RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 PLA2R1Q13018 1463 aa7.89□□□□□ -1.15
CDH13-213ENST00000569454 SPDYE2BA6NHP3 402 aa7.89□□□□□ -1.15
CDH13-213ENST00000569454 SPDYE6P0CI01 402 aa7.89□□□□□ -1.15
CDH13-213ENST00000569454 SPDYE2Q495Y8 402 aa7.89□□□□□ -1.15
CDH13-213ENST00000569454 ERICH6Q7L0X2 663 aa7.89□□□□□ -1.15
CDH13-213ENST00000569454 CARD11Q9BXL7 1154 aa7.89□□□□□ -1.15
CDH13-213ENST00000569454 LTBP4Q8N2S1 1624 aa7.89□□□□□ -1.15
CDH13-213ENST00000569454 RNF17Q9BXT8 1623 aaKnown RBP7.89□□□□□ -1.15
CDH13-213ENST00000569454 A2MP01023 1474 aa7.88□□□□□ -1.15
CDH13-213ENST00000569454 PTPRTO14522 1441 aa7.88□□□□□ -1.15
CDH13-213ENST00000569454 SCAPERQ9BY12 1400 aa7.88□□□□□ -1.15
CDH13-213ENST00000569454 PRKRIP1Q9H875 184 aaPredicted RBP7.88□□□□□ -1.15
CDH13-213ENST00000569454 LMTK2Q8IWU2 1503 aa7.88□□□□□ -1.15
CDH13-213ENST00000569454 NEO1Q92859 1461 aa7.87□□□□□ -1.15
CDH13-213ENST00000569454 DHX29Q7Z478 1369 aaKnown RBP7.87□□□□□ -1.15
CDH13-213ENST00000569454 CEP152O94986 1710 aa7.87□□□□□ -1.15
CDH13-213ENST00000569454 SPHKAPQ2M3C7 1700 aa7.87□□□□□ -1.15
CDH13-213ENST00000569454 BCORL1Q5H9F3 1711 aa7.87□□□□□ -1.15
CDH13-213ENST00000569454 SENP3-EIF4A1A0A087X0R7 540 aa7.87□□□□□ -1.15
CDH13-213ENST00000569454 MLH3Q9UHC1 1453 aa7.87□□□□□ -1.15
CDH13-213ENST00000569454 POGZQ7Z3K3 1410 aa7.86□□□□□ -1.15
CDH13-213ENST00000569454 E9PCH4 1651 aa7.86□□□□□ -1.15
CDH13-213ENST00000569454 NEFLP07196 543 aa7.86□□□□□ -1.15
CDH13-213ENST00000569454 HSPA2P54652 639 aa7.86□□□□□ -1.15
CDH13-213ENST00000569454 ZNF326Q5BKZ1 582 aaKnown RBP7.86□□□□□ -1.15
CDH13-213ENST00000569454 SPDYE1Q8NFV5 336 aaPredicted RBP7.86□□□□□ -1.15
CDH13-213ENST00000569454 DCAF11Q8TEB1 546 aa7.86□□□□□ -1.15
CDH13-213ENST00000569454 EFCAB6Q5THR3 1501 aa7.86□□□□□ -1.15
CDH13-213ENST00000569454 COL17A1Q9UMD9 1497 aaPredicted RBP7.85□□□□□ -1.15
CDH13-213ENST00000569454 MROH1Q8NDA8 1641 aa7.85□□□□□ -1.15
CDH13-213ENST00000569454 KIAA1210Q9ULL0 1709 aa7.84□□□□□ -1.15
CDH13-213ENST00000569454 MYOM2P54296 1465 aa7.84□□□□□ -1.15
CDH13-213ENST00000569454 C11orf95C9JLR9 678 aaPredicted RBP7.84□□□□□ -1.15
CDH13-213ENST00000569454 RBM33Q96EV2 1170 aaKnown RBP7.84□□□□□ -1.15
CDH13-213ENST00000569454 PLSCR2Q9NRY7 297 aa7.84□□□□□ -1.15
CDH13-213ENST00000569454 MADDQ8WXG6 1647 aa7.84□□□□□ -1.15
CDH13-213ENST00000569454 CD109Q6YHK3 1445 aa7.84□□□□□ -1.15
CDH13-213ENST00000569454 KIDINS220Q9ULH0 1771 aa7.84□□□□□ -1.15
CDH13-213ENST00000569454 WASHC2CQ9Y4E1 1318 aa7.83□□□□□ -1.16
CDH13-213ENST00000569454 AFAP1Q8N556 730 aa7.83□□□□□ -1.16
CDH13-213ENST00000569454 EIF3AQ14152 1382 aaKnown RBP7.83□□□□□ -1.16
CDH13-213ENST00000569454 CLTCL1P53675 1640 aa7.82□□□□□ -1.16
CDH13-213ENST00000569454 MRS2Q9HD23 443 aa7.82□□□□□ -1.16
CDH13-213ENST00000569454 RTN4Q9NQC3 1192 aaKnown RBP7.82□□□□□ -1.16
CDH13-213ENST00000569454 SUPT16HQ9Y5B9 1047 aaKnown RBP7.82□□□□□ -1.16
CDH13-213ENST00000569454 ZBED9Q6R2W3 1325 aa7.81□□□□□ -1.16
CDH13-213ENST00000569454 GLI2P10070 1586 aa7.81□□□□□ -1.16
CDH13-213ENST00000569454 CLCN6P51797 869 aa7.81□□□□□ -1.16
CDH13-213ENST00000569454 HNRNPUQ00839 825 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDH13-213ENST00000569454 RALBP1Q15311 655 aa7.81□□□□□ -1.16
CDH13-213ENST00000569454 CDCA8Q53HL2 280 aa7.81□□□□□ -1.16
CDH13-213ENST00000569454 FOXD4L1Q9NU39 408 aa7.81□□□□□ -1.16
CDH13-213ENST00000569454 RGS17Q9UGC6 210 aaPredicted RBP7.81□□□□□ -1.16
CDH13-213ENST00000569454 KDM2AQ9Y2K7 1162 aa7.81□□□□□ -1.16
CDH13-213ENST00000569454 IQGAP1P46940 1657 aa7.81□□□□□ -1.16
CDH13-213ENST00000569454 ZMYM4Q5VZL5 1548 aa7.81□□□□□ -1.16
CDH13-213ENST00000569454 SCAF11Q99590 1463 aaKnown RBP7.81□□□□□ -1.16
CDH13-213ENST00000569454 ZC3H13Q5T200 1668 aaKnown RBP7.8□□□□□ -1.16
CDH13-213ENST00000569454 ST20-MTHFSA0A0A6YYL1 179 aa7.8□□□□□ -1.16
CDH13-213ENST00000569454 ERICH6BQ5W0A0 696 aa7.8□□□□□ -1.16
CDH13-213ENST00000569454 UPF1Q92900 1129 aaKnown RBP eCLIP7.8□□□□□ -1.16
CDH13-213ENST00000569454 BRD4O60885 1362 aaPredicted RBP7.8□□□□□ -1.16
CDH13-213ENST00000569454 INSRP06213 1382 aa7.8□□□□□ -1.16
CDH13-213ENST00000569454 PPRC1Q5VV67 1664 aaKnown RBP7.79□□□□□ -1.16
CDH13-213ENST00000569454 ADGRB3O60242 1522 aa7.79□□□□□ -1.16
CDH13-213ENST00000569454 MAP3K4Q9Y6R4 1608 aa7.79□□□□□ -1.16
CDH13-213ENST00000569454 KIF3BO15066 747 aa7.79□□□□□ -1.16
CDH13-213ENST00000569454 TMF1P82094 1093 aa7.79□□□□□ -1.16
CDH13-213ENST00000569454 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
CDH13-213ENST00000569454 FRMPD1Q5SYB0 1578 aa7.79□□□□□ -1.16
CDH13-213ENST00000569454 MYBBP1AQ9BQG0 1328 aaKnown RBP7.78□□□□□ -1.16
CDH13-213ENST00000569454 KIF1BO60333 1816 aa7.78□□□□□ -1.16
CDH13-213ENST00000569454 PRKCSHP14314 528 aaPredicted RBP7.78□□□□□ -1.16
CDH13-213ENST00000569454 HSPA1LP34931 641 aa7.78□□□□□ -1.16
CDH13-213ENST00000569454 RGL3Q3MIN7 710 aa7.78□□□□□ -1.16
CDH13-213ENST00000569454 CLEC11AQ9Y240 323 aa7.78□□□□□ -1.16
CDH13-213ENST00000569454 ABCA6Q8N139 1617 aa7.78□□□□□ -1.16
CDH13-213ENST00000569454 SYNMO15061 1565 aa7.77□□□□□ -1.17
CDH13-213ENST00000569454 SETBP1Q9Y6X0 1596 aa7.77□□□□□ -1.17
CDH13-213ENST00000569454 NRXN1Q9ULB1 1477 aa7.77□□□□□ -1.17
CDH13-213ENST00000569454 IFT172Q9UG01 1749 aa7.77□□□□□ -1.17
CDH13-213ENST00000569454 ABCC3O15438 1527 aa7.77□□□□□ -1.17
CDH13-213ENST00000569454 ARHGAP31Q2M1Z3 1444 aa7.77□□□□□ -1.17
CDH13-213ENST00000569454 DIP2CQ9Y2E4 1556 aa7.76□□□□□ -1.17
CDH13-213ENST00000569454 PARD3Q8TEW0 1356 aa7.76□□□□□ -1.17
CDH13-213ENST00000569454 SBNO2Q9Y2G9 1366 aa7.76□□□□□ -1.17
CDH13-213ENST00000569454 RICTORQ6R327 1708 aa7.76□□□□□ -1.17
CDH13-213ENST00000569454 AMER1Q5JTC6 1135 aaPredicted RBP7.76□□□□□ -1.17
CDH13-213ENST00000569454 TESK2Q96S53 571 aa7.76□□□□□ -1.17
CDH13-213ENST00000569454 RPGRIP1LQ68CZ1 1315 aa7.76□□□□□ -1.17
CDH13-213ENST00000569454 PTPRMP28827 1452 aa7.75□□□□□ -1.17
CDH13-213ENST00000569454 CAMSAP1Q5T5Y3 1602 aa7.75□□□□□ -1.17
CDH13-213ENST00000569454 MYO3AQ8NEV4 1616 aa7.75□□□□□ -1.17
CDH13-213ENST00000569454 UBAP1LF5GYI3 381 aa7.75□□□□□ -1.17
CDH13-213ENST00000569454 NLRP13Q86W25 1043 aa7.75□□□□□ -1.17
CDH13-213ENST00000569454 POLR3GLQ9BT43 218 aa7.75□□□□□ -1.17
CDH13-213ENST00000569454 NPATQ14207 1427 aa7.75□□□□□ -1.17
CDH13-213ENST00000569454 REREQ9P2R6 1566 aa7.75□□□□□ -1.17
CDH13-213ENST00000569454 LRPPRCP42704 1394 aaKnown RBP7.74□□□□□ -1.17
CDH13-213ENST00000569454 NPC1L1Q9UHC9 1359 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms