RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
NDE1-207ENST00000573203 NOS1P29475 1434 aa13.73□□□□□ -0.21
NDE1-207ENST00000573203 MED14O60244 1454 aa13.73□□□□□ -0.21
NDE1-207ENST00000573203 IQGAP1P46940 1657 aa13.72□□□□□ -0.21
NDE1-207ENST00000573203 NUP155O75694 1391 aa13.72□□□□□ -0.21
NDE1-207ENST00000573203 IDI1Q13907 227 aa13.72□□□□□ -0.21
NDE1-207ENST00000573203 KDM5AP29375 1690 aaKnown RBP13.72□□□□□ -0.21
NDE1-207ENST00000573203 SLC52A1Q9NWF4 448 aa13.71□□□□□ -0.21
NDE1-207ENST00000573203 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
NDE1-207ENST00000573203 E9PCH4 1651 aa13.71□□□□□ -0.21
NDE1-207ENST00000573203 SLIT1O75093 1534 aa13.7□□□□□ -0.22
NDE1-207ENST00000573203 ARHGAP23Q9P227 1491 aa13.7□□□□□ -0.22
NDE1-207ENST00000573203 ABCB7O75027 752 aa13.7□□□□□ -0.22
NDE1-207ENST00000573203 EID1Q9Y6B2 187 aa13.7□□□□□ -0.22
NDE1-207ENST00000573203 IQSEC2Q5JU85 1478 aa13.69□□□□□ -0.22
NDE1-207ENST00000573203 SCAF11Q99590 1463 aaKnown RBP13.69□□□□□ -0.22
NDE1-207ENST00000573203 TXNDC2Q86VQ3 553 aa13.69□□□□□ -0.22
NDE1-207ENST00000573203 NAIPQ13075 1403 aa13.69□□□□□ -0.22
NDE1-207ENST00000573203 ADGRB3O60242 1522 aa13.69□□□□□ -0.22
NDE1-207ENST00000573203 LTKP29376 864 aa13.68□□□□□ -0.22
NDE1-207ENST00000573203 TMEM2Q9UHN6 1383 aa13.68□□□□□ -0.22
NDE1-207ENST00000573203 MYO5BQ9ULV0 1848 aa13.67□□□□□ -0.22
NDE1-207ENST00000573203 HFM1A2PYH4 1435 aa13.65□□□□□ -0.22
NDE1-207ENST00000573203 CPS1P31327 1500 aa13.65□□□□□ -0.22
NDE1-207ENST00000573203 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
NDE1-207ENST00000573203 POLA2Q14181 598 aa13.64□□□□□ -0.23
NDE1-207ENST00000573203 TMEM131LA2VDJ0 1609 aa13.64□□□□□ -0.23
NDE1-207ENST00000573203 TRIM52Q96A61 297 aa13.63□□□□□ -0.23
NDE1-207ENST00000573203 SPHKAPQ2M3C7 1700 aa13.63□□□□□ -0.23
NDE1-207ENST00000573203 STRCP1A6NGW2 1772 aa13.61□□□□□ -0.23
NDE1-207ENST00000573203 UBAP1LF5GYI3 381 aa13.61□□□□□ -0.23
NDE1-207ENST00000573203 HDGFP51858 240 aaKnown RBP13.61□□□□□ -0.23
NDE1-207ENST00000573203 PPP1R15AO75807 674 aaPredicted RBP13.6□□□□□ -0.23
NDE1-207ENST00000573203 BCANQ96GW7 911 aa13.6□□□□□ -0.23
NDE1-207ENST00000573203 RIMS2Q9UQ26 1411 aa13.6□□□□□ -0.23
NDE1-207ENST00000573203 ZFYVE9O95405 1425 aa13.58□□□□□ -0.24
NDE1-207ENST00000573203 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.58□□□□□ -0.24
NDE1-207ENST00000573203 SLC26A8Q96RN1 970 aa13.58□□□□□ -0.24
NDE1-207ENST00000573203 LRRC7Q96NW7 1537 aa13.56□□□□□ -0.24
NDE1-207ENST00000573203 PLEKHG1Q9ULL1 1385 aa13.56□□□□□ -0.24
NDE1-207ENST00000573203 TRPM2O94759 1503 aa13.55□□□□□ -0.24
NDE1-207ENST00000573203 CLTCL1P53675 1640 aa13.55□□□□□ -0.24
NDE1-207ENST00000573203 TOM1O60784 492 aa13.55□□□□□ -0.24
NDE1-207ENST00000573203 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
NDE1-207ENST00000573203 KIF1BO60333 1816 aa13.55□□□□□ -0.24
NDE1-207ENST00000573203 ZNF326Q5BKZ1 582 aaKnown RBP13.54□□□□□ -0.24
NDE1-207ENST00000573203 KCNA6P17658 529 aa13.53□□□□□ -0.24
NDE1-207ENST00000573203 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
NDE1-207ENST00000573203 PIP4K2BP78356 416 aa13.52□□□□□ -0.25
NDE1-207ENST00000573203 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
NDE1-207ENST00000573203 SETD5Q9C0A6 1442 aa13.51□□□□□ -0.25
NDE1-207ENST00000573203 CHD2O14647 1828 aaKnown RBP13.5□□□□□ -0.25
NDE1-207ENST00000573203 ACIN1Q9UKV3 1341 aaKnown RBP13.5□□□□□ -0.25
NDE1-207ENST00000573203 TBX22Q9Y458 520 aa13.5□□□□□ -0.25
NDE1-207ENST00000573203 DIP2AQ14689 1571 aa13.49□□□□□ -0.25
NDE1-207ENST00000573203 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
NDE1-207ENST00000573203 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
NDE1-207ENST00000573203 NKTRP30414 1462 aaKnown RBP13.48□□□□□ -0.25
NDE1-207ENST00000573203 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
NDE1-207ENST00000573203 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
NDE1-207ENST00000573203 TMEM94Q12767 1356 aa13.47□□□□□ -0.25
NDE1-207ENST00000573203 ALKQ9UM73 1620 aa13.47□□□□□ -0.25
NDE1-207ENST00000573203 NEXMIFQ5QGS0 1516 aa13.47□□□□□ -0.25
NDE1-207ENST00000573203 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
NDE1-207ENST00000573203 RAB3GAP2Q9H2M9 1393 aa13.45□□□□□ -0.26
NDE1-207ENST00000573203 NRXN3Q9Y4C0 1643 aa13.45□□□□□ -0.26
NDE1-207ENST00000573203 SETBP1Q9Y6X0 1596 aa13.45□□□□□ -0.26
NDE1-207ENST00000573203 PIK3R4Q99570 1358 aa13.45□□□□□ -0.26
NDE1-207ENST00000573203 CCDC144AA2RUR9 1427 aa13.44□□□□□ -0.26
NDE1-207ENST00000573203 HSPA1LP34931 641 aa13.43□□□□□ -0.26
NDE1-207ENST00000573203 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
NDE1-207ENST00000573203 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
NDE1-207ENST00000573203 PPLO60437 1756 aa13.42□□□□□ -0.26
NDE1-207ENST00000573203 MSH6P52701 1360 aa13.42□□□□□ -0.26
NDE1-207ENST00000573203 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
NDE1-207ENST00000573203 AMOTL2Q9Y2J4 779 aa13.41□□□□□ -0.26
NDE1-207ENST00000573203 PTPRUQ92729 1446 aa13.4□□□□□ -0.26
NDE1-207ENST00000573203 NCOA3Q9Y6Q9 1424 aa13.39□□□□□ -0.27
NDE1-207ENST00000573203 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
NDE1-207ENST00000573203 RGL3Q3MIN7 710 aa13.39□□□□□ -0.27
NDE1-207ENST00000573203 METP08581 1390 aa13.39□□□□□ -0.27
NDE1-207ENST00000573203 XRN1Q8IZH2 1706 aaKnown RBP13.39□□□□□ -0.27
NDE1-207ENST00000573203 DISP3Q9P2K9 1392 aa13.38□□□□□ -0.27
NDE1-207ENST00000573203 HRCP23327 699 aa13.37□□□□□ -0.27
NDE1-207ENST00000573203 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
NDE1-207ENST00000573203 SPATA31E1Q6ZUB1 1445 aa13.37□□□□□ -0.27
NDE1-207ENST00000573203 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.36□□□□□ -0.27
NDE1-207ENST00000573203 IFT172Q9UG01 1749 aa13.36□□□□□ -0.27
NDE1-207ENST00000573203 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
NDE1-207ENST00000573203 FAM135BQ49AJ0 1406 aa13.36□□□□□ -0.27
NDE1-207ENST00000573203 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
NDE1-207ENST00000573203 C19orf44Q9H6X5 657 aa13.35□□□□□ -0.27
NDE1-207ENST00000573203 SLAIN2Q9P270 581 aa13.35□□□□□ -0.27
NDE1-207ENST00000573203 ANKRD30BQ9BXX2 1392 aa13.34□□□□□ -0.27
NDE1-207ENST00000573203 ATF3P18847 181 aa13.34□□□□□ -0.27
NDE1-207ENST00000573203 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
NDE1-207ENST00000573203 ADGRF5Q8IZF2 1346 aa13.33□□□□□ -0.28
NDE1-207ENST00000573203 MED1Q15648 1581 aaPredicted RBP13.3□□□□□ -0.28
NDE1-207ENST00000573203 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
NDE1-207ENST00000573203 DCCP43146 1447 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms