RNA–Protein interactions for RNA: ENST00000570692.1

TVP23A-203, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 4

Gene TVP23A, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-203ENST00000570692 LMTK2Q8IWU2 1503 aa24.23■■□□□ 1.47
TVP23A-203ENST00000570692 NOS1P29475 1434 aa24.22■■□□□ 1.47
TVP23A-203ENST00000570692 VPS8Q8N3P4 1428 aa24.22■■□□□ 1.47
TVP23A-203ENST00000570692 SPATA31A6Q5VVP1 1343 aa24.22■■□□□ 1.47
TVP23A-203ENST00000570692 CROCC2H7BZ55 1655 aa24.2■■□□□ 1.46
TVP23A-203ENST00000570692 FGD6Q6ZV73 1430 aa24.18■■□□□ 1.46
TVP23A-203ENST00000570692 SLC52A1Q9NWF4 448 aa24.18■■□□□ 1.46
TVP23A-203ENST00000570692 CHIC2Q9UKJ5 165 aa24.17■■□□□ 1.46
TVP23A-203ENST00000570692 PLEKHG1Q9ULL1 1385 aa24.16■■□□□ 1.46
TVP23A-203ENST00000570692 RXRBP28702 533 aa24.16■■□□□ 1.46
TVP23A-203ENST00000570692 C14orf37Q86TY3 774 aa24.16■■□□□ 1.46
TVP23A-203ENST00000570692 ZFYVE9O95405 1425 aa24.16■■□□□ 1.46
TVP23A-203ENST00000570692 DAPK1P53355 1430 aa24.16■■□□□ 1.46
TVP23A-203ENST00000570692 CHD2O14647 1828 aaKnown RBP24.15■■□□□ 1.46
TVP23A-203ENST00000570692 SRCAPQ6ZRS2 3230 aa24.14■■□□□ 1.46
TVP23A-203ENST00000570692 PPP1R15AO75807 674 aaPredicted RBP24.14■■□□□ 1.45
TVP23A-203ENST00000570692 PTPN23Q9H3S7 1636 aa24.13■■□□□ 1.45
TVP23A-203ENST00000570692 RIMS2Q9UQ26 1411 aa24.12■■□□□ 1.45
TVP23A-203ENST00000570692 AHDC1Q5TGY3 1603 aaPredicted RBP24.11■■□□□ 1.45
TVP23A-203ENST00000570692 NUTM2BA6NNL0 878 aaPredicted RBP24.11■■□□□ 1.45
TVP23A-203ENST00000570692 NUTM2EB1AL46 878 aaPredicted RBP24.11■■□□□ 1.45
TVP23A-203ENST00000570692 NUTM2AQ8IVF1 878 aaPredicted RBP24.11■■□□□ 1.45
TVP23A-203ENST00000570692 TBX22Q9Y458 520 aa24.11■■□□□ 1.45
TVP23A-203ENST00000570692 ANKRD30AQ9BXX3 1397 aa24.11■■□□□ 1.45
TVP23A-203ENST00000570692 NCOA3Q9Y6Q9 1424 aa24.1■■□□□ 1.45
TVP23A-203ENST00000570692 CADPS2Q86UW7 1296 aa24.1■■□□□ 1.45
TVP23A-203ENST00000570692 SHPRHQ149N8 1683 aa24.1■■□□□ 1.45
TVP23A-203ENST00000570692 ATF3P18847 181 aa24.09■■□□□ 1.45
TVP23A-203ENST00000570692 C19orf44Q9H6X5 657 aa24.08■■□□□ 1.45
TVP23A-203ENST00000570692 HDGFP51858 240 aaKnown RBP24.07■■□□□ 1.44
TVP23A-203ENST00000570692 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.07■■□□□ 1.44
TVP23A-203ENST00000570692 NUTM2DQ5VT03 806 aaPredicted RBP24.06■■□□□ 1.44
TVP23A-203ENST00000570692 AFF2P51816 1311 aa24.06■■□□□ 1.44
TVP23A-203ENST00000570692 CDK12Q9NYV4 1490 aaPredicted RBP24.06■■□□□ 1.44
TVP23A-203ENST00000570692 MYO5BQ9ULV0 1848 aa24.05■■□□□ 1.44
TVP23A-203ENST00000570692 BRINP3Q76B58 766 aa24.05■■□□□ 1.44
TVP23A-203ENST00000570692 DIP2AQ14689 1571 aa24.04■■□□□ 1.44
TVP23A-203ENST00000570692 ADAMTS13Q76LX8 1427 aa24.04■■□□□ 1.44
TVP23A-203ENST00000570692 TMEM131LA2VDJ0 1609 aa24.03■■□□□ 1.44
TVP23A-203ENST00000570692 GCC2Q8IWJ2 1684 aa24.03■■□□□ 1.44
TVP23A-203ENST00000570692 RPRD2Q5VT52 1461 aaKnown RBP24.02■■□□□ 1.44
TVP23A-203ENST00000570692 CHGAP10645 457 aaKnown RBP24.02■■□□□ 1.44
TVP23A-203ENST00000570692 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
TVP23A-203ENST00000570692 ABCF1Q8NE71 845 aaKnown RBP eCLIP24■■□□□ 1.43
TVP23A-203ENST00000570692 RGS12O14924 1447 aa23.98■■□□□ 1.43
TVP23A-203ENST00000570692 PIK3R4Q99570 1358 aa23.97■■□□□ 1.43
TVP23A-203ENST00000570692 AMOTL2Q9Y2J4 779 aa23.97■■□□□ 1.43
TVP23A-203ENST00000570692 PTPRUQ92729 1446 aa23.96■■□□□ 1.43
TVP23A-203ENST00000570692 QTRT2Q9H974 415 aaKnown RBP23.96■■□□□ 1.43
TVP23A-203ENST00000570692 C8orf37Q96NL8 207 aa23.95■■□□□ 1.42
TVP23A-203ENST00000570692 ASXL1Q8IXJ9 1541 aa23.94■■□□□ 1.42
TVP23A-203ENST00000570692 SETD5Q9C0A6 1442 aa23.94■■□□□ 1.42
TVP23A-203ENST00000570692 ADGRL2O95490 1459 aa23.94■■□□□ 1.42
TVP23A-203ENST00000570692 RBM6P78332 1123 aaKnown RBP23.93■■□□□ 1.42
TVP23A-203ENST00000570692 ANKRD50Q9ULJ7 1429 aa23.93■■□□□ 1.42
TVP23A-203ENST00000570692 DDX17Q92841 729 aaKnown RBP23.91■■□□□ 1.42
TVP23A-203ENST00000570692 TRPM2O94759 1503 aa23.9■■□□□ 1.42
TVP23A-203ENST00000570692 LRRC59Q96AG4 307 aaKnown RBP23.9■■□□□ 1.42
TVP23A-203ENST00000570692 MST1RQ04912 1400 aa23.9■■□□□ 1.42
TVP23A-203ENST00000570692 APLP2Q06481 763 aa23.89■■□□□ 1.41
TVP23A-203ENST00000570692 DCCP43146 1447 aa23.89■■□□□ 1.41
TVP23A-203ENST00000570692 NHSL1Q5SYE7 1610 aa23.87■■□□□ 1.41
TVP23A-203ENST00000570692 PNPLA6Q8IY17 1366 aa23.87■■□□□ 1.41
TVP23A-203ENST00000570692 FAM50AQ14320 339 aaKnown RBP23.85■■□□□ 1.41
TVP23A-203ENST00000570692 UNC13BO14795 1591 aa23.85■■□□□ 1.41
TVP23A-203ENST00000570692 ADAMTS2O95450 1211 aa23.84■■□□□ 1.41
TVP23A-203ENST00000570692 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
TVP23A-203ENST00000570692 E9PCH4 1651 aa23.83■■□□□ 1.4
TVP23A-203ENST00000570692 ATAD2Q6PL18 1390 aa23.81■■□□□ 1.4
TVP23A-203ENST00000570692 XRN1Q8IZH2 1706 aaKnown RBP23.81■■□□□ 1.4
TVP23A-203ENST00000570692 NRXN3Q9Y4C0 1643 aa23.78■■□□□ 1.4
TVP23A-203ENST00000570692 METP08581 1390 aa23.78■■□□□ 1.4
TVP23A-203ENST00000570692 ZRANB1Q9UGI0 708 aa23.77■■□□□ 1.4
TVP23A-203ENST00000570692 USP21Q9UK80 565 aa23.76■■□□□ 1.39
TVP23A-203ENST00000570692 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
TVP23A-203ENST00000570692 SETBP1Q9Y6X0 1596 aa23.74■■□□□ 1.39
TVP23A-203ENST00000570692 EP400Q96L91 3159 aa23.73■■□□□ 1.39
TVP23A-203ENST00000570692 TRPC5Q9UL62 973 aaPredicted RBP23.72■■□□□ 1.39
TVP23A-203ENST00000570692 IQGAP3Q86VI3 1631 aa23.7■■□□□ 1.39
TVP23A-203ENST00000570692 C1orf167Q5SNV9 1468 aa23.7■■□□□ 1.38
TVP23A-203ENST00000570692 NALCNQ8IZF0 1738 aa23.7■■□□□ 1.38
TVP23A-203ENST00000570692 FOXD1Q16676 465 aa23.69■■□□□ 1.38
TVP23A-203ENST00000570692 ZNF326Q5BKZ1 582 aaKnown RBP23.69■■□□□ 1.38
TVP23A-203ENST00000570692 FNBP4Q8N3X1 1017 aaPredicted RBP23.69■■□□□ 1.38
TVP23A-203ENST00000570692 NUP155O75694 1391 aa23.68■■□□□ 1.38
TVP23A-203ENST00000570692 ORAI2Q96SN7 254 aa23.68■■□□□ 1.38
TVP23A-203ENST00000570692 SOS2Q07890 1332 aaPredicted RBP23.67■■□□□ 1.38
TVP23A-203ENST00000570692 ATRNO75882 1429 aa23.67■■□□□ 1.38
TVP23A-203ENST00000570692 PTCH1Q13635 1447 aa23.65■■□□□ 1.38
TVP23A-203ENST00000570692 LAMC1P11047 1609 aa23.63■■□□□ 1.37
TVP23A-203ENST00000570692 CCDC125Q86Z20 511 aa23.61■■□□□ 1.37
TVP23A-203ENST00000570692 ROCK1Q13464 1354 aa23.6■■□□□ 1.37
TVP23A-203ENST00000570692 BCL9LQ86UU0 1499 aa23.58■■□□□ 1.37
TVP23A-203ENST00000570692 ROBO2Q9HCK4 1378 aa23.57■■□□□ 1.36
TVP23A-203ENST00000570692 NEXMIFQ5QGS0 1516 aa23.56■■□□□ 1.36
TVP23A-203ENST00000570692 MYOM2P54296 1465 aa23.56■■□□□ 1.36
TVP23A-203ENST00000570692 COL22A1Q8NFW1 1626 aaPredicted RBP23.55■■□□□ 1.36
TVP23A-203ENST00000570692 SPHKAPQ2M3C7 1700 aa23.55■■□□□ 1.36
TVP23A-203ENST00000570692 GJD4Q96KN9 370 aaPredicted RBP23.54■■□□□ 1.36
TVP23A-203ENST00000570692 ITGAEP38570 1179 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms