RNA–Protein interactions for RNA: ENST00000573319.1

BCAR4-204, Transcript of breast cancer anti-estrogen resistance 4, humanhuman

TSL 5 BASIC

Gene BCAR4, Length 1,273 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR4-204ENST00000573319 SLF2Q8IX21 1173 aa10.07□□□□□ -0.8
BCAR4-204ENST00000573319 DNAJB2P25686 324 aa10.06□□□□□ -0.8
BCAR4-204ENST00000573319 SLC4A3P48751 1232 aa10.06□□□□□ -0.8
BCAR4-204ENST00000573319 APLP1P51693 650 aa10.05□□□□□ -0.8
BCAR4-204ENST00000573319 HIC1Q14526 733 aa10.05□□□□□ -0.8
BCAR4-204ENST00000573319 RCCD1A6NED2 376 aa10.03□□□□□ -0.8
BCAR4-204ENST00000573319 FECHP22830 423 aa10.03□□□□□ -0.8
BCAR4-204ENST00000573319 MTRQ99707 1265 aa10.03□□□□□ -0.8
BCAR4-204ENST00000573319 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
BCAR4-204ENST00000573319 TMEM134Q9H6X4 195 aa10.02□□□□□ -0.81
BCAR4-204ENST00000573319 GNPATO15228 680 aa10.01□□□□□ -0.81
BCAR4-204ENST00000573319 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
BCAR4-204ENST00000573319 LMOD2Q6P5Q4 547 aa10.01□□□□□ -0.81
BCAR4-204ENST00000573319 GPIHBP1Q8IV16 184 aa10.01□□□□□ -0.81
BCAR4-204ENST00000573319 GPR37O15354 613 aa10□□□□□ -0.81
BCAR4-204ENST00000573319 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10□□□□□ -0.81
BCAR4-204ENST00000573319 OATP04181 439 aa9.99□□□□□ -0.81
BCAR4-204ENST00000573319 BRPF1P55201 1214 aaPredicted RBP9.99□□□□□ -0.81
BCAR4-204ENST00000573319 PXYLP1Q8TE99 480 aa9.99□□□□□ -0.81
BCAR4-204ENST00000573319 IL21Q9HBE4 155 aa9.99□□□□□ -0.81
BCAR4-204ENST00000573319 COPS2P61201 443 aa9.98□□□□□ -0.81
BCAR4-204ENST00000573319 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.97□□□□□ -0.81
BCAR4-204ENST00000573319 METTL3Q86U44 580 aaKnown RBP9.97□□□□□ -0.81
BCAR4-204ENST00000573319 ZNF516Q92618 1163 aa9.97□□□□□ -0.81
BCAR4-204ENST00000573319 RGS20O76081 388 aa9.95□□□□□ -0.82
BCAR4-204ENST00000573319 PRR14Q9BWN1 585 aa9.95□□□□□ -0.82
BCAR4-204ENST00000573319 NLRP7Q8WX94 980 aa9.94□□□□□ -0.82
BCAR4-204ENST00000573319 PCDHB3Q9Y5E6 796 aa9.94□□□□□ -0.82
BCAR4-204ENST00000573319 CFHP08603 1231 aa9.93□□□□□ -0.82
BCAR4-204ENST00000573319 RANGAP1P46060 587 aaPredicted RBP9.93□□□□□ -0.82
BCAR4-204ENST00000573319 SUPT5HO00267 1087 aaKnown RBP9.92□□□□□ -0.82
BCAR4-204ENST00000573319 SLC10A3P09131 477 aa9.92□□□□□ -0.82
BCAR4-204ENST00000573319 KMT5BQ4FZB7 885 aa9.92□□□□□ -0.82
BCAR4-204ENST00000573319 NKX2-3Q8TAU0 364 aa9.92□□□□□ -0.82
BCAR4-204ENST00000573319 BLOC1S3Q6QNY0 202 aa9.91□□□□□ -0.82
BCAR4-204ENST00000573319 PODXL2Q9NZ53 605 aa9.91□□□□□ -0.82
BCAR4-204ENST00000573319 PPP1R18Q6NYC8 613 aa9.89□□□□□ -0.83
BCAR4-204ENST00000573319 ACTN4O43707 911 aaKnown RBP9.88□□□□□ -0.83
BCAR4-204ENST00000573319 ZPR1O75312 459 aa9.88□□□□□ -0.83
BCAR4-204ENST00000573319 PHOX2BQ99453 314 aa9.88□□□□□ -0.83
BCAR4-204ENST00000573319 NEUROD2Q15784 382 aa9.87□□□□□ -0.83
BCAR4-204ENST00000573319 RSPH4AQ5TD94 716 aa9.87□□□□□ -0.83
BCAR4-204ENST00000573319 RDH13Q8NBN7 331 aa9.87□□□□□ -0.83
BCAR4-204ENST00000573319 DDX11L8A8MPP1 907 aa9.86□□□□□ -0.83
BCAR4-204ENST00000573319 IRX2Q9BZI1 471 aaPredicted RBP9.86□□□□□ -0.83
BCAR4-204ENST00000573319 TLL1O43897 1013 aa9.85□□□□□ -0.83
BCAR4-204ENST00000573319 MAP2K5Q13163 448 aa9.85□□□□□ -0.83
BCAR4-204ENST00000573319 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.85□□□□□ -0.83
BCAR4-204ENST00000573319 PUS10Q3MIT2 529 aaKnown RBP9.83□□□□□ -0.84
BCAR4-204ENST00000573319 ZC3H15Q8WU90 426 aaKnown RBP9.83□□□□□ -0.84
BCAR4-204ENST00000573319 GGCXP38435 758 aa9.82□□□□□ -0.84
BCAR4-204ENST00000573319 PRKD2Q9BZL6 878 aa9.82□□□□□ -0.84
BCAR4-204ENST00000573319 CCDC180Q9P1Z9 1646 aa9.81□□□□□ -0.84
BCAR4-204ENST00000573319 IRF6O14896 467 aa9.8□□□□□ -0.84
BCAR4-204ENST00000573319 NR1I2O75469 434 aa9.8□□□□□ -0.84
BCAR4-204ENST00000573319 SULF1Q8IWU6 871 aa9.8□□□□□ -0.84
BCAR4-204ENST00000573319 FUT2Q10981 343 aa9.78□□□□□ -0.84
BCAR4-204ENST00000573319 CCDC102AQ96A19 550 aa9.78□□□□□ -0.84
BCAR4-204ENST00000573319 MINK1Q8N4C8 1332 aaPredicted RBP9.78□□□□□ -0.84
BCAR4-204ENST00000573319 SCUBE3Q8IX30 993 aa9.77□□□□□ -0.85
BCAR4-204ENST00000573319 S1PR4O95977 384 aa9.76□□□□□ -0.85
BCAR4-204ENST00000573319 MDM2Q00987 491 aaPredicted RBP9.76□□□□□ -0.85
BCAR4-204ENST00000573319 SLC24A3Q9HC58 644 aa9.76□□□□□ -0.85
BCAR4-204ENST00000573319 RNF223E7ERA6 249 aa9.75□□□□□ -0.85
BCAR4-204ENST00000573319 PPEF1O14829 653 aaPredicted RBP9.75□□□□□ -0.85
BCAR4-204ENST00000573319 ADH1BP00325 375 aa9.75□□□□□ -0.85
BCAR4-204ENST00000573319 GCGRP47871 477 aa9.75□□□□□ -0.85
BCAR4-204ENST00000573319 TMUB1Q9BVT8 246 aa9.75□□□□□ -0.85
BCAR4-204ENST00000573319 ATP6V1AP38606 617 aa9.73□□□□□ -0.85
BCAR4-204ENST00000573319 MORN1Q5T089 497 aa9.73□□□□□ -0.85
BCAR4-204ENST00000573319 KRI1Q8N9T8 703 aaKnown RBP9.73□□□□□ -0.85
BCAR4-204ENST00000573319 V9GY48 417 aaPredicted RBP9.73□□□□□ -0.85
BCAR4-204ENST00000573319 UBTFP17480 764 aaKnown RBP9.72□□□□□ -0.85
BCAR4-204ENST00000573319 SPSB2Q99619 263 aa9.72□□□□□ -0.85
BCAR4-204ENST00000573319 SLC6A16Q9GZN6 736 aa9.72□□□□□ -0.85
BCAR4-204ENST00000573319 ZMYND15Q9H091 742 aa9.71□□□□□ -0.86
BCAR4-204ENST00000573319 SLC27A5Q9Y2P5 690 aa9.71□□□□□ -0.86
BCAR4-204ENST00000573319 CD46P15529 392 aa9.7□□□□□ -0.86
BCAR4-204ENST00000573319 Q6ZNB5 142 aa9.7□□□□□ -0.86
BCAR4-204ENST00000573319 GFRA3O60609 400 aa9.69□□□□□ -0.86
BCAR4-204ENST00000573319 ZMYND10O75800 440 aa9.69□□□□□ -0.86
BCAR4-204ENST00000573319 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
BCAR4-204ENST00000573319 SLC19A1P41440 591 aa9.68□□□□□ -0.86
BCAR4-204ENST00000573319 ANKLE1Q8NAG6 615 aa9.68□□□□□ -0.86
BCAR4-204ENST00000573319 GPCPD1Q9NPB8 672 aa9.68□□□□□ -0.86
BCAR4-204ENST00000573319 FMNL1O95466 1100 aaPredicted RBP9.67□□□□□ -0.86
BCAR4-204ENST00000573319 CLCN1P35523 988 aa9.67□□□□□ -0.86
BCAR4-204ENST00000573319 GRIPAP1Q4V328 841 aa9.67□□□□□ -0.86
BCAR4-204ENST00000573319 KDM4AO75164 1064 aa9.66□□□□□ -0.86
BCAR4-204ENST00000573319 TRIM26Q12899 539 aaPredicted RBP9.66□□□□□ -0.86
BCAR4-204ENST00000573319 BARGINQ6ZT62 677 aa9.66□□□□□ -0.86
BCAR4-204ENST00000573319 EMID1Q96A84 441 aaPredicted RBP9.66□□□□□ -0.86
BCAR4-204ENST00000573319 THAP11Q96EK4 314 aa9.66□□□□□ -0.86
BCAR4-204ENST00000573319 LAPTM4AQ15012 233 aa9.65□□□□□ -0.86
BCAR4-204ENST00000573319 RNF19BQ6ZMZ0 732 aa9.65□□□□□ -0.86
BCAR4-204ENST00000573319 LIAT1Q6ZQX7 453 aa9.64□□□□□ -0.87
BCAR4-204ENST00000573319 PRDM9Q9NQV7 894 aa9.64□□□□□ -0.87
BCAR4-204ENST00000573319 FAM217BQ9NTX9 383 aaPredicted RBP9.64□□□□□ -0.87
BCAR4-204ENST00000573319 PDZRN3Q9UPQ7 1066 aa9.64□□□□□ -0.87
BCAR4-204ENST00000573319 TTLL12Q14166 644 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms