RNA–Protein interactions for RNA: ENST00000569796.1

E4F1-209, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 5,931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-209ENST00000569796 RAPGEF2Q9Y4G8 1499 aa20.82■□□□□ 0.92
E4F1-209ENST00000569796 DDX11L8A8MPP1 907 aa20.82■□□□□ 0.92
E4F1-209ENST00000569796 ZKSCAN2Q63HK3 967 aa20.82■□□□□ 0.92
E4F1-209ENST00000569796 APPP05067 770 aa20.8■□□□□ 0.92
E4F1-209ENST00000569796 VPS37DQ86XT2 251 aa20.8■□□□□ 0.92
E4F1-209ENST00000569796 PATL2C9JE40 543 aaKnown RBP20.8■□□□□ 0.92
E4F1-209ENST00000569796 PLIN1O60240 522 aa20.8■□□□□ 0.92
E4F1-209ENST00000569796 PSME1Q06323 249 aa20.8■□□□□ 0.92
E4F1-209ENST00000569796 DHX16O60231 1041 aaKnown RBP20.79■□□□□ 0.92
E4F1-209ENST00000569796 ATP6V1DQ9Y5K8 247 aa20.79■□□□□ 0.92
E4F1-209ENST00000569796 GPS2Q13227 327 aa20.79■□□□□ 0.92
E4F1-209ENST00000569796 GSE1Q14687 1217 aa20.78■□□□□ 0.92
E4F1-209ENST00000569796 KLHL34Q8N239 644 aa20.78■□□□□ 0.92
E4F1-209ENST00000569796 TPM1P09493 284 aa20.77■□□□□ 0.92
E4F1-209ENST00000569796 CCAR2Q8N163 923 aaKnown RBP20.77■□□□□ 0.92
E4F1-209ENST00000569796 E9PSI1 815 aa20.77■□□□□ 0.91
E4F1-209ENST00000569796 GOLGA6L19H0YKK7 550 aa20.77■□□□□ 0.91
E4F1-209ENST00000569796 CPLX2Q6PUV4 134 aaKnown RBP20.76■□□□□ 0.91
E4F1-209ENST00000569796 TRIM29Q14134 588 aa20.76■□□□□ 0.91
E4F1-209ENST00000569796 IFIT2P09913 472 aaKnown RBP20.76■□□□□ 0.91
E4F1-209ENST00000569796 BECN2A8MW95 431 aa20.75■□□□□ 0.91
E4F1-209ENST00000569796 CENPQQ7L2Z9 268 aaPredicted RBP20.75■□□□□ 0.91
E4F1-209ENST00000569796 RUFY2Q8WXA3 655 aa20.75■□□□□ 0.91
E4F1-209ENST00000569796 COG6Q9Y2V7 657 aa20.75■□□□□ 0.91
E4F1-209ENST00000569796 DIAPH1O60610 1272 aaKnown RBP20.74■□□□□ 0.91
E4F1-209ENST00000569796 ANO2Q9NQ90 1003 aa20.74■□□□□ 0.91
E4F1-209ENST00000569796 AEBP2Q6ZN18 517 aaPredicted RBP20.73■□□□□ 0.91
E4F1-209ENST00000569796 DDX49Q9Y6V7 483 aaKnown RBP20.73■□□□□ 0.91
E4F1-209ENST00000569796 DDX58O95786 925 aaKnown RBP20.72■□□□□ 0.91
E4F1-209ENST00000569796 PCMTD1Q96MG8 357 aaPredicted RBP20.72■□□□□ 0.91
E4F1-209ENST00000569796 CCDC47Q96A33 483 aaKnown RBP20.72■□□□□ 0.91
E4F1-209ENST00000569796 CPLX1O14810 134 aa20.71■□□□□ 0.91
E4F1-209ENST00000569796 ZKSCAN1P17029 563 aaPredicted RBP20.71■□□□□ 0.91
E4F1-209ENST00000569796 APAF1O14727 1248 aa20.71■□□□□ 0.91
E4F1-209ENST00000569796 SAMD1Q6SPF0 538 aaPredicted RBP20.71■□□□□ 0.91
E4F1-209ENST00000569796 PTPRGP23470 1445 aa20.71■□□□□ 0.91
E4F1-209ENST00000569796 CRBNQ96SW2 442 aa20.7■□□□□ 0.9
E4F1-209ENST00000569796 FAM13BQ9NYF5 915 aa20.7■□□□□ 0.9
E4F1-209ENST00000569796 FKBP5Q13451 457 aaPredicted RBP20.7■□□□□ 0.9
E4F1-209ENST00000569796 CWC22Q9HCG8 908 aaKnown RBP20.7■□□□□ 0.9
E4F1-209ENST00000569796 RIPK4P57078 832 aa20.7■□□□□ 0.9
E4F1-209ENST00000569796 TEX35Q5T0J7 233 aa20.7■□□□□ 0.9
E4F1-209ENST00000569796 CCDC70Q6NSX1 233 aa20.7■□□□□ 0.9
E4F1-209ENST00000569796 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
E4F1-209ENST00000569796 SLC4A3P48751 1232 aa20.69■□□□□ 0.9
E4F1-209ENST00000569796 FAM161AQ3B820 660 aa20.69■□□□□ 0.9
E4F1-209ENST00000569796 G3BP1Q13283 466 aaKnown RBP eCLIP20.69■□□□□ 0.9
E4F1-209ENST00000569796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.69■□□□□ 0.9
E4F1-209ENST00000569796 SKOR2Q2VWA4 1001 aaPredicted RBP20.69■□□□□ 0.9
E4F1-209ENST00000569796 TRDNQ13061 729 aa20.68■□□□□ 0.9
E4F1-209ENST00000569796 NFXL1Q6ZNB6 911 aa20.68■□□□□ 0.9
E4F1-209ENST00000569796 ZNF592Q92610 1267 aa20.68■□□□□ 0.9
E4F1-209ENST00000569796 EXOC6Q8TAG9 804 aa20.68■□□□□ 0.9
E4F1-209ENST00000569796 USP47Q96K76 1375 aa20.67■□□□□ 0.9
E4F1-209ENST00000569796 CNKSR2Q8WXI2 1034 aa20.66■□□□□ 0.9
E4F1-209ENST00000569796 RBM33Q96EV2 1170 aaKnown RBP20.66■□□□□ 0.9
E4F1-209ENST00000569796 ROCK1Q13464 1354 aa20.66■□□□□ 0.9
E4F1-209ENST00000569796 REC8O95072 547 aa20.66■□□□□ 0.9
E4F1-209ENST00000569796 RRP1P56182 461 aaKnown RBP20.66■□□□□ 0.9
E4F1-209ENST00000569796 DDX19BQ9UMR2 479 aa20.65■□□□□ 0.9
E4F1-209ENST00000569796 RAPGEF4Q8WZA2 1011 aa20.65■□□□□ 0.9
E4F1-209ENST00000569796 API5Q9BZZ5 524 aaKnown RBP20.65■□□□□ 0.9
E4F1-209ENST00000569796 ATF3P18847 181 aa20.65■□□□□ 0.9
E4F1-209ENST00000569796 FBXO3Q9UK99 471 aa20.65■□□□□ 0.9
E4F1-209ENST00000569796 ERICH2A1L162 156 aa20.64■□□□□ 0.9
E4F1-209ENST00000569796 ANKRD20A12PQ8NF67 263 aa20.64■□□□□ 0.9
E4F1-209ENST00000569796 CCDC43Q96MW1 224 aaKnown RBP20.64■□□□□ 0.9
E4F1-209ENST00000569796 TSPYL4Q9UJ04 414 aa20.64■□□□□ 0.89
E4F1-209ENST00000569796 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
E4F1-209ENST00000569796 HOOK1Q9UJC3 728 aaKnown RBP20.63■□□□□ 0.89
E4F1-209ENST00000569796 KRI1Q8N9T8 703 aaKnown RBP20.63■□□□□ 0.89
E4F1-209ENST00000569796 PDE4AP27815 886 aa20.63■□□□□ 0.89
E4F1-209ENST00000569796 FOSBP53539 338 aa20.62■□□□□ 0.89
E4F1-209ENST00000569796 RNF20Q5VTR2 975 aa20.62■□□□□ 0.89
E4F1-209ENST00000569796 NUTM2GQ5VZR2 741 aa20.62■□□□□ 0.89
E4F1-209ENST00000569796 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
E4F1-209ENST00000569796 AIMP1Q12904 312 aaKnown RBP20.62■□□□□ 0.89
E4F1-209ENST00000569796 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
E4F1-209ENST00000569796 DZIP1LQ8IYY4 767 aaKnown RBP20.62■□□□□ 0.89
E4F1-209ENST00000569796 TOP2AP11388 1531 aaKnown RBP20.61■□□□□ 0.89
E4F1-209ENST00000569796 FYB1O15117 783 aa20.61■□□□□ 0.89
E4F1-209ENST00000569796 HMOX1P09601 288 aa20.61■□□□□ 0.89
E4F1-209ENST00000569796 BICD2Q8TD16 824 aa20.61■□□□□ 0.89
E4F1-209ENST00000569796 NLRP2Q9NX02 1062 aa20.61■□□□□ 0.89
E4F1-209ENST00000569796 IPO7O95373 1038 aaKnown RBP20.61■□□□□ 0.89
E4F1-209ENST00000569796 PRKRIP1Q9H875 184 aaPredicted RBP20.6■□□□□ 0.89
E4F1-209ENST00000569796 FAM69CQ0P6D2 419 aa20.6■□□□□ 0.89
E4F1-209ENST00000569796 RIC3Q7Z5B4 369 aa20.6■□□□□ 0.89
E4F1-209ENST00000569796 NEUROD6Q96NK8 337 aa20.6■□□□□ 0.89
E4F1-209ENST00000569796 NOM1Q5C9Z4 860 aaKnown RBP20.59■□□□□ 0.89
E4F1-209ENST00000569796 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.59■□□□□ 0.89
E4F1-209ENST00000569796 CCDC27Q2M243 656 aa20.58■□□□□ 0.89
E4F1-209ENST00000569796 RRP12Q5JTH9 1297 aaKnown RBP20.58■□□□□ 0.89
E4F1-209ENST00000569796 VPS37CA5D8V6 355 aaPredicted RBP20.58■□□□□ 0.88
E4F1-209ENST00000569796 WASHC4Q2M389 1173 aa20.56■□□□□ 0.88
E4F1-209ENST00000569796 HSP90AB4PQ58FF6 505 aa20.56■□□□□ 0.88
E4F1-209ENST00000569796 RUNDC1Q96C34 613 aa20.55■□□□□ 0.88
E4F1-209ENST00000569796 WIZO95785 1651 aa20.55■□□□□ 0.88
E4F1-209ENST00000569796 MTMR7Q9Y216 660 aa20.54■□□□□ 0.88
E4F1-209ENST00000569796 GNAI1P63096 354 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms