218 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
CTNS-208ENST00000574218 TRIM52Q96A61 297 aa18.57■□□□□ 0.56
CTNS-208ENST00000574218 LRP6O75581 1613 aa18.56■□□□□ 0.56
CTNS-208ENST00000574218 TBX22Q9Y458 520 aa18.56■□□□□ 0.56
CTNS-208ENST00000574218 ANKRD50Q9ULJ7 1429 aa18.55■□□□□ 0.56
CTNS-208ENST00000574218 FAM50AQ14320 339 aaKnown RBP18.53■□□□□ 0.56
CTNS-208ENST00000574218 UPF1Q92900 1129 aaKnown RBP eCLIP18.52■□□□□ 0.56
CTNS-208ENST00000574218 C19orf44Q9H6X5 657 aa18.52■□□□□ 0.56
CTNS-208ENST00000574218 TRPM2O94759 1503 aa18.52■□□□□ 0.56
CTNS-208ENST00000574218 PIK3R4Q99570 1358 aa18.52■□□□□ 0.55
CTNS-208ENST00000574218 RXRBP28702 533 aa18.51■□□□□ 0.55
CTNS-208ENST00000574218 UNC13BO14795 1591 aa18.51■□□□□ 0.55
CTNS-208ENST00000574218 E9PCH4 1651 aa18.5■□□□□ 0.55
CTNS-208ENST00000574218 NUTM2BA6NNL0 878 aaPredicted RBP18.49■□□□□ 0.55
CTNS-208ENST00000574218 NUTM2EB1AL46 878 aaPredicted RBP18.49■□□□□ 0.55
CTNS-208ENST00000574218 NUTM2DQ5VT03 806 aaPredicted RBP18.49■□□□□ 0.55
CTNS-208ENST00000574218 NUTM2AQ8IVF1 878 aaPredicted RBP18.49■□□□□ 0.55
CTNS-208ENST00000574218 ADAMTS13Q76LX8 1427 aa18.48■□□□□ 0.55
CTNS-208ENST00000574218 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.55
CTNS-208ENST00000574218 NHSL1Q5SYE7 1610 aa18.45■□□□□ 0.54
CTNS-208ENST00000574218 DCCP43146 1447 aa18.44■□□□□ 0.54
CTNS-208ENST00000574218 BRINP3Q76B58 766 aa18.44■□□□□ 0.54
CTNS-208ENST00000574218 AMOTL2Q9Y2J4 779 aa18.44■□□□□ 0.54
CTNS-208ENST00000574218 IQGAP3Q86VI3 1631 aa18.44■□□□□ 0.54
CTNS-208ENST00000574218 AFF2P51816 1311 aa18.43■□□□□ 0.54
CTNS-208ENST00000574218 ASXL1Q8IXJ9 1541 aa18.43■□□□□ 0.54
CTNS-208ENST00000574218 XRN1Q8IZH2 1706 aaKnown RBP18.4■□□□□ 0.54
CTNS-208ENST00000574218 LRRC59Q96AG4 307 aaKnown RBP18.39■□□□□ 0.53
CTNS-208ENST00000574218 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.53
CTNS-208ENST00000574218 SPHKAPQ2M3C7 1700 aa18.38■□□□□ 0.53
CTNS-208ENST00000574218 PTPRUQ92729 1446 aa18.38■□□□□ 0.53
CTNS-208ENST00000574218 C8orf37Q96NL8 207 aa18.37■□□□□ 0.53
CTNS-208ENST00000574218 MST1RQ04912 1400 aa18.36■□□□□ 0.53
CTNS-208ENST00000574218 NRXN3Q9Y4C0 1643 aa18.36■□□□□ 0.53
CTNS-208ENST00000574218 SETBP1Q9Y6X0 1596 aa18.36■□□□□ 0.53
CTNS-208ENST00000574218 RBM6P78332 1123 aaKnown RBP18.35■□□□□ 0.53
CTNS-208ENST00000574218 ZNF326Q5BKZ1 582 aaKnown RBP18.35■□□□□ 0.53
CTNS-208ENST00000574218 QTRT2Q9H974 415 aaKnown RBP18.35■□□□□ 0.53
CTNS-208ENST00000574218 RGS12O14924 1447 aa18.34■□□□□ 0.53
CTNS-208ENST00000574218 NUP155O75694 1391 aa18.34■□□□□ 0.53
CTNS-208ENST00000574218 NALCNQ8IZF0 1738 aa18.34■□□□□ 0.53
CTNS-208ENST00000574218 ROCK1Q13464 1354 aa18.33■□□□□ 0.53
CTNS-208ENST00000574218 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
CTNS-208ENST00000574218 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
CTNS-208ENST00000574218 KIF1BO60333 1816 aa18.31■□□□□ 0.52
CTNS-208ENST00000574218 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
CTNS-208ENST00000574218 ADAMTS2O95450 1211 aa18.29■□□□□ 0.52
CTNS-208ENST00000574218 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
CTNS-208ENST00000574218 DDX17Q92841 729 aaKnown RBP18.27■□□□□ 0.52
CTNS-208ENST00000574218 METP08581 1390 aa18.27■□□□□ 0.51
CTNS-208ENST00000574218 ITGAEP38570 1179 aa18.26■□□□□ 0.51
CTNS-208ENST00000574218 LAMC1P11047 1609 aa18.24■□□□□ 0.51
CTNS-208ENST00000574218 NEXMIFQ5QGS0 1516 aa18.23■□□□□ 0.51
CTNS-208ENST00000574218 C1orf167Q5SNV9 1468 aa18.23■□□□□ 0.51
CTNS-208ENST00000574218 USP21Q9UK80 565 aa18.23■□□□□ 0.51
CTNS-208ENST00000574218 TRPC5Q9UL62 973 aaPredicted RBP18.23■□□□□ 0.51
CTNS-208ENST00000574218 CLTCL1P53675 1640 aa18.23■□□□□ 0.51
CTNS-208ENST00000574218 PTCH1Q13635 1447 aa18.21■□□□□ 0.51
CTNS-208ENST00000574218 MARF1Q9Y4F3 1742 aaKnown RBP18.2■□□□□ 0.5
CTNS-208ENST00000574218 ZRANB1Q9UGI0 708 aa18.2■□□□□ 0.5
CTNS-208ENST00000574218 COL22A1Q8NFW1 1626 aaPredicted RBP18.19■□□□□ 0.5
CTNS-208ENST00000574218 SOS2Q07890 1332 aaPredicted RBP18.17■□□□□ 0.5
CTNS-208ENST00000574218 VGFO15240 615 aaPredicted RBP18.15■□□□□ 0.5
CTNS-208ENST00000574218 ORAI2Q96SN7 254 aa18.15■□□□□ 0.5
CTNS-208ENST00000574218 ATRNO75882 1429 aa18.15■□□□□ 0.5
CTNS-208ENST00000574218 FNBP4Q8N3X1 1017 aaPredicted RBP18.14■□□□□ 0.49
CTNS-208ENST00000574218 CCDC125Q86Z20 511 aa18.13■□□□□ 0.49
CTNS-208ENST00000574218 HFM1A2PYH4 1435 aa18.13■□□□□ 0.49
CTNS-208ENST00000574218 NPHP3Q7Z494 1330 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms