RNA–Protein interactions for RNA: ENST00000569624.5

CDH11-217, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-217ENST00000569624 NOS1P29475 1434 aa20.39■□□□□ 0.85
CDH11-217ENST00000569624 AHDC1Q5TGY3 1603 aaPredicted RBP20.38■□□□□ 0.85
CDH11-217ENST00000569624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.38■□□□□ 0.85
CDH11-217ENST00000569624 NCOA3Q9Y6Q9 1424 aa20.37■□□□□ 0.85
CDH11-217ENST00000569624 MEX3CQ5U5Q3 659 aaKnown RBP20.37■□□□□ 0.85
CDH11-217ENST00000569624 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
CDH11-217ENST00000569624 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
CDH11-217ENST00000569624 ABCC5O15440 1437 aa20.36■□□□□ 0.85
CDH11-217ENST00000569624 RRP7BPQ9NSQ0 103 aa20.35■□□□□ 0.85
CDH11-217ENST00000569624 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
CDH11-217ENST00000569624 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
CDH11-217ENST00000569624 SLC52A1Q9NWF4 448 aa20.33■□□□□ 0.85
CDH11-217ENST00000569624 VPS8Q8N3P4 1428 aa20.33■□□□□ 0.84
CDH11-217ENST00000569624 BCANQ96GW7 911 aa20.32■□□□□ 0.84
CDH11-217ENST00000569624 MYO5BQ9ULV0 1848 aa20.32■□□□□ 0.84
CDH11-217ENST00000569624 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.31■□□□□ 0.84
CDH11-217ENST00000569624 RXRBP28702 533 aa20.31■□□□□ 0.84
CDH11-217ENST00000569624 DIP2AQ14689 1571 aa20.3■□□□□ 0.84
CDH11-217ENST00000569624 DAPK1P53355 1430 aa20.29■□□□□ 0.84
CDH11-217ENST00000569624 PTPN23Q9H3S7 1636 aa20.29■□□□□ 0.84
CDH11-217ENST00000569624 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
CDH11-217ENST00000569624 CADPS2Q86UW7 1296 aa20.28■□□□□ 0.84
CDH11-217ENST00000569624 RPRD2Q5VT52 1461 aaKnown RBP20.28■□□□□ 0.84
CDH11-217ENST00000569624 GCC2Q8IWJ2 1684 aa20.28■□□□□ 0.84
CDH11-217ENST00000569624 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.83
CDH11-217ENST00000569624 TBX22Q9Y458 520 aa20.26■□□□□ 0.83
CDH11-217ENST00000569624 TMEM131LA2VDJ0 1609 aa20.26■□□□□ 0.83
CDH11-217ENST00000569624 ANKRD30AQ9BXX3 1397 aa20.25■□□□□ 0.83
CDH11-217ENST00000569624 C19orf44Q9H6X5 657 aa20.25■□□□□ 0.83
CDH11-217ENST00000569624 PPP1R15AO75807 674 aaPredicted RBP20.24■□□□□ 0.83
CDH11-217ENST00000569624 HDGFP51858 240 aaKnown RBP20.24■□□□□ 0.83
CDH11-217ENST00000569624 C14orf37Q86TY3 774 aa20.24■□□□□ 0.83
CDH11-217ENST00000569624 ATF3P18847 181 aa20.23■□□□□ 0.83
CDH11-217ENST00000569624 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
CDH11-217ENST00000569624 ADAMTS13Q76LX8 1427 aa20.22■□□□□ 0.83
CDH11-217ENST00000569624 RGS12O14924 1447 aa20.21■□□□□ 0.83
CDH11-217ENST00000569624 AFF2P51816 1311 aa20.21■□□□□ 0.83
CDH11-217ENST00000569624 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
CDH11-217ENST00000569624 DCCP43146 1447 aa20.19■□□□□ 0.82
CDH11-217ENST00000569624 SETD5Q9C0A6 1442 aa20.19■□□□□ 0.82
CDH11-217ENST00000569624 NHSL1Q5SYE7 1610 aa20.19■□□□□ 0.82
CDH11-217ENST00000569624 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
CDH11-217ENST00000569624 NUTM2BA6NNL0 878 aaPredicted RBP20.18■□□□□ 0.82
CDH11-217ENST00000569624 NUTM2EB1AL46 878 aaPredicted RBP20.18■□□□□ 0.82
CDH11-217ENST00000569624 NUTM2AQ8IVF1 878 aaPredicted RBP20.18■□□□□ 0.82
CDH11-217ENST00000569624 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.18■□□□□ 0.82
CDH11-217ENST00000569624 ADGRL2O95490 1459 aa20.17■□□□□ 0.82
CDH11-217ENST00000569624 TRPM2O94759 1503 aa20.17■□□□□ 0.82
CDH11-217ENST00000569624 CHIC2Q9UKJ5 165 aa20.16■□□□□ 0.82
CDH11-217ENST00000569624 EP400Q96L91 3159 aa20.16■□□□□ 0.82
CDH11-217ENST00000569624 RBM6P78332 1123 aaKnown RBP20.14■□□□□ 0.81
CDH11-217ENST00000569624 MST1RQ04912 1400 aa20.11■□□□□ 0.81
CDH11-217ENST00000569624 PTPRUQ92729 1446 aa20.11■□□□□ 0.81
CDH11-217ENST00000569624 XRN1Q8IZH2 1706 aaKnown RBP20.11■□□□□ 0.81
CDH11-217ENST00000569624 QTRT2Q9H974 415 aaKnown RBP20.11■□□□□ 0.81
CDH11-217ENST00000569624 UNC13BO14795 1591 aa20.1■□□□□ 0.81
CDH11-217ENST00000569624 LRRC59Q96AG4 307 aaKnown RBP20.1■□□□□ 0.81
CDH11-217ENST00000569624 C8orf37Q96NL8 207 aa20.1■□□□□ 0.81
CDH11-217ENST00000569624 ANKRD50Q9ULJ7 1429 aa20.1■□□□□ 0.81
CDH11-217ENST00000569624 AMOTL2Q9Y2J4 779 aa20.09■□□□□ 0.81
CDH11-217ENST00000569624 ATAD2Q6PL18 1390 aa20.08■□□□□ 0.81
CDH11-217ENST00000569624 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.81
CDH11-217ENST00000569624 NUTM2DQ5VT03 806 aaPredicted RBP20.07■□□□□ 0.8
CDH11-217ENST00000569624 E9PCH4 1651 aa20.07■□□□□ 0.8
CDH11-217ENST00000569624 CHGAP10645 457 aaKnown RBP20.06■□□□□ 0.8
CDH11-217ENST00000569624 NRXN3Q9Y4C0 1643 aa20.05■□□□□ 0.8
CDH11-217ENST00000569624 NGLY1Q96IV0 654 aa20.05■□□□□ 0.8
CDH11-217ENST00000569624 FOXD1Q16676 465 aa20.04■□□□□ 0.8
CDH11-217ENST00000569624 SETBP1Q9Y6X0 1596 aa20.04■□□□□ 0.8
CDH11-217ENST00000569624 LAMC1P11047 1609 aa20.02■□□□□ 0.79
CDH11-217ENST00000569624 ADGRL3Q9HAR2 1447 aa20.02■□□□□ 0.79
CDH11-217ENST00000569624 ZRANB1Q9UGI0 708 aa20.01■□□□□ 0.79
CDH11-217ENST00000569624 IQGAP3Q86VI3 1631 aa20■□□□□ 0.79
CDH11-217ENST00000569624 NALCNQ8IZF0 1738 aa19.99■□□□□ 0.79
CDH11-217ENST00000569624 DDX17Q92841 729 aaKnown RBP19.98■□□□□ 0.79
CDH11-217ENST00000569624 APLP2Q06481 763 aa19.97■□□□□ 0.79
CDH11-217ENST00000569624 ADAMTS2O95450 1211 aa19.96■□□□□ 0.79
CDH11-217ENST00000569624 TRPC5Q9UL62 973 aaPredicted RBP19.96■□□□□ 0.79
CDH11-217ENST00000569624 PTCH1Q13635 1447 aa19.95■□□□□ 0.78
CDH11-217ENST00000569624 USP21Q9UK80 565 aa19.95■□□□□ 0.78
CDH11-217ENST00000569624 ATRNO75882 1429 aa19.94■□□□□ 0.78
CDH11-217ENST00000569624 C1orf167Q5SNV9 1468 aa19.94■□□□□ 0.78
CDH11-217ENST00000569624 METP08581 1390 aa19.94■□□□□ 0.78
CDH11-217ENST00000569624 FNBP4Q8N3X1 1017 aaPredicted RBP19.93■□□□□ 0.78
CDH11-217ENST00000569624 COL22A1Q8NFW1 1626 aaPredicted RBP19.92■□□□□ 0.78
CDH11-217ENST00000569624 CCDC125Q86Z20 511 aa19.92■□□□□ 0.78
CDH11-217ENST00000569624 LOC105371045A0A1W2PR82 267 aa19.91■□□□□ 0.78
CDH11-217ENST00000569624 SOS2Q07890 1332 aaPredicted RBP19.91■□□□□ 0.78
CDH11-217ENST00000569624 FAM50AQ14320 339 aaKnown RBP19.9■□□□□ 0.78
CDH11-217ENST00000569624 SPHKAPQ2M3C7 1700 aa19.88■□□□□ 0.77
CDH11-217ENST00000569624 MYOM2P54296 1465 aa19.86■□□□□ 0.77
CDH11-217ENST00000569624 MARF1Q9Y4F3 1742 aaKnown RBP19.86■□□□□ 0.77
CDH11-217ENST00000569624 ROCK1Q13464 1354 aa19.85■□□□□ 0.77
CDH11-217ENST00000569624 BCL9LQ86UU0 1499 aa19.85■□□□□ 0.77
CDH11-217ENST00000569624 NUP155O75694 1391 aa19.84■□□□□ 0.77
CDH11-217ENST00000569624 NEXMIFQ5QGS0 1516 aa19.84■□□□□ 0.77
CDH11-217ENST00000569624 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.83■□□□□ 0.77
CDH11-217ENST00000569624 ZNF326Q5BKZ1 582 aaKnown RBP19.82■□□□□ 0.76
CDH11-217ENST00000569624 ORAI2Q96SN7 254 aa19.82■□□□□ 0.76
CDH11-217ENST00000569624 LRP5O75197 1615 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms