RNA–Protein interactions for RNA: ENST00000574194.1

ERCC4-205, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-205ENST00000574194 HIC1Q14526 733 aa9.46□□□□□ -0.9
ERCC4-205ENST00000574194 PPP1R18Q6NYC8 613 aa9.46□□□□□ -0.9
ERCC4-205ENST00000574194 PXYLP1Q8TE99 480 aa9.45□□□□□ -0.9
ERCC4-205ENST00000574194 NLRP7Q8WX94 980 aa9.45□□□□□ -0.9
ERCC4-205ENST00000574194 GPR37O15354 613 aa9.44□□□□□ -0.9
ERCC4-205ENST00000574194 BLOC1S3Q6QNY0 202 aa9.44□□□□□ -0.9
ERCC4-205ENST00000574194 NECTIN2Q92692 538 aa9.44□□□□□ -0.9
ERCC4-205ENST00000574194 PCDHB3Q9Y5E6 796 aa9.44□□□□□ -0.9
ERCC4-205ENST00000574194 GNPATO15228 680 aa9.43□□□□□ -0.9
ERCC4-205ENST00000574194 SLC10A3P09131 477 aa9.43□□□□□ -0.9
ERCC4-205ENST00000574194 OATP04181 439 aa9.42□□□□□ -0.9
ERCC4-205ENST00000574194 CFHP08603 1231 aa9.42□□□□□ -0.9
ERCC4-205ENST00000574194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
ERCC4-205ENST00000574194 ZPR1O75312 459 aa9.41□□□□□ -0.9
ERCC4-205ENST00000574194 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
ERCC4-205ENST00000574194 VSIG10Q8N0Z9 540 aa9.41□□□□□ -0.9
ERCC4-205ENST00000574194 GPIHBP1Q8IV16 184 aa9.4□□□□□ -0.9
ERCC4-205ENST00000574194 PRKD2Q9BZL6 878 aa9.4□□□□□ -0.9
ERCC4-205ENST00000574194 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.4□□□□□ -0.9
ERCC4-205ENST00000574194 TLL1O43897 1013 aa9.39□□□□□ -0.91
ERCC4-205ENST00000574194 KMT5BQ4FZB7 885 aa9.38□□□□□ -0.91
ERCC4-205ENST00000574194 PRR14Q9BWN1 585 aa9.38□□□□□ -0.91
ERCC4-205ENST00000574194 ACTN4O43707 911 aaKnown RBP9.37□□□□□ -0.91
ERCC4-205ENST00000574194 PHOX2BQ99453 314 aa9.37□□□□□ -0.91
ERCC4-205ENST00000574194 PUS10Q3MIT2 529 aaKnown RBP9.35□□□□□ -0.91
ERCC4-205ENST00000574194 RDH13Q8NBN7 331 aa9.34□□□□□ -0.91
ERCC4-205ENST00000574194 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
ERCC4-205ENST00000574194 Q6ZNB5 142 aa9.33□□□□□ -0.92
ERCC4-205ENST00000574194 PPEF1O14829 653 aaPredicted RBP9.32□□□□□ -0.92
ERCC4-205ENST00000574194 GFRA3O60609 400 aa9.32□□□□□ -0.92
ERCC4-205ENST00000574194 GGCXP38435 758 aa9.32□□□□□ -0.92
ERCC4-205ENST00000574194 DAXXQ9UER7 740 aaPredicted RBP9.32□□□□□ -0.92
ERCC4-205ENST00000574194 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
ERCC4-205ENST00000574194 S1PR4O95977 384 aa9.3□□□□□ -0.92
ERCC4-205ENST00000574194 RSPH4AQ5TD94 716 aa9.3□□□□□ -0.92
ERCC4-205ENST00000574194 NR1I2O75469 434 aa9.29□□□□□ -0.92
ERCC4-205ENST00000574194 SCUBE3Q8IX30 993 aa9.29□□□□□ -0.92
ERCC4-205ENST00000574194 TMUB1Q9BVT8 246 aa9.28□□□□□ -0.92
ERCC4-205ENST00000574194 V9GY48 417 aaPredicted RBP9.28□□□□□ -0.92
ERCC4-205ENST00000574194 FUT2Q10981 343 aa9.27□□□□□ -0.93
ERCC4-205ENST00000574194 EMID1Q96A84 441 aaPredicted RBP9.27□□□□□ -0.93
ERCC4-205ENST00000574194 TULP1O00294 542 aaPredicted RBP9.26□□□□□ -0.93
ERCC4-205ENST00000574194 ADH1BP00325 375 aa9.25□□□□□ -0.93
ERCC4-205ENST00000574194 SLC19A1P41440 591 aa9.24□□□□□ -0.93
ERCC4-205ENST00000574194 GCGRP47871 477 aa9.24□□□□□ -0.93
ERCC4-205ENST00000574194 MAP2K5Q13163 448 aa9.24□□□□□ -0.93
ERCC4-205ENST00000574194 SLC6A16Q9GZN6 736 aa9.24□□□□□ -0.93
ERCC4-205ENST00000574194 LCE2BO14633 110 aa9.23□□□□□ -0.93
ERCC4-205ENST00000574194 IRF6O14896 467 aa9.23□□□□□ -0.93
ERCC4-205ENST00000574194 MORN1Q5T089 497 aa9.23□□□□□ -0.93
ERCC4-205ENST00000574194 SPSB2Q99619 263 aa9.23□□□□□ -0.93
ERCC4-205ENST00000574194 PDZRN3Q9UPQ7 1066 aa9.23□□□□□ -0.93
ERCC4-205ENST00000574194 MDM2Q00987 491 aaPredicted RBP9.22□□□□□ -0.93
ERCC4-205ENST00000574194 LIAT1Q6ZQX7 453 aa9.22□□□□□ -0.93
ERCC4-205ENST00000574194 SULF1Q8IWU6 871 aa9.22□□□□□ -0.93
ERCC4-205ENST00000574194 SLC27A5Q9Y2P5 690 aa9.22□□□□□ -0.93
ERCC4-205ENST00000574194 ATP6V1AP38606 617 aa9.21□□□□□ -0.94
ERCC4-205ENST00000574194 LAPTM4AQ15012 233 aa9.21□□□□□ -0.94
ERCC4-205ENST00000574194 PLA2G2CQ5R387 149 aa9.21□□□□□ -0.94
ERCC4-205ENST00000574194 ANKLE1Q8NAG6 615 aa9.21□□□□□ -0.94
ERCC4-205ENST00000574194 NRG2O14511 850 aaPredicted RBP9.2□□□□□ -0.94
ERCC4-205ENST00000574194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.2□□□□□ -0.94
ERCC4-205ENST00000574194 CCDC102AQ96A19 550 aa9.2□□□□□ -0.94
ERCC4-205ENST00000574194 MINK1Q8N4C8 1332 aaPredicted RBP9.19□□□□□ -0.94
ERCC4-205ENST00000574194 SPRYD7Q5W111 196 aa9.18□□□□□ -0.94
ERCC4-205ENST00000574194 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
ERCC4-205ENST00000574194 THAP11Q96EK4 314 aa9.18□□□□□ -0.94
ERCC4-205ENST00000574194 CD46P15529 392 aa9.17□□□□□ -0.94
ERCC4-205ENST00000574194 LMOD2Q6P5Q4 547 aa9.17□□□□□ -0.94
ERCC4-205ENST00000574194 TRAF7Q6Q0C0 670 aa9.17□□□□□ -0.94
ERCC4-205ENST00000574194 RNF19BQ6ZMZ0 732 aa9.17□□□□□ -0.94
ERCC4-205ENST00000574194 FAM160A2Q8N612 972 aaPredicted RBP9.17□□□□□ -0.94
ERCC4-205ENST00000574194 PRDM9Q9NQV7 894 aa9.17□□□□□ -0.94
ERCC4-205ENST00000574194 FMNL1O95466 1100 aaPredicted RBP9.16□□□□□ -0.94
ERCC4-205ENST00000574194 HLA-CQ95604 372 aa9.16□□□□□ -0.94
ERCC4-205ENST00000574194 ZNF697Q5TEC3 545 aa9.15□□□□□ -0.94
ERCC4-205ENST00000574194 TNFRSF10AO00220 468 aa9.14□□□□□ -0.95
ERCC4-205ENST00000574194 BRICD5Q6PL45 260 aa9.14□□□□□ -0.95
ERCC4-205ENST00000574194 ZNF598Q86UK7 904 aaKnown RBP9.14□□□□□ -0.95
ERCC4-205ENST00000574194 KRI1Q8N9T8 703 aaKnown RBP9.13□□□□□ -0.95
ERCC4-205ENST00000574194 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
ERCC4-205ENST00000574194 KDM4AO75164 1064 aa9.12□□□□□ -0.95
ERCC4-205ENST00000574194 FOXC1Q12948 553 aa9.11□□□□□ -0.95
ERCC4-205ENST00000574194 GRIPAP1Q4V328 841 aa9.11□□□□□ -0.95
ERCC4-205ENST00000574194 REPIN1Q9BWE0 567 aaKnown RBP9.11□□□□□ -0.95
ERCC4-205ENST00000574194 GUCA2AQ02747 115 aa9.1□□□□□ -0.95
ERCC4-205ENST00000574194 GPCPD1Q9NPB8 672 aa9.1□□□□□ -0.95
ERCC4-205ENST00000574194 FAM217BQ9NTX9 383 aaPredicted RBP9.09□□□□□ -0.95
ERCC4-205ENST00000574194 GDF9O60383 454 aa9.08□□□□□ -0.96
ERCC4-205ENST00000574194 CLCN1P35523 988 aa9.08□□□□□ -0.96
ERCC4-205ENST00000574194 ZC3H15Q8WU90 426 aaKnown RBP9.08□□□□□ -0.96
ERCC4-205ENST00000574194 SALL2Q9Y467 1007 aaPredicted RBP9.08□□□□□ -0.96
ERCC4-205ENST00000574194 SYMPKQ92797 1274 aaKnown RBP9.07□□□□□ -0.96
ERCC4-205ENST00000574194 FAM187AA6NFU0 413 aa9.06□□□□□ -0.96
ERCC4-205ENST00000574194 HOXA2O43364 376 aa9.06□□□□□ -0.96
ERCC4-205ENST00000574194 ZMYND10O75800 440 aa9.06□□□□□ -0.96
ERCC4-205ENST00000574194 Q3C1V9 767 aa9.06□□□□□ -0.96
ERCC4-205ENST00000574194 BARGINQ6ZT62 677 aa9.06□□□□□ -0.96
ERCC4-205ENST00000574194 PKD2L1Q9P0L9 805 aa9.06□□□□□ -0.96
ERCC4-205ENST00000574194 MSS51Q4VC12 460 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms