RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 CARD11Q9BXL7 1154 aa8.6□□□□□ -1.03
TRAPPC1-204ENST00000571947 TMEM131LA2VDJ0 1609 aa8.6□□□□□ -1.03
TRAPPC1-204ENST00000571947 ROCK2O75116 1388 aaKnown RBP8.6□□□□□ -1.03
TRAPPC1-204ENST00000571947 C11orf95C9JLR9 678 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC1-204ENST00000571947 MYO3AQ8NEV4 1616 aa8.58□□□□□ -1.04
TRAPPC1-204ENST00000571947 NRXN1Q9ULB1 1477 aa8.58□□□□□ -1.04
TRAPPC1-204ENST00000571947 ARID4BQ4LE39 1312 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC1-204ENST00000571947 SETBP1Q9Y6X0 1596 aa8.58□□□□□ -1.04
TRAPPC1-204ENST00000571947 NEXMIFQ5QGS0 1516 aa8.58□□□□□ -1.04
TRAPPC1-204ENST00000571947 FER1L4A9Z1Z3 1794 aa8.58□□□□□ -1.04
TRAPPC1-204ENST00000571947 KIF7Q2M1P5 1343 aa8.57□□□□□ -1.04
TRAPPC1-204ENST00000571947 SPATA31D1Q6ZQQ2 1576 aa8.57□□□□□ -1.04
TRAPPC1-204ENST00000571947 KDM5AP29375 1690 aaKnown RBP8.57□□□□□ -1.04
TRAPPC1-204ENST00000571947 NBPF1Q3BBV0 1214 aa8.57□□□□□ -1.04
TRAPPC1-204ENST00000571947 ERVK-7P63135 1459 aa8.57□□□□□ -1.04
TRAPPC1-204ENST00000571947 RPGRIP1LQ68CZ1 1315 aa8.55□□□□□ -1.04
TRAPPC1-204ENST00000571947 ST20-MTHFSA0A0A6YYL1 179 aa8.55□□□□□ -1.04
TRAPPC1-204ENST00000571947 ANP32CO43423 234 aa8.55□□□□□ -1.04
TRAPPC1-204ENST00000571947 C3P01024 1663 aa8.55□□□□□ -1.04
TRAPPC1-204ENST00000571947 QRICH2Q9H0J4 1663 aa8.55□□□□□ -1.04
TRAPPC1-204ENST00000571947 ARHGEF28Q8N1W1 1705 aaKnown RBP8.54□□□□□ -1.04
TRAPPC1-204ENST00000571947 SCAF11Q99590 1463 aaKnown RBP8.54□□□□□ -1.04
TRAPPC1-204ENST00000571947 CCER2I3L3R5 266 aa8.54□□□□□ -1.04
TRAPPC1-204ENST00000571947 PPP4R3CPQ6ZMV5 832 aa8.54□□□□□ -1.04
TRAPPC1-204ENST00000571947 SLC52A1Q9NWF4 448 aa8.54□□□□□ -1.04
TRAPPC1-204ENST00000571947 MYOM1P52179 1685 aa8.53□□□□□ -1.04
TRAPPC1-204ENST00000571947 CHGAP10645 457 aaKnown RBP8.53□□□□□ -1.04
TRAPPC1-204ENST00000571947 UBR1Q8IWV7 1749 aa8.53□□□□□ -1.04
TRAPPC1-204ENST00000571947 PIK3C2GO75747 1445 aa8.53□□□□□ -1.04
TRAPPC1-204ENST00000571947 ZFYVE9O95405 1425 aa8.53□□□□□ -1.04
TRAPPC1-204ENST00000571947 ADGRF5Q8IZF2 1346 aa8.53□□□□□ -1.04
TRAPPC1-204ENST00000571947 SETD1AO15047 1707 aaKnown RBP8.52□□□□□ -1.05
TRAPPC1-204ENST00000571947 CENPBP07199 599 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC1-204ENST00000571947 IDI1Q13907 227 aa8.52□□□□□ -1.05
TRAPPC1-204ENST00000571947 DNAJC5Q9H3Z4 198 aa8.52□□□□□ -1.05
TRAPPC1-204ENST00000571947 ADGRB1O14514 1584 aa8.51□□□□□ -1.05
TRAPPC1-204ENST00000571947 EIF3AQ14152 1382 aaKnown RBP8.5□□□□□ -1.05
TRAPPC1-204ENST00000571947 TRHP20396 242 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC1-204ENST00000571947 MLECQ14165 292 aa8.5□□□□□ -1.05
TRAPPC1-204ENST00000571947 CFAP70Q5T0N1 1121 aa8.5□□□□□ -1.05
TRAPPC1-204ENST00000571947 FBXO31Q5XUX0 539 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC1-204ENST00000571947 TESK2Q96S53 571 aa8.5□□□□□ -1.05
TRAPPC1-204ENST00000571947 YTHDC1Q96MU7 727 aaKnown RBP8.49□□□□□ -1.05
TRAPPC1-204ENST00000571947 C14orf93Q9H972 538 aaKnown RBP8.49□□□□□ -1.05
TRAPPC1-204ENST00000571947 ZMYM3Q14202 1370 aa8.48□□□□□ -1.05
TRAPPC1-204ENST00000571947 DISP3Q9P2K9 1392 aa8.48□□□□□ -1.05
TRAPPC1-204ENST00000571947 VGFO15240 615 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC1-204ENST00000571947 TMF1P82094 1093 aa8.48□□□□□ -1.05
TRAPPC1-204ENST00000571947 POLR3GLQ9BT43 218 aa8.48□□□□□ -1.05
TRAPPC1-204ENST00000571947 ESF1Q9H501 851 aaKnown RBP8.48□□□□□ -1.05
TRAPPC1-204ENST00000571947 A2ML1A8K2U0 1454 aa8.48□□□□□ -1.05
TRAPPC1-204ENST00000571947 ASXL1Q8IXJ9 1541 aa8.48□□□□□ -1.05
TRAPPC1-204ENST00000571947 ALKQ9UM73 1620 aa8.47□□□□□ -1.05
TRAPPC1-204ENST00000571947 RIMS1Q86UR5 1692 aaKnown RBP8.47□□□□□ -1.05
TRAPPC1-204ENST00000571947 KNDC1Q76NI1 1749 aa8.47□□□□□ -1.05
TRAPPC1-204ENST00000571947 PRKRIP1Q9H875 184 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC1-204ENST00000571947 SBNO2Q9Y2G9 1366 aa8.47□□□□□ -1.05
TRAPPC1-204ENST00000571947 NRXN3Q9Y4C0 1643 aa8.47□□□□□ -1.05
TRAPPC1-204ENST00000571947 SETD1BQ9UPS6 1966 aaKnown RBP8.46□□□□□ -1.05
TRAPPC1-204ENST00000571947 SLC24A1O60721 1099 aa8.46□□□□□ -1.06
TRAPPC1-204ENST00000571947 ADAMTSL3P82987 1691 aa8.45□□□□□ -1.06
TRAPPC1-204ENST00000571947 TNRQ92752 1358 aa8.45□□□□□ -1.06
TRAPPC1-204ENST00000571947 RIMS2Q9UQ26 1411 aa8.45□□□□□ -1.06
TRAPPC1-204ENST00000571947 CDCA8Q53HL2 280 aa8.44□□□□□ -1.06
TRAPPC1-204ENST00000571947 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
TRAPPC1-204ENST00000571947 NLRP1Q9C000 1473 aa8.44□□□□□ -1.06
TRAPPC1-204ENST00000571947 STAG3Q9UJ98 1225 aa8.43□□□□□ -1.06
TRAPPC1-204ENST00000571947 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC1-204ENST00000571947 CENPJQ9HC77 1338 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC1-204ENST00000571947 DLC1Q96QB1 1528 aa8.42□□□□□ -1.06
TRAPPC1-204ENST00000571947 ZNF142P52746 1687 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC1-204ENST00000571947 ANKRD26Q9UPS8 1709 aa8.41□□□□□ -1.06
TRAPPC1-204ENST00000571947 USP32Q8NFA0 1604 aa8.41□□□□□ -1.06
TRAPPC1-204ENST00000571947 PTPRMP28827 1452 aa8.41□□□□□ -1.06
TRAPPC1-204ENST00000571947 PER1O15534 1290 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC1-204ENST00000571947 TMEM132EQ6IEE7 984 aa8.41□□□□□ -1.06
TRAPPC1-204ENST00000571947 TRAK1Q9UPV9 953 aa8.41□□□□□ -1.06
TRAPPC1-204ENST00000571947 TULP4Q9NRJ4 1543 aa8.4□□□□□ -1.06
TRAPPC1-204ENST00000571947 YTHDC2Q9H6S0 1430 aaKnown RBP8.4□□□□□ -1.06
TRAPPC1-204ENST00000571947 RALBP1Q15311 655 aa8.4□□□□□ -1.06
TRAPPC1-204ENST00000571947 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRAPPC1-204ENST00000571947 CNKSR2Q8WXI2 1034 aa8.4□□□□□ -1.06
TRAPPC1-204ENST00000571947 PANK3Q9H999 370 aa8.4□□□□□ -1.06
TRAPPC1-204ENST00000571947 SLIT1O75093 1534 aa8.39□□□□□ -1.07
TRAPPC1-204ENST00000571947 PARD3Q8TEW0 1356 aa8.39□□□□□ -1.07
TRAPPC1-204ENST00000571947 HDGFP51858 240 aaKnown RBP8.39□□□□□ -1.07
TRAPPC1-204ENST00000571947 CCDC184Q52MB2 194 aa8.39□□□□□ -1.07
TRAPPC1-204ENST00000571947 KIF20BQ96Q89 1820 aa8.38□□□□□ -1.07
TRAPPC1-204ENST00000571947 TMEM2Q9UHN6 1383 aa8.38□□□□□ -1.07
TRAPPC1-204ENST00000571947 PUS7Q96PZ0 661 aaKnown RBP8.38□□□□□ -1.07
TRAPPC1-204ENST00000571947 MRS2Q9HD23 443 aa8.38□□□□□ -1.07
TRAPPC1-204ENST00000571947 CEP170BQ9Y4F5 1589 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC1-204ENST00000571947 CPS1P31327 1500 aa8.38□□□□□ -1.07
TRAPPC1-204ENST00000571947 ARHGAP23Q9P227 1491 aa8.38□□□□□ -1.07
TRAPPC1-204ENST00000571947 BRD4O60885 1362 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC1-204ENST00000571947 LRPPRCP42704 1394 aaKnown RBP8.37□□□□□ -1.07
TRAPPC1-204ENST00000571947 MYBBP1AQ9BQG0 1328 aaKnown RBP8.37□□□□□ -1.07
TRAPPC1-204ENST00000571947 AKAP12Q02952 1782 aa8.37□□□□□ -1.07
TRAPPC1-204ENST00000571947 ITSN1Q15811 1721 aa8.37□□□□□ -1.07
TRAPPC1-204ENST00000571947 NPC1L1Q9UHC9 1359 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms