RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	LRRIQ1	Q96JM4	1722 aa		10.33	□□□□□ -0.76
BBS4-218	ENST00000569440	FOXD4L1	Q9NU39	408 aa		10.32	□□□□□ -0.76
BBS4-218	ENST00000569440	NCOA3	Q9Y6Q9	1424 aa		10.32	□□□□□ -0.76
BBS4-218	ENST00000569440	TET3	O43151	1660 aa		10.31	□□□□□ -0.76
BBS4-218	ENST00000569440	TIAM1	Q13009	1591 aa		10.31	□□□□□ -0.76
BBS4-218	ENST00000569440	RSPH4A	Q5TD94	716 aa		10.31	□□□□□ -0.76
BBS4-218	ENST00000569440	C8orf37	Q96NL8	207 aa		10.31	□□□□□ -0.76
BBS4-218	ENST00000569440	UBR1	Q8IWV7	1749 aa		10.3	□□□□□ -0.76
BBS4-218	ENST00000569440	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.3	□□□□□ -0.76
BBS4-218	ENST00000569440	ZBTB22	O15209	634 aa		10.3	□□□□□ -0.76
BBS4-218	ENST00000569440	IFFO2	Q5TF58	517 aa		10.3	□□□□□ -0.76
BBS4-218	ENST00000569440	CADPS2	Q86UW7	1296 aa		10.3	□□□□□ -0.76
BBS4-218	ENST00000569440	CAMSAP2	Q08AD1	1489 aa		10.3	□□□□□ -0.76
BBS4-218	ENST00000569440	BRINP3	Q76B58	766 aa		10.29	□□□□□ -0.76
BBS4-218	ENST00000569440	SHPRH	Q149N8	1683 aa		10.28	□□□□□ -0.76
BBS4-218	ENST00000569440	DIP2A	Q14689	1571 aa		10.28	□□□□□ -0.76
BBS4-218	ENST00000569440	NWD1	Q149M9	1564 aa		10.28	□□□□□ -0.76
BBS4-218	ENST00000569440	SETD5	Q9C0A6	1442 aa		10.28	□□□□□ -0.76
BBS4-218	ENST00000569440	C19orf44	Q9H6X5	657 aa		10.28	□□□□□ -0.76
BBS4-218	ENST00000569440	ARHGAP31	Q2M1Z3	1444 aa		10.27	□□□□□ -0.77
BBS4-218	ENST00000569440	LRRC59	Q96AG4	307 aa	Known RBP	10.27	□□□□□ -0.77
BBS4-218	ENST00000569440	CCDC141	Q6ZP82	1450 aa		10.26	□□□□□ -0.77
BBS4-218	ENST00000569440	ATF3	P18847	181 aa		10.26	□□□□□ -0.77
BBS4-218	ENST00000569440	C1QBP	Q07021	282 aa	Known RBP	10.26	□□□□□ -0.77
BBS4-218	ENST00000569440	IDI1	Q13907	227 aa		10.26	□□□□□ -0.77
BBS4-218	ENST00000569440	STAG3	Q9UJ98	1225 aa		10.26	□□□□□ -0.77
BBS4-218	ENST00000569440	TRPC5	Q9UL62	973 aa	Predicted RBP	10.25	□□□□□ -0.77
BBS4-218	ENST00000569440	TSPY4	P0CV99	314 aa		10.24	□□□□□ -0.77
BBS4-218	ENST00000569440	TSPY10	P0CW01	314 aa		10.24	□□□□□ -0.77
BBS4-218	ENST00000569440	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.24	□□□□□ -0.77
BBS4-218	ENST00000569440	USP21	Q9UK80	565 aa		10.24	□□□□□ -0.77
BBS4-218	ENST00000569440	FYCO1	Q9BQS8	1478 aa		10.23	□□□□□ -0.77
BBS4-218	ENST00000569440	LRP5	O75197	1615 aa		10.23	□□□□□ -0.77
BBS4-218	ENST00000569440	YY1	P25490	414 aa		10.23	□□□□□ -0.77
BBS4-218	ENST00000569440	C14orf37	Q86TY3	774 aa		10.23	□□□□□ -0.77
BBS4-218	ENST00000569440	TBX22	Q9Y458	520 aa		10.23	□□□□□ -0.77
BBS4-218	ENST00000569440	PNPLA6	Q8IY17	1366 aa		10.23	□□□□□ -0.77
BBS4-218	ENST00000569440	MAST1	Q9Y2H9	1570 aa		10.22	□□□□□ -0.77
BBS4-218	ENST00000569440	KDM5A	P29375	1690 aa	Known RBP	10.22	□□□□□ -0.77
BBS4-218	ENST00000569440	HRC	P23327	699 aa		10.22	□□□□□ -0.77
BBS4-218	ENST00000569440	DEFB132	Q7Z7B7	95 aa		10.22	□□□□□ -0.77
BBS4-218	ENST00000569440	MTUS2	Q5JR59	1369 aa		10.22	□□□□□ -0.77
BBS4-218	ENST00000569440	ADAMTS2	O95450	1211 aa		10.21	□□□□□ -0.77
BBS4-218	ENST00000569440	MYCN	P04198	464 aa	Predicted RBP	10.21	□□□□□ -0.77
BBS4-218	ENST00000569440	CACNB1	Q02641	598 aa	Predicted RBP	10.21	□□□□□ -0.77
BBS4-218	ENST00000569440	BCAN	Q96GW7	911 aa		10.21	□□□□□ -0.77
BBS4-218	ENST00000569440	ATRN	O75882	1429 aa		10.21	□□□□□ -0.78
BBS4-218	ENST00000569440	BLM	P54132	1417 aa	Predicted RBP	10.21	□□□□□ -0.78
BBS4-218	ENST00000569440	EFCAB6	Q5THR3	1501 aa		10.21	□□□□□ -0.78
BBS4-218	ENST00000569440	MROH1	Q8NDA8	1641 aa		10.19	□□□□□ -0.78
BBS4-218	ENST00000569440	PLEKHG1	Q9ULL1	1385 aa		10.19	□□□□□ -0.78
BBS4-218	ENST00000569440	PIK3C2B	O00750	1634 aa		10.18	□□□□□ -0.78
BBS4-218	ENST00000569440	CEP162	Q5TB80	1403 aa		10.17	□□□□□ -0.78
BBS4-218	ENST00000569440	EP400	Q96L91	3159 aa		10.17	□□□□□ -0.78
BBS4-218	ENST00000569440	PSD	A5PKW4	1024 aa	Predicted RBP	10.17	□□□□□ -0.78
BBS4-218	ENST00000569440	DDX17	Q92841	729 aa	Known RBP	10.17	□□□□□ -0.78
BBS4-218	ENST00000569440	ASXL1	Q8IXJ9	1541 aa		10.17	□□□□□ -0.78
BBS4-218	ENST00000569440	BCL9L	Q86UU0	1499 aa		10.17	□□□□□ -0.78
BBS4-218	ENST00000569440	NHSL1	Q5SYE7	1610 aa		10.16	□□□□□ -0.78
BBS4-218	ENST00000569440	GJD4	Q96KN9	370 aa	Predicted RBP	10.16	□□□□□ -0.78
BBS4-218	ENST00000569440	SLC52A1	Q9NWF4	448 aa		10.16	□□□□□ -0.78
BBS4-218	ENST00000569440	ZFYVE9	O95405	1425 aa		10.16	□□□□□ -0.78
BBS4-218	ENST00000569440	DCC	P43146	1447 aa		10.16	□□□□□ -0.78
BBS4-218	ENST00000569440	HDGF	P51858	240 aa	Known RBP	10.15	□□□□□ -0.78
BBS4-218	ENST00000569440	MST1R	Q04912	1400 aa		10.15	□□□□□ -0.79
BBS4-218	ENST00000569440	PIK3R4	Q99570	1358 aa		10.14	□□□□□ -0.79
BBS4-218	ENST00000569440	PPP1R15A	O75807	674 aa	Predicted RBP	10.14	□□□□□ -0.79
BBS4-218	ENST00000569440	SF3B2	Q13435	895 aa	Known RBP	10.14	□□□□□ -0.79
BBS4-218	ENST00000569440	PTCH1	Q13635	1447 aa		10.14	□□□□□ -0.79
BBS4-218	ENST00000569440	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.13	□□□□□ -0.79
BBS4-218	ENST00000569440	AMOTL2	Q9Y2J4	779 aa		10.13	□□□□□ -0.79
BBS4-218	ENST00000569440	NOS1	P29475	1434 aa		10.13	□□□□□ -0.79
BBS4-218	ENST00000569440	ADAMTS13	Q76LX8	1427 aa		10.13	□□□□□ -0.79
BBS4-218	ENST00000569440	ARHGEF5	Q12774	1597 aa		10.13	□□□□□ -0.79
BBS4-218	ENST00000569440	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.12	□□□□□ -0.79
BBS4-218	ENST00000569440	SOS2	Q07890	1332 aa	Predicted RBP	10.11	□□□□□ -0.79
BBS4-218	ENST00000569440	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.11	□□□□□ -0.79
BBS4-218	ENST00000569440	RIMS2	Q9UQ26	1411 aa		10.1	□□□□□ -0.79
BBS4-218	ENST00000569440	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
BBS4-218	ENST00000569440	ADGRB3	O60242	1522 aa		10.1	□□□□□ -0.79
BBS4-218	ENST00000569440	CHD2	O14647	1828 aa	Known RBP	10.1	□□□□□ -0.79
BBS4-218	ENST00000569440	PTPRU	Q92729	1446 aa		10.09	□□□□□ -0.79
BBS4-218	ENST00000569440	EHBP1L1	Q8N3D4	1523 aa		10.08	□□□□□ -0.8
BBS4-218	ENST00000569440	DUOX2	Q9NRD8	1548 aa		10.08	□□□□□ -0.8
BBS4-218	ENST00000569440	R3HDM1	Q15032	1099 aa	Known RBP	10.08	□□□□□ -0.8
BBS4-218	ENST00000569440	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.08	□□□□□ -0.8
BBS4-218	ENST00000569440	LMTK2	Q8IWU2	1503 aa		10.07	□□□□□ -0.8
BBS4-218	ENST00000569440	CEP152	O94986	1710 aa		10.07	□□□□□ -0.8
BBS4-218	ENST00000569440	KANK1	Q14678	1352 aa		10.07	□□□□□ -0.8
BBS4-218	ENST00000569440	SENP3-EIF4A1	A0A087X0R7	540 aa		10.07	□□□□□ -0.8
BBS4-218	ENST00000569440	ONECUT3	O60422	494 aa	Predicted RBP	10.07	□□□□□ -0.8
BBS4-218	ENST00000569440	BAG6	P46379	1132 aa		10.07	□□□□□ -0.8
BBS4-218	ENST00000569440	SEPT12	Q8IYM1	358 aa		10.07	□□□□□ -0.8
BBS4-218	ENST00000569440	UNC5CL	Q8IV45	518 aa		10.06	□□□□□ -0.8
BBS4-218	ENST00000569440	ERBIN	Q96RT1	1412 aa		10.06	□□□□□ -0.8
BBS4-218	ENST00000569440	UNC13B	O14795	1591 aa		10.05	□□□□□ -0.8
BBS4-218	ENST00000569440	MYOM2	P54296	1465 aa		10.05	□□□□□ -0.8
BBS4-218	ENST00000569440	RALGAPB	Q86X10	1494 aa		10.05	□□□□□ -0.8
BBS4-218	ENST00000569440	KIF15	Q9NS87	1388 aa		10.05	□□□□□ -0.8
BBS4-218	ENST00000569440	CAPN15	O75808	1086 aa		10.05	□□□□□ -0.8

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