RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 BCANQ96GW7 911 aa32.72■■■□□ 2.83
UBFD1-210ENST00000571064 SLAIN2Q9P270 581 aa32.72■■■□□ 2.83
UBFD1-210ENST00000571064 CHIC2Q9UKJ5 165 aa32.7■■■□□ 2.83
UBFD1-210ENST00000571064 NOS1P29475 1434 aa32.69■■■□□ 2.82
UBFD1-210ENST00000571064 PHLPP1O60346 1717 aa32.69■■■□□ 2.82
UBFD1-210ENST00000571064 ADGRB3O60242 1522 aa32.69■■■□□ 2.82
UBFD1-210ENST00000571064 JCADQ9P266 1359 aa32.69■■■□□ 2.82
UBFD1-210ENST00000571064 ANKRD30AQ9BXX3 1397 aa32.63■■■□□ 2.81
UBFD1-210ENST00000571064 SLC52A1Q9NWF4 448 aa32.63■■■□□ 2.81
UBFD1-210ENST00000571064 ITGAEP38570 1179 aa32.6■■■□□ 2.81
UBFD1-210ENST00000571064 COL16A1Q07092 1604 aaPredicted RBP32.58■■■□□ 2.81
UBFD1-210ENST00000571064 ZFYVE9O95405 1425 aa32.57■■■□□ 2.8
UBFD1-210ENST00000571064 PLEKHG1Q9ULL1 1385 aa32.57■■■□□ 2.8
UBFD1-210ENST00000571064 CHD2O14647 1828 aaKnown RBP32.56■■■□□ 2.8
UBFD1-210ENST00000571064 LRP6O75581 1613 aa32.55■■■□□ 2.8
UBFD1-210ENST00000571064 ADGRL2O95490 1459 aa32.55■■■□□ 2.8
UBFD1-210ENST00000571064 PPP1R15AO75807 674 aaPredicted RBP32.54■■■□□ 2.8
UBFD1-210ENST00000571064 RIMS2Q9UQ26 1411 aa32.52■■■□□ 2.8
UBFD1-210ENST00000571064 MYO5BQ9ULV0 1848 aa32.52■■■□□ 2.8
UBFD1-210ENST00000571064 MEX3CQ5U5Q3 659 aaKnown RBP32.51■■■□□ 2.79
UBFD1-210ENST00000571064 C14orf37Q86TY3 774 aa32.5■■■□□ 2.79
UBFD1-210ENST00000571064 UPF1Q92900 1129 aaKnown RBP eCLIP32.5■■■□□ 2.79
UBFD1-210ENST00000571064 TRIM52Q96A61 297 aa32.5■■■□□ 2.79
UBFD1-210ENST00000571064 SPATA31A6Q5VVP1 1343 aa32.5■■■□□ 2.79
UBFD1-210ENST00000571064 TBX22Q9Y458 520 aa32.48■■■□□ 2.79
UBFD1-210ENST00000571064 RPRD2Q5VT52 1461 aaKnown RBP32.48■■■□□ 2.79
UBFD1-210ENST00000571064 HDGFP51858 240 aaKnown RBP32.47■■■□□ 2.79
UBFD1-210ENST00000571064 ZNF772Q68DY9 489 aaPredicted RBP32.47■■■□□ 2.79
UBFD1-210ENST00000571064 GCC2Q8IWJ2 1684 aa32.46■■■□□ 2.79
UBFD1-210ENST00000571064 ROCK1Q13464 1354 aa32.45■■■□□ 2.79
UBFD1-210ENST00000571064 NCOA3Q9Y6Q9 1424 aa32.45■■■□□ 2.79
UBFD1-210ENST00000571064 TMEM131LA2VDJ0 1609 aa32.44■■■□□ 2.78
UBFD1-210ENST00000571064 NUTM2DQ5VT03 806 aaPredicted RBP32.43■■■□□ 2.78
UBFD1-210ENST00000571064 CHGAP10645 457 aaKnown RBP32.41■■■□□ 2.78
UBFD1-210ENST00000571064 CADPS2Q86UW7 1296 aa32.41■■■□□ 2.78
UBFD1-210ENST00000571064 AHDC1Q5TGY3 1603 aaPredicted RBP32.4■■■□□ 2.78
UBFD1-210ENST00000571064 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.4■■■□□ 2.78
UBFD1-210ENST00000571064 ATF3P18847 181 aa32.4■■■□□ 2.78
UBFD1-210ENST00000571064 C19orf44Q9H6X5 657 aa32.4■■■□□ 2.78
UBFD1-210ENST00000571064 ADAMTS13Q76LX8 1427 aa32.4■■■□□ 2.78
UBFD1-210ENST00000571064 ANKRD50Q9ULJ7 1429 aa32.4■■■□□ 2.78
UBFD1-210ENST00000571064 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.38■■■□□ 2.77
UBFD1-210ENST00000571064 SHPRHQ149N8 1683 aa32.37■■■□□ 2.77
UBFD1-210ENST00000571064 RXRBP28702 533 aa32.35■■■□□ 2.77
UBFD1-210ENST00000571064 NUTM2BA6NNL0 878 aaPredicted RBP32.34■■■□□ 2.77
UBFD1-210ENST00000571064 NUTM2EB1AL46 878 aaPredicted RBP32.34■■■□□ 2.77
UBFD1-210ENST00000571064 NUTM2AQ8IVF1 878 aaPredicted RBP32.34■■■□□ 2.77
UBFD1-210ENST00000571064 BRINP3Q76B58 766 aa32.33■■■□□ 2.77
UBFD1-210ENST00000571064 PIK3R4Q99570 1358 aa32.31■■■□□ 2.76
UBFD1-210ENST00000571064 DIP2AQ14689 1571 aa32.3■■■□□ 2.76
UBFD1-210ENST00000571064 NAIPQ13075 1403 aa32.29■■■□□ 2.76
UBFD1-210ENST00000571064 AMOTL2Q9Y2J4 779 aa32.29■■■□□ 2.76
UBFD1-210ENST00000571064 PTPRUQ92729 1446 aa32.27■■■□□ 2.76
UBFD1-210ENST00000571064 HFM1A2PYH4 1435 aa32.26■■■□□ 2.76
UBFD1-210ENST00000571064 AFF2P51816 1311 aa32.26■■■□□ 2.75
UBFD1-210ENST00000571064 E9PCH4 1651 aa32.24■■■□□ 2.75
UBFD1-210ENST00000571064 CDK12Q9NYV4 1490 aaPredicted RBP32.23■■■□□ 2.75
UBFD1-210ENST00000571064 TRPM2O94759 1503 aa32.23■■■□□ 2.75
UBFD1-210ENST00000571064 UNC13BO14795 1591 aa32.22■■■□□ 2.75
UBFD1-210ENST00000571064 TRIM26Q12899 539 aaPredicted RBP32.21■■■□□ 2.75
UBFD1-210ENST00000571064 ASXL1Q8IXJ9 1541 aa32.2■■■□□ 2.74
UBFD1-210ENST00000571064 SETD5Q9C0A6 1442 aa32.17■■■□□ 2.74
UBFD1-210ENST00000571064 DCCP43146 1447 aa32.17■■■□□ 2.74
UBFD1-210ENST00000571064 MST1RQ04912 1400 aa32.15■■■□□ 2.74
UBFD1-210ENST00000571064 C8orf37Q96NL8 207 aa32.13■■■□□ 2.73
UBFD1-210ENST00000571064 DDX17Q92841 729 aaKnown RBP32.12■■■□□ 2.73
UBFD1-210ENST00000571064 LRRC59Q96AG4 307 aaKnown RBP32.12■■■□□ 2.73
UBFD1-210ENST00000571064 NHSL1Q5SYE7 1610 aa32.11■■■□□ 2.73
UBFD1-210ENST00000571064 RGS12O14924 1447 aa32.11■■■□□ 2.73
UBFD1-210ENST00000571064 QTRT2Q9H974 415 aaKnown RBP32.11■■■□□ 2.73
UBFD1-210ENST00000571064 XRN1Q8IZH2 1706 aaKnown RBP32.11■■■□□ 2.73
UBFD1-210ENST00000571064 IQGAP3Q86VI3 1631 aa32.1■■■□□ 2.73
UBFD1-210ENST00000571064 NRXN3Q9Y4C0 1643 aa32.09■■■□□ 2.73
UBFD1-210ENST00000571064 RBM6P78332 1123 aaKnown RBP32.08■■■□□ 2.73
UBFD1-210ENST00000571064 PNPLA6Q8IY17 1366 aa32.07■■■□□ 2.72
UBFD1-210ENST00000571064 NUP155O75694 1391 aa32.06■■■□□ 2.72
UBFD1-210ENST00000571064 METP08581 1390 aa32.06■■■□□ 2.72
UBFD1-210ENST00000571064 SETBP1Q9Y6X0 1596 aa32.04■■■□□ 2.72
UBFD1-210ENST00000571064 RAB3GAP2Q9H2M9 1393 aa32.01■■■□□ 2.71
UBFD1-210ENST00000571064 ADAMTS2O95450 1211 aa32■■■□□ 2.71
UBFD1-210ENST00000571064 ZNF326Q5BKZ1 582 aaKnown RBP32■■■□□ 2.71
UBFD1-210ENST00000571064 ADGRL3Q9HAR2 1447 aa32■■■□□ 2.71
UBFD1-210ENST00000571064 NGLY1Q96IV0 654 aa31.98■■■□□ 2.71
UBFD1-210ENST00000571064 NALCNQ8IZF0 1738 aa31.95■■■□□ 2.7
UBFD1-210ENST00000571064 SRCAPQ6ZRS2 3230 aa31.93■■■□□ 2.7
UBFD1-210ENST00000571064 C1orf167Q5SNV9 1468 aa31.91■■■□□ 2.7
UBFD1-210ENST00000571064 SPHKAPQ2M3C7 1700 aa31.9■■■□□ 2.7
UBFD1-210ENST00000571064 ATAD2Q6PL18 1390 aa31.89■■■□□ 2.7
UBFD1-210ENST00000571064 HRCP23327 699 aa31.88■■■□□ 2.69
UBFD1-210ENST00000571064 USP21Q9UK80 565 aa31.88■■■□□ 2.69
UBFD1-210ENST00000571064 ORAI2Q96SN7 254 aa31.86■■■□□ 2.69
UBFD1-210ENST00000571064 PCGF6Q9BYE7 350 aa31.86■■■□□ 2.69
UBFD1-210ENST00000571064 SOS2Q07890 1332 aaPredicted RBP31.84■■■□□ 2.69
UBFD1-210ENST00000571064 NEXMIFQ5QGS0 1516 aa31.84■■■□□ 2.69
UBFD1-210ENST00000571064 TRPC5Q9UL62 973 aaPredicted RBP31.83■■■□□ 2.69
UBFD1-210ENST00000571064 LAMC1P11047 1609 aa31.82■■■□□ 2.69
UBFD1-210ENST00000571064 FNBP4Q8N3X1 1017 aaPredicted RBP31.8■■■□□ 2.68
UBFD1-210ENST00000571064 CLTCL1P53675 1640 aa31.79■■■□□ 2.68
UBFD1-210ENST00000571064 ACIN1Q9UKV3 1341 aaKnown RBP31.78■■■□□ 2.68
UBFD1-210ENST00000571064 ROBO2Q9HCK4 1378 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms