RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 RSPH6AQ9H0K4 717 aa12.13□□□□□ -0.47
TOM1L1-216ENST00000573607 SEPT9Q9UHD8 586 aaPredicted RBP12.13□□□□□ -0.47
TOM1L1-216ENST00000573607 ZNF687Q8N1G0 1237 aa12.11□□□□□ -0.47
TOM1L1-216ENST00000573607 SPIRE2Q8WWL2 714 aa12.1□□□□□ -0.47
TOM1L1-216ENST00000573607 RABGEF1Q9UJ41 708 aa12.1□□□□□ -0.47
TOM1L1-216ENST00000573607 ATP1B4Q9UN42 357 aaPredicted RBP12.1□□□□□ -0.47
TOM1L1-216ENST00000573607 SULF1Q8IWU6 871 aa12.08□□□□□ -0.48
TOM1L1-216ENST00000573607 HS3ST6Q96QI5 342 aa12.08□□□□□ -0.48
TOM1L1-216ENST00000573607 SLC4A5Q9BY07 1137 aa12.08□□□□□ -0.48
TOM1L1-216ENST00000573607 VPS9D1Q9Y2B5 631 aa12.08□□□□□ -0.48
TOM1L1-216ENST00000573607 SWT1Q5T5J6 900 aaKnown RBP12.07□□□□□ -0.48
TOM1L1-216ENST00000573607 LCE2DQ5TA82 110 aaPredicted RBP12.07□□□□□ -0.48
TOM1L1-216ENST00000573607 PBX2P40425 430 aa12.06□□□□□ -0.48
TOM1L1-216ENST00000573607 CLK2P49760 499 aaKnown RBP12.06□□□□□ -0.48
TOM1L1-216ENST00000573607 FBXO31Q5XUX0 539 aaPredicted RBP12.06□□□□□ -0.48
TOM1L1-216ENST00000573607 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
TOM1L1-216ENST00000573607 LIMD1Q9UGP4 676 aa12.06□□□□□ -0.48
TOM1L1-216ENST00000573607 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
TOM1L1-216ENST00000573607 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.05□□□□□ -0.48
TOM1L1-216ENST00000573607 SLC10A3P09131 477 aa12.03□□□□□ -0.48
TOM1L1-216ENST00000573607 RIC3Q7Z5B4 369 aa12.03□□□□□ -0.48
TOM1L1-216ENST00000573607 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
TOM1L1-216ENST00000573607 MOXD2PA6NHM9 499 aa12.02□□□□□ -0.49
TOM1L1-216ENST00000573607 NDUFV2P19404 249 aa12.02□□□□□ -0.49
TOM1L1-216ENST00000573607 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
TOM1L1-216ENST00000573607 FAM98CQ17RN3 349 aaKnown RBP12.01□□□□□ -0.49
TOM1L1-216ENST00000573607 ZMYND15Q9H091 742 aa12.01□□□□□ -0.49
TOM1L1-216ENST00000573607 BHMG1C9JSJ3 638 aaPredicted RBP12□□□□□ -0.49
TOM1L1-216ENST00000573607 GCGRP47871 477 aa11.99□□□□□ -0.49
TOM1L1-216ENST00000573607 CSPP1Q1MSJ5 1256 aa11.99□□□□□ -0.49
TOM1L1-216ENST00000573607 SAMD7Q7Z3H4 446 aa11.99□□□□□ -0.49
TOM1L1-216ENST00000573607 SPTLC1O15269 473 aa11.98□□□□□ -0.49
TOM1L1-216ENST00000573607 FLIIQ13045 1269 aa11.98□□□□□ -0.49
TOM1L1-216ENST00000573607 RSBN1LQ6PCB5 846 aaPredicted RBP11.98□□□□□ -0.49
TOM1L1-216ENST00000573607 KDM4AO75164 1064 aa11.97□□□□□ -0.49
TOM1L1-216ENST00000573607 PCDHB15Q9Y5E8 787 aa11.97□□□□□ -0.49
TOM1L1-216ENST00000573607 HLA-CQ95604 372 aa11.96□□□□□ -0.49
TOM1L1-216ENST00000573607 RFC5P40937 340 aa11.95□□□□□ -0.5
TOM1L1-216ENST00000573607 LSM11P83369 360 aaKnown RBP eCLIP11.95□□□□□ -0.5
TOM1L1-216ENST00000573607 QPCTQ16769 361 aa11.95□□□□□ -0.5
TOM1L1-216ENST00000573607 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
TOM1L1-216ENST00000573607 TK2O00142 265 aa11.94□□□□□ -0.5
TOM1L1-216ENST00000573607 HDGFP51858 240 aaKnown RBP11.94□□□□□ -0.5
TOM1L1-216ENST00000573607 GUCA2AQ02747 115 aa11.94□□□□□ -0.5
TOM1L1-216ENST00000573607 MCM6Q14566 821 aa11.94□□□□□ -0.5
TOM1L1-216ENST00000573607 ADGRD1Q6QNK2 874 aa11.94□□□□□ -0.5
TOM1L1-216ENST00000573607 LAPTM4BQ86VI4 370 aa11.94□□□□□ -0.5
TOM1L1-216ENST00000573607 ZFRQ96KR1 1074 aaKnown RBP11.94□□□□□ -0.5
TOM1L1-216ENST00000573607 RNF40O75150 1001 aa11.93□□□□□ -0.5
TOM1L1-216ENST00000573607 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
TOM1L1-216ENST00000573607 HOXA2O43364 376 aa11.92□□□□□ -0.5
TOM1L1-216ENST00000573607 TUSC1Q2TAM9 212 aa11.91□□□□□ -0.5
TOM1L1-216ENST00000573607 PPP2R2DQ66LE6 453 aa11.91□□□□□ -0.5
TOM1L1-216ENST00000573607 SLF2Q8IX21 1173 aa11.91□□□□□ -0.5
TOM1L1-216ENST00000573607 MRPL50Q8N5N7 158 aaKnown RBP11.91□□□□□ -0.5
TOM1L1-216ENST00000573607 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
TOM1L1-216ENST00000573607 CLUAP1Q96AJ1 413 aa11.91□□□□□ -0.5
TOM1L1-216ENST00000573607 HRO43593 1189 aa11.9□□□□□ -0.5
TOM1L1-216ENST00000573607 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.5
TOM1L1-216ENST00000573607 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
TOM1L1-216ENST00000573607 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
TOM1L1-216ENST00000573607 PCDHGC3Q9UN70 934 aa11.9□□□□□ -0.5
TOM1L1-216ENST00000573607 LILRB3O75022 631 aa11.89□□□□□ -0.51
TOM1L1-216ENST00000573607 CFHP08603 1231 aa11.89□□□□□ -0.51
TOM1L1-216ENST00000573607 FDX1P10109 184 aa11.88□□□□□ -0.51
TOM1L1-216ENST00000573607 GJA5P36382 358 aa11.88□□□□□ -0.51
TOM1L1-216ENST00000573607 USP46P62068 366 aa11.88□□□□□ -0.51
TOM1L1-216ENST00000573607 FUT2Q10981 343 aa11.88□□□□□ -0.51
TOM1L1-216ENST00000573607 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
TOM1L1-216ENST00000573607 SLC4A3P48751 1232 aa11.86□□□□□ -0.51
TOM1L1-216ENST00000573607 POM121Q96HA1 1249 aa11.86□□□□□ -0.51
TOM1L1-216ENST00000573607 NUTM2BA6NNL0 878 aaPredicted RBP11.85□□□□□ -0.51
TOM1L1-216ENST00000573607 NUTM2EB1AL46 878 aaPredicted RBP11.85□□□□□ -0.51
TOM1L1-216ENST00000573607 HRCP23327 699 aa11.85□□□□□ -0.51
TOM1L1-216ENST00000573607 NUTM2DQ5VT03 806 aaPredicted RBP11.85□□□□□ -0.51
TOM1L1-216ENST00000573607 NUTM2AQ8IVF1 878 aaPredicted RBP11.85□□□□□ -0.51
TOM1L1-216ENST00000573607 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
TOM1L1-216ENST00000573607 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.84□□□□□ -0.51
TOM1L1-216ENST00000573607 TMEM259Q4ZIN3 620 aa11.83□□□□□ -0.52
TOM1L1-216ENST00000573607 BANK1Q8NDB2 785 aa11.83□□□□□ -0.52
TOM1L1-216ENST00000573607 SPDYE5A6NIY4 337 aa11.82□□□□□ -0.52
TOM1L1-216ENST00000573607 AP1G2O75843 785 aa11.82□□□□□ -0.52
TOM1L1-216ENST00000573607 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
TOM1L1-216ENST00000573607 ARID3CA6NKF2 412 aa11.81□□□□□ -0.52
TOM1L1-216ENST00000573607 BCAMP50895 628 aa11.81□□□□□ -0.52
TOM1L1-216ENST00000573607 PUS10Q3MIT2 529 aaKnown RBP11.81□□□□□ -0.52
TOM1L1-216ENST00000573607 PRPF38BQ5VTL8 546 aaKnown RBP11.81□□□□□ -0.52
TOM1L1-216ENST00000573607 A6NJR5 290 aa11.8□□□□□ -0.52
TOM1L1-216ENST00000573607 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
TOM1L1-216ENST00000573607 STAC3Q96MF2 364 aa11.8□□□□□ -0.52
TOM1L1-216ENST00000573607 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
TOM1L1-216ENST00000573607 GOLGA8CPA6NN73 597 aa11.79□□□□□ -0.52
TOM1L1-216ENST00000573607 ATP6V1AP38606 617 aa11.79□□□□□ -0.52
TOM1L1-216ENST00000573607 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
TOM1L1-216ENST00000573607 KRTAP3-3Q9BYR6 98 aa11.79□□□□□ -0.52
TOM1L1-216ENST00000573607 KRTAP3-2Q9BYR7 98 aa11.79□□□□□ -0.52
TOM1L1-216ENST00000573607 KMT5BQ4FZB7 885 aa11.78□□□□□ -0.52
TOM1L1-216ENST00000573607 ANKK1Q8NFD2 765 aa11.78□□□□□ -0.52
TOM1L1-216ENST00000573607 COG6Q9Y2V7 657 aa11.78□□□□□ -0.52
TOM1L1-216ENST00000573607 MTMR2Q13614 643 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms